Array 1 60464-64324 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCJT010000006.1 Eggerthella lenta strain DFI.7.11 HAFMCHCI_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================================== ================== 60464 33 100.0 34 ................................. GTGAACGTCGGCGCACCTGCGGCGTTGTACTGTC 60531 33 100.0 33 ................................. ACAAGCGAGAACTGCGGAAAGTTGCTGAACTGA 60597 33 100.0 34 ................................. CTGAACGACTACGGGCTGCAAGACCTCGTGGGGC 60664 33 100.0 33 ................................. CCCTTTATTACAGGTACATAAACACCGACCGCG 60730 33 100.0 33 ................................. TACTCCGAAACGGAGTACATCCATGACACGGAG 60796 33 100.0 33 ................................. CGACACCTGCGCCTGAGTGTTTCCGATGGTAAG 60862 33 100.0 33 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAGC 60928 33 100.0 33 ................................. CAGATGTCGCCGTTCATGGGCGCTTCAAGATCG 60994 33 100.0 33 ................................. CTCATAGTATGCGGGGCGCTGATGCGCGCCCCG 61060 33 100.0 33 ................................. CTCATTGGTGATCTCAATTCCAACCGGCACGAA 61126 33 100.0 34 ................................. TCCAGTATACAGAGCGTTGCGCAAGTTGTCCTGG 61193 33 100.0 33 ................................. CCGTGCTGCGCCCGCCCAATTCCATGAAAAGGC 61259 33 100.0 34 ................................. CAAAACCGAGAGGATGCTCATATCCGACGGCCGC 61326 33 100.0 33 ................................. AGGCCCTTAAAGCCCGCAATTACGACCTGTTGA 61392 33 100.0 34 ................................. ACCTTGTAAAAGCCGTCGATGCGCGCGTACTCGG 61459 33 100.0 33 ................................. CACATAGTCACGCCATAATCATCGCGCGAGAGC 61525 33 100.0 33 ................................. TACTTAGTGTGTTATATGCGCCGCAAATACTAT 61591 33 100.0 34 ................................. GGATACGCTCTCATGCATGCATACCCTGTGGCCG 61658 33 100.0 35 ................................. TTGTTGTCGCCGTTCCTCGCGGCAGCCACCTCGGC 61726 33 100.0 33 ................................. CGATGCCGACCACGACGATAGCGCCCATGATGG 61792 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 61857 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 61924 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 61994 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 62060 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 62126 33 100.0 32 ................................. GAGTTCGTTACCGACACGATCGGCCTCATCGG 62191 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 62258 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 62325 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 62393 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 62460 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 62527 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 62594 33 100.0 36 ................................. ACGTATACGGGCTTCGCGCCGGTGCCGTTGACGTCC 62663 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 62729 33 100.0 33 ................................. GATCCGCTACGACAACGTAGGGGATCAGGCCGA 62795 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 62864 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 62931 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 62997 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 63065 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 63132 33 100.0 52 ................................. AGGCCCTGTCGGCCCGGTCGGCCCTGTCGGCCCGGTCGGCCCTGTCGGCCCC 63217 33 100.0 34 ................................. ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 63284 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 63350 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 63415 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 63482 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 63548 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 63614 33 100.0 33 ................................. TGGCAGCCTCTCGCAGGGTCTCGGCTGGCTCAA 63680 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 63750 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 63819 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 63885 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 63951 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 64022 33 97.0 33 ..T.............................. CTACGATGCCATGGCGTCCTATGCATTCACGGG 64088 33 97.0 34 ......T.......................... GAGGAATATACGCGATTCGTTGAAACGGATGTAG 64155 33 90.9 36 A.....T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 64224 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 64290 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [64294,64306] ========== ====== ====== ====== ================================= ==================================================== ================== 58 33 99.2 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : GCGCGGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCAGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTATTGGCGCTATATGTTGATCGAGGCAGTAAATTTTGCGCATAATATTGCG # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCACTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //