Array 1 1063436-1062145 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070982.1 Pseudomonas entomophila strain Small chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1063435 28 100.0 32 ............................ CCCTCGAACAAGGTGGCGCCGGCCAACAACCT 1063375 28 100.0 32 ............................ CACGATCCATTGAAGTTTGGCGGGCGATTCGC 1063315 28 100.0 32 ............................ AACGGCCTGGCCCAGCAGGTCGCGACCAACAC 1063255 28 100.0 32 ............................ ACCTCGACGCCGAGCCGGCGGCGCGGGTTCTT 1063195 28 100.0 32 ............................ ATCTGGCCAGCCTCGTATGCCACCTCCTTGTC 1063135 28 100.0 32 ............................ CGCCAGCGGCGGAACGGCGTTGCCTGCCATGT 1063075 28 100.0 32 ............................ AACCCATCATAAGGCGATGTACTAGTGGCGCT 1063015 28 100.0 32 ............................ ACTGCAAGATGCTGTCGATCTCAGTGAGGTCA 1062955 28 100.0 32 ............................ CGCAAGGCTGACAACGGCCGTTGCGCTAACCA 1062895 28 100.0 32 ............................ TTTGGCGGCGCGGGCGATGGCAGTACCACCTT 1062835 28 100.0 32 ............................ GAGAGGTTCTCCTCGATCCGCAGCAGGTTGAT 1062775 28 100.0 32 ............................ CACCGCCCGTCAGGGCCTTGGAATGCGTCACC 1062715 28 100.0 32 ............................ ACGCAGGTCTGGCACGTTGAAGGTGGTACTGC 1062655 28 100.0 33 ............................ AGTTCGTGCAGCGCGCAACCCGGGCGCTGACAA 1062594 28 100.0 32 ............................ TCGCGGATCGTGGAGGCTGGCGCGTCGGTGAA 1062534 28 100.0 32 ............................ GCGCAGGTCTGCGCGCTCGCCGCCTTCTTCAT 1062474 28 100.0 32 ............................ TTCGGCGGATGAACCGGGCACGGCCAGCGCAG 1062414 28 100.0 33 ............................ CGAATGCCTCGACCTCGCCAGTGGCGTCCTCGG 1062353 28 100.0 33 ............................ TTCGCGCTCGGCGACGATCGTGTCTGGCTCAAA 1062292 28 100.0 32 ............................ GTAACGCTGAGCAAGCCAAGCGAGTTCAACGG 1062232 28 92.9 32 .C..........A............... ATCAAGCAAATCTGGTACGCCCGGTAAGGGGA 1062172 28 92.9 0 ......................T....T | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.4 32 GTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : CGCTCTGGAACAACTGCAAGCGCTCAACTGGCTCAGCGGAATGCGTGACCATACCCAGGCATCAGGCGTTGAGCAGGTGCCAGCTGACGCTCGGCATCGATGCGTTTCGCGGGTGCAAGTCGACAGCAACCCGGAGCGCCTGCGTCGGCGGCTGGTCAAGCGGCACGGGATCAGTGAAGAGGAAGCCTTGCAGCGCATACCGGACAGCAAGCGCAAGCTGAGTGACCTTCCGTTTGCACAATTGCGCAGTCACACAACTGGACAACTGTTCAAGCTGTTTGTGCGCCACGGCCCACTTGTCGATGAAGCACAGGGAGGGGGCTTTGGGAGTTATGGTTTGAGTAGCAACGCGACCGTGCCGTGGTTCTGACCCTTTTTTCTTGAGAAGGTGGCCACCCACGTAAAATCAATGACTTACAGGGGTGGTCGCAAAAAGGGTATTGAGGCATGAACTGAGTTATTCCTTAATCCATTCAGTCAGTTAGGTTATTCGGGTTCTA # Right flank : AGGGCGTAGTTCCAAATCTGGTACAGAGCATGATCGGGCTGGTTCGTGAACAGTTCGCAGCGAGGGACGTGTAGGTATTGTGTTTAAACCACAACACCGTTGGGCTGCTGCTTCATCCACAACTGGGTTTCGTACCATTCAGATTTGAGGAACAGCGAACATCGGGTGACTGGCGGGTGGCGCTGGCGGAGGTGAAGCAGGTGATTGTCTGGGGCTCATTGTGATCACCTGAGTTTGTGTTGCCCGGATCAGGGCTGCTTTGCAGCCCATCGCGGGTAAACCCGCTCCTACAAGGATGGCGGTGTCTCAGCCATATCGTTTAATAAAATGTGGAAGCGGGTTTACCCGCGAAACCGACGCAGGCGGTGCCATCCACAAGTTGCTGTCGTCAGGCACGCACGAAGCGTTGCCGCAACACATCACTCAGTGCATCCACCAAAAGCACCAACACCAGCATGGCCATGATCACCGTGCTGGCCTGGGCCTCCTGGAACAGGCTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1073822-1075354 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070982.1 Pseudomonas entomophila strain Small chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1073822 28 100.0 32 ............................ CATGGCGATGATGTCGGCAACCCGGGCGCGTT 1073882 28 100.0 32 ............................ ATGATGGTGCATCAGGCCGACAGGGCGACCCC 1073942 28 100.0 32 ............................ ACCGGCCGAATGTCGTCGTCATTGAGGTGGGC 1074002 28 100.0 32 ............................ TGATGGATTCGGACGACTGCATCAAAGTCATT 1074062 28 100.0 32 ............................ TGGTAGTAGACGTAGCAGTTGACGCCTTGGTC 1074122 28 100.0 32 ............................ TCCTGCGGCCAAGGCCTCAGCCTTCAGAGATG 1074182 28 100.0 33 ............................ TTGATCTTGATCTGCTTTTTCTCTGGAGACTCA 1074243 28 100.0 33 ............................ CTCTGGAGTCGTAACCCTGCCGGCCTGGATGAA 1074304 28 100.0 32 ............................ AAACGCGCACGCGCGCGACTCAGGCAGTTCCG 1074364 28 100.0 32 ............................ TTGAGTACCGCGGTGAAGCTTGCCTTCGTGAC 1074424 28 100.0 32 ............................ AGCATCGGCTTGCCATCACTACCGGCAATGAT 1074484 28 100.0 32 ............................ ACAGCCGTAAAGGCCCGGCAATGGATGGGCCA 1074544 28 100.0 32 ............................ TGTCCACGAACAGCAGCACGGCCCAGGGGCAC 1074604 28 100.0 32 ............................ TTCGAGGCCCAGTTGTGTTGGTACTACTCCGA 1074664 28 100.0 32 ............................ TTTGTCGGAGAGGACGCCGGGGACGTTTTCCC 1074724 28 100.0 32 ............................ TTTCAGGCAGCCGCAGCGGTATGGATGGGCGG 1074784 28 100.0 32 ............................ ATGAACAGTTCCTGGTTCCCGATCCGAAGCGC 1074844 28 100.0 32 ............................ GCGTGGCTCACGGAGACGCGACCCGCCAGCGC 1074904 28 100.0 32 ............................ GGGTGGTCTGGACGCGTTGCGCGTAAAGAAAG 1074964 28 100.0 33 ............................ TTCAAAGGCCTCGGCTTCCAGTGGCGTAATGCT 1075025 28 100.0 33 ............................ ATGGGGGTTGAAGAGGTTAGGCGTTTGATGGCT 1075086 28 100.0 32 ............................ TGGGTGCGGCCCGACCCTTGGATCAGCAGCGG 1075146 28 100.0 32 ............................ TTGGCACCGGCGCCGACTGGGGCGGCCAGCAC 1075206 28 100.0 32 ............................ TGGCAGCGGTACCGGTCCGTTCGATGAGCTGA 1075266 28 100.0 33 ............................ AACCAGGGAAGCGAAAGCCCCAGGATGATTGGT 1075327 28 92.9 0 A...........A............... | ========== ====== ====== ====== ============================ ================================= ================== 26 28 99.7 32 GTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : TGCCTTCCATGGTGGCCGTATGCTCGTGAGTGGATTGGGCTGGTCGTTATAGCTGAGTTGGAGAGCCGGGTGCTTGTGGATTCTGTTGCGAGAGACTTCTGCCTTGCCACGTTAGCTGGGTAGCACGTAGGAGATCACACATACCGCTGTGGGAGCGGGTTTACCCGCTAAAAAGGCGACGCGGAGTTCACGGCGGTTCGACGCTTCGATAAACCCGCCCACATGCACCTCGCCAGCCTCGGTAACAGCACTGTACCTGTAGGAGCCGGCTTGCCGGCGAATGGGCCAGTGCGGCCGGCACAAGGCAGTTGCTCCCACAGGGACCTGTTGAATGAATGGATTACGTGCTGTTCCATGAGAGGAAGACTGACCCTCTTTTTAAGGGCGTGAGGTTGGGCTTTATAAATCAATTAGTTACGGAAGCTGGCGGAAAAAGGGTGTTTGGGCTTCTCAAGTGATTTTGGTTTTATACCTCAATGAGTTAAGGTTTTTGGGCTCTA # Right flank : AACCCAGGCCATGAACGGCAGCGCGAGCTTGGACATTCACCGCTGTGCAGGCGGCTGAAACATCAAGGCGTTTGCAGGCAAGGCTAACGCCTCGCATTCGCCAGCAAGGCTGGCTCCTACAGGTGGAGGGCGAGGCTGAAAGCCAGGCACAAAAAAACCGACCATAAGGTCGGTTTTTTCTGGATCTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCTTGTGGCGCCGCAGTATAGAGAGGTCGCACAAGCCGGTCAATCGGCTTTCATGGTCAATTTTCACGCATTGGGCTAAACTTCCCGGCCCTGTCGAACCGAACATCATCATGCGCGTCGCCGATTTCTCTTTCGAACTCCCTGACTCACTCATCGCCCGCCACCCACTGGCCGAGCGCCACGGCAGCCGCCTGCTCGTGCTCGATGGCCCCAGCGGCGAGCTGGCCCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //