Array 1 24198-23238 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QYCK01000003.1 Streptococcus mutans strain UAB-4 NODE_3_length_337410_cov_251.92, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     24197	    36	 100.0	    30	....................................	TAAAGCTGTATATGCATCTCTTTTGTTATA 	
     24131	    36	 100.0	    31	....................................	CTCAAATGATATTGCTTTACCTTTTGAGTCG	
     24064	    36	 100.0	    30	....................................	ATTTTCTGTTAACTCAAACTCATGCAGAAT 	
     23998	    36	 100.0	    30	....................................	TACTAAGACCGCTAACTTAACGAACTTAGA 	
     23932	    36	 100.0	    30	....................................	TACTAAGACCGCTAACTTAACGAACTTAGA 	
     23866	    36	 100.0	    30	....................................	TCACTAAAATGCAGGAGAGAGGAAAAGAGA 	
     23800	    36	 100.0	    30	....................................	TCTGGCAAATCGAGGGCGCGATTGCGCCAT 	
     23734	    36	 100.0	    30	....................................	GCAATCATGCGCCAAAATATTATCAGGTCG 	
     23668	    36	 100.0	    30	....................................	TTTGCTTTTGTTTTTGCTTTGTGCGTTTCA 	
     23602	    36	 100.0	    30	....................................	AAAGTATCTGGAACTCAAGAAGTAAATGCT 	
     23536	    36	 100.0	    29	....................................	ACCGGAAACGTTGTCTTGGTTGGTGATGT  	
     23471	    36	 100.0	    30	....................................	AGCTAAGTTATCGTTTAGATACGCCGTTTC 	
     23405	    36	 100.0	    30	....................................	ATCTGAGATTTAACAAAATCATCTTATCAA 	
     23339	    36	 100.0	    30	....................................	ACTAGCAACACAGCACCTTTCAGCGCAAGT 	
     23273	    35	  75.0	     0	..........CA.......A.TG..T-.A.T.....	|                              	A [23258]
==========	======	======	======	====================================	===============================	==================
        15	    36	  98.3	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGCGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAAGCGCTAGAAAGATTGATTTCTAGCGCTTTTTTAGGTATAATATAATTAATTAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATAAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG
# Right flank :  GCATTATGCGAAAGAGTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTGTTGACGTCCTAAGGTTTGATACAGATCTTTAGCTTTTATCACATTGTCCCAATGAATAATG

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [10-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//