Array 1 27887-30618 **** Predicted by CRISPRDetect 2.4 *** >NZ_PHJX02000011.1 Acinetobacter baumannii strain ZQ5 Contig_12__reversed_, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 27887 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 27947 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 28007 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 28067 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 28127 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 28187 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 28247 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 28307 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 28367 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 28427 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 28487 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 28547 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 28607 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 28667 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 28727 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 28787 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 28847 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 28907 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 28967 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 29027 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 29087 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 29147 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 29207 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 29267 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 29327 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 29387 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 29447 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 29507 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 29567 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 29628 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 29688 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 29748 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 29808 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 29868 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 29928 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 29988 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 30048 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 30109 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 30169 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 30229 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 30289 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 30349 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 30409 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 30469 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 30529 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 30589 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 46 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //