Array 1 530-126 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOH010000014.1 Coleofasciculus sp. FACHB-129 contig14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 529 37 100.0 38 ..................................... CAATATGTAGGCACCACAGAACGCCGTTGGGTACTTAA 454 37 100.0 36 ..................................... ACAAAAAGTTTACTTATGAAGAGCTTGCCGATTTAA 381 37 100.0 36 ..................................... CCTGCCCGCGAACGCAAGCTACCCACCACCAAGCCC 308 37 100.0 38 ..................................... ATATTTTTCACTGGTTATTGCCAGTGGGTGCCGATCGA 233 37 100.0 34 ..................................... AAGTTGTTATCGGACATTCGGACGTATATGTATT 162 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 100.0 37 GTTTCAACGACCATCCCAACTAGGGGTGGTTTGAAAG # Left flank : GGGATTGCTAGTGCTATTTGCCCTGATGGGATTACAGATCGTCCTATCGCCGACTCGGTGGCTCGCAGCGGTGGGAACAGCCGCCGCAGGATGCGCGATCGCGTTTTTAACAGGAGTCTGGTTTCACCGCCAGCTAGGCGGTCATACCGGCGATACCTACGGAGCAGTTGTAGAGTGGACAGAAGCTTTGTTATTGTGCGCGATCGCTAGCCTCTACTCTCACTTTTCCGGCTAAGTTCTCTGTCGCAAGTTGCCAAGCCTTACATAGAAATTCCAATTTCAGCCAACGGCGTCAGAAAACTTGAATCCCAATTGAGGTTTTTTTCGATATTCCAAGTCCCCTTGTAAAAATGCCTGCCACTGCCTCAACTGCCCAAGCCACTGCGAATCATTTCGGCAAATTGGATGATTTAGCCTTAACGACATCCCTAATTGTCAAAGCGACATTCATCTATCAACGATGACATTTAATGAGTCACTGTACAGAATGCGTCTGCTAC # Right flank : GGGTAAAGGATTTGGTAGTGCTAAAGATGTAAGGATGCATTGTAGTGGTGAACGAAGTACCAAATTGCCCCGATATGGTTCTCCAACTTCTAAGAATTCGATAACGTCTTCCTCACTAAACGCGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACGACCATCCCAACTAGGGGTGGTTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-14.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 84055-83142 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOH010000017.1 Coleofasciculus sp. FACHB-129 contig17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 84054 37 100.0 34 ..................................... AACTGCTCTGACTTTTCAAGACGCTTGAAACTAC 83983 37 100.0 39 ..................................... TGTACAAGAGGAGGATTCCCGCGATCGCGAGAATGTAGA 83907 37 100.0 37 ..................................... AAAAACAAGTGAGTGTCGCCCACTACTATATTCAAAA 83833 37 100.0 37 ..................................... TTTAAAAAAAAATCTCAATCTGGCGCTCCAGATTGAG 83759 37 97.3 35 ...........T......................... GAACCAGATGATGATGTTCGGTGGCTTGCCAAGGA 83687 37 100.0 35 ..................................... ATACCAGTCGTAGGCTTTCCATGCCTTCTTGTTAT 83615 37 100.0 34 ..................................... AATCCATTGGTTCAAGAGGTTTGAGCTGGCTCCG 83544 37 100.0 34 ..................................... TACACTACACCAGACACTCCAGCAGATCCTTGGG 83473 37 100.0 36 ..................................... TCTACTACAGCGTCAGACATATCAACAGGCTGAATA 83400 37 97.3 36 ...........T......................... TAGTCCACTTTCTGCGATCGCTGCGGAAACTTCCTT 83327 37 97.3 33 ...............A..................... AAATTAGTAGAATCTAAATTCAATCCGTCACCA 83257 37 94.6 36 .......G..T.......................... GCTTCACCAACGGCTAATACTTTGCTTGCTAGGGTA 83184 37 100.0 0 ..................................... | TGGGGA [83152] ========== ====== ====== ====== ===================================== ======================================= ================== 13 37 99.0 36 GTTTCAACGACCATCCCAACTAGGGGTGGTTTGAAAG # Left flank : TGCCGTTTTTGACGACATGAGTTGACTGACAAACCGGGCAAGTTGGTTGGGAATCAGACATAGTGCTTCTGATGGAACGGTATCTCTCCTATCCTTACATCTTTAGGACTACCAAGGATTTAAACGATCGCTACGAAAAGCAG # Right flank : AGCTAAACAAAAAACAGAGTGGATTGAAAGGAACGTCAGCTTCCCAATCTGGCATTTTTTATTCAGATATTTTTATGCAGCAAGACGACACTAATTTGTCACTGCTACTTTAGCGACATTAATTTGTCACAACGACAACAATCTGTCACCGACGACAACAATCTGTCACCGACGACAAATAATTAGTCACTGTACACTAGAAAAGCGGGTAATCGGACTCGAACCGACGACATTCACCTTGGGAAGGTGACGTTCTACCACTGAACTATACCCGCATTTTGAGGTTAACGATCAGCAGTCTACTGATGGTTAACTTTTATTATACGACCGATCGAGCGCCAGCATCCAGTAATTGGAAAACTGGCGCGATACATCTTAACGTTGAGTCGCGATTATGGAGCCTTGACTAGATAAGGTGAAGAAATCGCCTCAGCACGACCGGCATTCACCAGCGCCTGGTAGACAAAAGCGGCGACTTCAGCACGGGTGGCATCACGACT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACGACCATCCCAACTAGGGGTGGTTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-14.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //