Array 1 30534-32662 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORZP01000201.1 Xanthomonas fragariae strain PD 4932 isolate PD 4932, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30534 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 30594 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 30655 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 30715 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 30775 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 30835 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 30895 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 30955 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 31015 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 31075 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 31135 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 31195 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 31255 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 31315 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 31375 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 31435 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 31495 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 31555 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 31615 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 31675 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 31735 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 31795 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 31855 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 31915 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 31975 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 32035 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 32095 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 32155 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 32215 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 32275 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 32335 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 32395 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 32455 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 32515 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 32575 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 32635 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //