Array 1 24915-27128 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMTC010000002.1 Streptococcus oralis strain 1001095IJ_161003_A5 NODE_2_length_142646_cov_30.8898, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 24915 36 100.0 30 .................................... CTTACTTTTTTTTTTCAAAAAAAAATAAAA 24981 36 100.0 30 .................................... AGTACGCTAAATTATTTTTCGCAAATGGTA 25047 36 100.0 30 .................................... TGAACGCTTTAAGATTAAAGAAAATCTAAT 25113 36 100.0 30 .................................... GAACGTTTCAGGAAGATAATCTGCATATGG 25179 36 100.0 30 .................................... AACTAATCAACAGGCGCCAACGTCAAATTT 25245 36 100.0 30 .................................... GCTTCAGGACTTTCAAAAAAGCTATGAACG 25311 36 100.0 30 .................................... TACAAGAAAAGTATTTCACGCTTTGGCTTC 25377 36 100.0 30 .................................... GCAGATAGTCAAGAAGCTAACAATGTAACC 25443 36 100.0 30 .................................... ATAAAAACAAAGAGGTAAACAAAATGCTAA 25509 36 100.0 30 .................................... TATAACCCATCATTAACAACGCCAGGAATA 25575 36 100.0 30 .................................... CCAAAAACTTATTGGCTAACAGGTCAGAAT 25641 36 100.0 30 .................................... AGCTTTTGAGCATTGGGTGGATGTAACTTA 25707 36 100.0 30 .................................... GTCGAGTCTATTCTTGTCCTGTACGGAGCG 25773 36 100.0 30 .................................... TTGGTTTGGTGAGCGCTGGGCCGAAGTGAC 25839 36 100.0 30 .................................... TTGGGAGTTGGCGCATTGTTCATCGGATTT 25905 36 100.0 30 .................................... TCTTAACTGGATTGTTAGATTTAACAGTAG 25971 36 100.0 30 .................................... TTCTACAAATGGAAAAACTTAGTGACGAAG 26037 36 100.0 30 .................................... GAAAGACCTTCGAACTCGTCCAAGTAGTAA 26103 36 100.0 30 .................................... ACATCTGAGAGGTCAACGGTAACTTGTCAA 26169 36 100.0 30 .................................... TAGACTCGACTACCGTACTGAACTTATCTT 26235 36 100.0 30 .................................... CTGAGTCTCAACTAAAGATGTTCAGGAACC 26301 36 100.0 30 .................................... CAATTTGAATTCGACCGAAATAACCCCAAT 26367 36 100.0 30 .................................... GCTACGGAAATTGTCTGCTCAGGCCAGAAG 26433 36 100.0 30 .................................... CTTATTGAACATCAACGCGATAAACTCAGC 26499 36 100.0 30 .................................... GTATTTTCACAAAGAATACACAAAATTTTC 26565 36 100.0 30 .................................... CGTTGTAGATTCACTGATAAAGTAATCAGC 26631 36 100.0 30 .................................... TTTGCGAACATTTTTTGATGGACTTTAAAA 26697 36 100.0 30 .................................... CGAACAATCGGAGCAAGTGATGATGACATG 26763 36 100.0 30 .................................... TTTGCGAACATTTTTTGATGGACTTTAAAA 26829 36 100.0 30 .................................... CGAACAATCGGAGCAAGTGATGATGACATG 26895 36 100.0 30 .................................... TTTGCGAACATTTTTTGATGGACTTTAAAA 26961 36 100.0 30 .................................... CTATCCATCAAAGAAATATCCATATCGTCA 27027 36 100.0 30 .................................... TAGGGTTGAGTCCAAAAATTGTTCGAACAA 27093 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 34 36 99.9 30 GTTTTAGAGCTGTGTTGTTTCTAATGGTTCCAAAAC # Left flank : ATCAGCTCAATGACAAACCCGAAGTCAAGTCCATGATTGAAAAGTTGGTTGCTACGATTACAGAATTGCTGGCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATCACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACTCTGAGTGATACACCTTTTGAAAAGATGCTAGAGATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTCATCAATGCATCAGCCTATCTATCAAAGGATGAGTTAGTAAATCTGATAGAGTATATCCAACTAAATCAACTAAGGGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTAACGAGCTGAAGTCAGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATCTTTCTACGAG # Right flank : AAGCTACTCATTTTTTGAGTAGCTTTTTAACTATTCCAACTCTACACATAGCTCATTCCTTTATAGAAAAGGAAAACGGCTAGTGCGATAAAAAATAGGGCTGCTCCGATTCGCTGGCTGGTACTATACATCCTTTTTTCCCATTTGACTGGAAAGATGATTGCTAGAAAGGCCCCACCTACTGCGCCGCCAATATGCCCTGCTAGGCTGATTCCTGGGATCAGAACACTTCCAATGATATTTATCACAAAAAGCGTCAGGTAGGATTGCCCTAACTGCTGGATATAGGGGTTGCGAGTTGCGTAGCGCAAAACAATAATCGTAGCAAATAGTCCGTAAAGAGAAGTGGATGCTCCTGCTGCAAGGACTTTCGGTGTAAAAGCAAACACAAAGAGATTGCCCATCATTCCTGATAAGAGATAGAGAAAGAAGAACTGCTTAGAGCCGAAAATCTCCTCCACCTGTCGTCCAAGAAAGTAGAGAGAAAGCATATTGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCTAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //