Array 1 6-215 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGLS010000004.1 Anaerococcus nagyae strain DSM 101193 Ga0454152_04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 32 ............................. ATCTTTGCCTTGACCTTCCAAGATAATTTTAA 67 29 100.0 32 ............................. TGAGCTACACTCATCATTATTATATATGAAAG 128 29 100.0 32 ............................. GTAAGAATTAGCTGTTATCGAGAAGTCGGTGT 189 27 86.2 0 .................-...A.-..T.. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.5 32 GTTTATCCCGCATACGCGGGGGTGATCCT # Left flank : GTTGCG # Right flank : TTCATTTTTTAATAAATGTTTAATAAATGTAAAAATTAGAGAATATTCTCCTAAAATTTCTATACATAAATAAAGGATAATATTATTATAGCTAAAATAATTCAAAAAATAGAAAATTTTACCATTGTTGATAATGAATATTTAAATGATAAGAATTTGAGTTTCAAATCTAAAGGAATAATGACTTATTTTTTATTTTTGTCTGGTGATTTAGTAATTTATTTTGCTGAGGTTATAACTCATTCAACAGATGGAATAAAATTATTTAGGTCAGGTGTTGATGAACTTATAAAAGAAGGCTATACAAGGCACTATCCTGTTCGTGAAAATGGTGTGATTGTTCGTTAGGAGACAGAAATATTTGAAAAGAAAAGACCAGATGAGCAAAAGGTAAATATAGTTAAAGATTATGAAGAAGAAGAAAGACTATTAAATATCCATAAAACAAGTACTTATGCTAGTAAGTGCTCAAGCAGTTATAATAGTTTTGACAAGATCAC # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATCCCGCATACGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTACCCCGCATGCGCGGGGATGATCCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 165018-165964 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGLS010000003.1 Anaerococcus nagyae strain DSM 101193 Ga0454152_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 165018 29 100.0 32 ............................. GGGTGAACTTGCTAAGATGATAAGTCAGGAAG 165079 29 100.0 32 ............................. CATTGACCCAATTTGACCAAATAGACCAGTAA 165140 29 100.0 32 ............................. AAATATAAATGATGATAATCCAGTAAAAAAAC 165201 29 100.0 32 ............................. AATGATAAGGTAGAGGTACTTAAAAATGGGGA 165262 29 100.0 32 ............................. AGGATCAATAGTTATGAGTAGCGGAAAGGTAA 165323 29 100.0 32 ............................. TCGTTTGCTGCAGATTGACTAACTTTGGTACT 165384 29 100.0 32 ............................. GTTAGCCACTAATCTTAAAGAGGAGAAAGCAA 165445 29 100.0 32 ............................. TAACCTATCTAAGAAAAAGTGCTAAATATAGC 165506 29 100.0 32 ............................. CTCATATCCTGGAAGACTGGGAGGATATGATT 165567 29 96.6 33 ............................G TTACTTATATGATAATACCTTTATTGTAACTTG 165629 29 100.0 33 ............................. GTTTTTTGCCTCATTGATTATTTTATTTTGCAT 165691 29 100.0 32 ............................. TGTCTAATCTTTATAGTTATATACAAAGGCTC 165752 29 96.6 33 ............................G TTACTTATATGATAATACCTTTATTGTAACTTG 165814 29 100.0 32 ............................. TTAAGGAGGATTTTTTTATGTCAATAAATAAA 165875 29 100.0 32 ............................. CTTACAGATATCATTCAAAGCAAAATATGGTT 165936 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================= ================== 16 29 99.4 32 GTTTATCCCGCATACGCGGGGGTGATCCT # Left flank : TTTTAATAAAAATAGTATAATAGAAATTGGATGTGTAAAACTCTATAATGGAAATTTAGAAGAATTTGCTACATCCATAAAAATAGATCATAGTTTACCTAAAGAAATAGTAAACCTTACCGGAATAACTGATGAGTTTTTAGAAAAAAATGGAGAAGATGAAAAAGAAGCTCTAAGAGCACTACTAGATTTTATCAAGGGGTTAACCATAGTAAATTACGGAAATAACTTTGATATAAATTTTTTAAATAAGTCTCTAAATAAACATAATTTAGGACATATAAAAAATCAGACCATAGACTTAATGAGATATGTAAAAAAAGAAAATAGAACATTAGAAAATTATAAATTAGAAACTGCTCTAAAAGCATACGGAATAGACAAAAAAGTTCCACATAGAGCTCTAAGTGATGCAAAACTTACCTATGAACTATCTACTAAAGTAAATATTTTTAAAGAAAAAATAAAATAGATTGGCTAAAAATAAGGATCAAATTACT # Right flank : CTGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATCCCGCATACGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTACCCCGCATGCGCGGGGATGATCCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //