Array 1 19634-20658 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJBLZ010000004.1 [Ruminococcus] gnavus strain MSK.7.5 ILFIIKCM_4, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     19634	    32	 100.0	    35	................................	CAAAGGAGTACGATACCCTGCAGTATTCAAACAGT 	
     19701	    32	 100.0	    34	................................	TATGTGTTAATATAGAAAATGCAAGGAGGAAGCA  	
     19767	    32	 100.0	    34	................................	CGGAAGATTTTGTTACGGTGTAAGTAGCGACTTT  	
     19833	    32	 100.0	    33	................................	TTGAACAAATCCAGACCATGTCCCACCAATCGT   	
     19898	    32	 100.0	    35	................................	ATGATATGTGATATCCGGAAGTTGCAGGTAGTCCT 	
     19965	    32	 100.0	    33	................................	CGCAGAAAGTACAGGAAGGCGTGCAGGCGATCG   	
     20030	    32	 100.0	    33	................................	TACAACTGAAACAACTATAAAAAAACTTACAGA   	
     20095	    32	 100.0	    35	................................	ACTGATGAGACAGATACTATTATCACCGGAGTGTT 	
     20162	    32	 100.0	    36	................................	CCGTAATGCATCTACTGAAACTCCACAGGCATTGCA	
     20230	    32	 100.0	    36	................................	ACAAATTTAATTCGCTCGGATGTGGTGTCTACTTCA	
     20298	    32	 100.0	    34	................................	TCCTTTAACGCATAATAAAAGCACCCATCTCTGG  	
     20364	    32	 100.0	    34	................................	CTTGGAAGTATCTTGTGACAATCGATACACTGTT  	
     20430	    32	 100.0	    34	................................	CGTACAAACGGCAGGATTCGACCATCCTCCAGCT  	
     20496	    32	 100.0	    34	................................	GCGATATCATCTGCCATGCTACTGCCGCCGGAAT  	
     20562	    32	 100.0	    33	................................	CAGGCGGGACTTTCGGATAATTGGATCCATTAA   	
     20627	    31	  90.6	     0	........................-.G..T..	|                                   	T [20655]
==========	======	======	======	================================	====================================	==================
        16	    32	  99.4	    34	GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT	                                    	       

# Left flank :   TCCGGTATTTCTCTGGAAATGAGGCGAAAATGGGATGTTAGTGTTGATTACATATGATGTGAACACAGAAACAGCGGCTGGAAAGAGGAGATTGCGCCAAGTGGCAAAACAGTGTGTAAATTATGGGAGAAGAGTGCAAAATTCTGTATTCGAATGTATCTTAGATAATGCACAGTGTGTTATGCTTAAGGCAAAACTGACAGATATCATCGATGAAGAAGTTGATAGTTTGAGATTTTATTACTTGGGAAATCAATATAAAACAAAAGTCGAACATGTTGGTGTAGACAGAGGAATTTCGGCGGATGGAATTCTTATTATGTAACTGGGGTGCGGATGATAAGCAAACATAAAAATGCTGGGAGATTCGCACCAAAAAAAATGCACAAAAATTAGTTGAAGAGGTGAAAGTTAGAGAAATATGATGAGGAAAAGAGAATGATATTGGTAGAATTGAGTAATATTAAAGAATATAAAGCCTAAAATTAGGCAAAATTGCT
# Right flank :  TGTGGTGGACGGGCTGCCGGAAGATGCCGATGATTTCCGGTATCCGGGAGATGCGATCGAACCGGAAATACAATCGGAGTTGGAGCGTGCATTAAGCGGGGAAACGGTATTGCCGGAGAAGATTCTGGATACAGACTGGGGAAATATTTTTATTGCTTATTATCCGTTGCATAATGAATCAGGAGAAGTCGTCGGTGCACTTGGAATAGAAGTTGCGGCAGATATAGAAGCCGAGGCGGTACATGACAAATCCATTATACAGAGACATGGCAAATACTGATTTTATGACAGAACTAAAGAACAGAAATTCTTATGAGACAGACCGGCAGAACCTGGATGCAAAGAAGAAATGGAATGGCCTGACAGTGGCAGTGATCGATGTGAACAATCTGAAGCTGGTAAATGATCGGCTGGGGCATGCTGTGGGTGATGATTGTATTGTGAATGCAGCACGGGTCCTGCAGAGTGTTGAATCTCAAAAAGTTACGGCGTATCGATAC

# Questionable array : NO	 Score: 9.23
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-5.00,-5.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [75.0-40.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.68,0.74   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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