Array 1 166506-163170 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMVP01000012.1 Enemella evansiae strain NML 020265 NML020265_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 166505 29 100.0 32 ............................. TGCTCGGTGGCGATCGACCGCGCCGGGGTGAT 166444 29 96.6 32 ............................C CCGAAGCGGACCGCGGCCCGGGTCGAAACATC 166383 29 96.6 33 ............................C TCGTTGAGGAACTGGTCATCGCGCCAGAGGTGG 166321 29 100.0 32 ............................. GTCATTCAGGGACACACGACCCAAGCGGACTG 166260 29 96.6 32 ............................C GGGGCGACGACGCCGACGACGCCGAGGATGGC 166199 29 100.0 32 ............................. CTGCCCCAGGTCACCATCGGTTTTCGCGGGTT 166138 29 100.0 33 ............................. CGCTGCGACCGCGCCGCCCGCCTGCTGGGTGCC 166076 29 100.0 32 ............................. GCGTTGGCTGACGAACTGGAGGCATCGTGAAC 166015 29 100.0 32 ............................. GCTGAGGCCGAAGCGCGACGCCAACTCGCGAT 165954 29 96.6 32 ............................C GGTGTCGTAGGCCATGCCGTAGACGAACGAGA 165893 29 100.0 33 ............................. GCATCTCCGACCACGCAGGCTTTGCGCCGGGCG 165831 29 100.0 32 ............................. TTCGCGACGGCGCGGTCCACCATCGTCTGGAT 165770 29 96.6 32 ............................A GCCATCTTCGTCGGTCTCGGGCCGAATGACGC 165709 29 96.6 31 ............................C CAGGTTGTCCAGCGCTCGCTGGACGGGTTCA 165649 29 96.6 32 ............................C CCCAGCCACCGTAAGCGCTGCCGCGGGTGGAC 165588 29 96.6 32 ............................T ACCGGGTGCTTGCCTTCCCCGAGGGTGTCGTC 165527 29 100.0 32 ............................. TCAGCGACGGCAGCAAGGGCCTGCTCTGTGAC 165466 29 96.6 32 ............................C TGAGCCGGGACTTTTTGGCGTACGCGCAGAGC 165405 29 100.0 32 ............................. GAGGACGGAATGAGTGACATGACCCTGAGTCG 165344 29 96.6 32 ............................C CAGTCGTCCCCGGAGCCGGAGCGGATCAGATA 165283 29 96.6 32 ............................T TTTACGAGCAGCGCATCGGATTGCTGCAGGCG 165222 29 100.0 32 ............................. CTCGCTGTTCTGCCAGCTCGTGCGAGCAAGCA 165161 29 100.0 32 ............................. TAGTCGGGCGAGTGCGGTGGCACCCAAGCGAT 165100 29 100.0 32 ............................. GCGAGTTCGGCCACCCGGATTCATGAGCTGAA 165039 29 96.6 32 ............................C CAGTGACCGGAACGCCTGAAATTGCAAGGGCG 164978 29 100.0 33 ............................. CTCCACGGCTGGAACGGCAACGAGGTGTTCGGC 164916 29 96.6 32 ............................C GCATAGCTGAGCGCAGCGGTCACGCGGTAGCG 164855 29 96.6 32 ............................C GCTGGGTTAACCCTTGGGTACTTGCTTGGGTA 164794 29 100.0 32 ............................. ACCTCACCTGATCACCCATCACCCAGGAGCAA 164733 29 100.0 33 ............................. GGGAGTACCTGCCGGGCGCACCAGACCGCCAAT 164671 29 100.0 32 ............................. CACCTCGACCAGGCGGGCCGGCGCTGCACCAT 164610 29 100.0 32 ............................. CTCGGCGAGAACTGCGCGGAGACCCTGGCTAA 164549 29 100.0 32 ............................. AACTCGAGTCGGTCGCCGAGCAGGGGCACGAG 164488 29 100.0 32 ............................. AAGATCGGCAACCCCGTCGACCCGCCGCTCGG 164427 29 96.6 33 ............................C ACCCCGGTCCACGATCCCGGCCCCCGCTGGACC 164365 29 100.0 32 ............................. ACTCGGGAGAGGGCCGGTCCGAGCCGCTCAGC 164304 29 96.6 32 ............................T GCTGGACGCCGGCGACGATCTCCTCGCAGCAG 164243 29 100.0 32 ............................. GATGCGGGGGTGGCATAGCAGAACCCGCACCT 164182 29 96.6 32 ............................C GCGGTCTCGTGCACCCTGTCGCACAACAATTT 164121 29 100.0 32 ............................. CTGCTCCCCGAGGTCGTCTCGATGCTCGCCGA 164060 29 96.6 32 ............................T GCTGCGCTGGGATAGCGGGTCACGCGCGCGAC 163999 29 96.6 32 ............................T CGGCATGGTGGGTGGTGCTGGACCGATACGGC 163938 29 100.0 32 ............................. GTGGTTGGCCCCTCGCTGGCCGTCCACTGCGG 163877 29 96.6 32 ............................C CGACGTTGCCGATCAACTGACCAGCTCGGACC 163816 29 93.1 32 ..................A.........C CCTTCGCCTAGGACAACACCACCTACGGGGCA 163755 29 100.0 32 ............................. GAGTACCCCGAGGTCGGCTACGAGGACGAGGG 163694 29 100.0 31 ............................. AGGGGCCTCGGCAGCGAGAGCGTCGTGCCGA 163634 29 96.6 32 ............................C AGTGACCACTACGAGCGCGACGAGTGGATCGA 163573 29 96.6 32 ............................T AATGGGGAGTGCCTTCTTGCTCTTCATGGCCG 163512 29 100.0 32 ............................. GACCGTCTGTTCGCCCGCCTGACCCCGCCCAC 163451 29 100.0 32 ............................. ATCAACGCGCCAACGCCGCGCTGACGCAGAAG 163390 29 100.0 32 ............................. CACTGATCGGTCCGTACCGGCGGGTGGTGATC 163329 29 100.0 32 ............................. TCCGCCAGGATCATCGGGATCACTCCGCAGTG 163268 29 93.1 41 ........T...................C AGGGCGGCGGTACGCCACGCCGAGCCCTGCCCGTGCTCCCC 163198 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ========================================= ================== 55 29 98.3 32 GTGCTCCCCGCGCGAGCGGGGATGATCCG # Left flank : CTTGTTGCCGCAGGAGCAATCGGAGTTCGAAGTGGATGTGACCTATCTCTGGGATGACAAAGCGGTGAATGTGGCCGGCGGGGTGGACTATTCGGAGGTGGAGTTCTGATTGTCATCGTGCTGAGCAAGGTCCCTTCGGGCCTGAGAGGCCATCTCACTCGTTGGCTCATGGAGGTGGCGCCAGGTGTCTACGTCGGAAAGGTGTCAACGAGGGTTCGAGAGGAGCTCTGGGCGTTGATCCTGGACATGGTCCGTGACGGCACTGCGCTGATGGTTCTGACAGCGCGCAATGAACAAGGTCTGGAGATTCGCAACCATCGGCACGCATGGACGCCTGAGGACTTCGACGGGGCCATTTTGATGCGTCGGCCTCCGGCGAACGTGGAGTCGACCGGGGCCAAGCCGCTCTCGTCTCGAGCTGCTCGGTTTCGCCGGCTTCGGAGCCGGGGAAAGTGAATTGGATCTGTCTCCCAGTAGGGTGAAACCCCTTGTCAGGAAGT # Right flank : TGTAGAGATCTGCAACGAGTGTGGGCTCTGTGTACCCCGACGCTCGAAACCGCCGGGTTCATCTCGACACGCTGGTCCGGCTCCGCTTCGCTGCGCCGGGCCAGCTACTCGATGAGCGTGTGGGGACTGGTTTCGCTTCACCGCACCGGGTCAGCTGCTCGATGAGCGTGGGTGGGAATCGGCCCCACGGGGCCACTACTCGAGAAACGTTCACGCACCCACGGGTTCAGCCGGGGGAGCGCTGTCGGAATAGAAGCGGGAGAGCAGGGCGTACGCCTTGGTGCGGAAGGCGATCAGGACGACGACGAGCATCACCAGCGAGGCCATCACGAAGACCGCTGCGATGCCACGGGCCTCACCCGATCCGAGCAGCCAGCCCCAGGTCGCCCTGCCGGAATCGCTGTTCATGTAGGGAATCAGCCAGAACTGGGCCAGCGGGCCGATCAGGAATGACGACACCGGGGTCGATGCCGACTCCACGCTCTGCGCCAGGCCGAAGA # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 176228-175509 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMVP01000012.1 Enemella evansiae strain NML 020265 NML020265_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================================== ================== 176227 29 96.6 32 ............................A GCGTCCGACTGGGTTGTCGGTCAGGTCTGGGG 176166 29 96.6 32 ............................T CCCACATCGACGAACGCGAGCCACGGAACCAC 176105 29 96.6 32 ............................T GAGTGTCTGCCAGTCGGGGAGCTGCTCGATGT 176044 29 96.6 33 ............................C TATCAGGTCTCGATCGGTGACCCGGCCGCGCCG 175982 29 100.0 33 ............................. CGGATCTACCGCGAAGCACCGAGGTCCCCGGAG 175920 29 100.0 32 ............................. CGGACCGCCAAGGACATCGACCAGTTGATCCG 175859 29 100.0 32 ............................. TTGATCGAGGACAAGGCCAACGGCCCGGCGAT 175798 29 96.6 32 ............................A TACGAGCAATACGCATCAGCACAGCACGAGGG 175737 29 96.6 32 ............................A TGCTGCCCTCGTATCCGGCTGAGTTGATGGCC 175676 29 93.1 110 ..............G.............C TCAGGATCAGGCGAGTAGGGTCTCCTGCGCTGCCCAGGTGCACAGCATTGGGTGGTGGAGCGGGATGACCCGGCTTTGGTTGAGAGCTTGGCCACCGCACGGGTGTCAGA 175537 29 93.1 0 ............T...............C | ========== ====== ====== ====== ============================= ============================================================================================================== ================== 11 29 96.9 40 GTGCTCCCCGCGAGAGCGGGGATGATCCG # Left flank : TCGTTGAGCGCCTCGCCCCACCATTGGGGTGTACCGGTGAGCAGGTCGGTCTCCGGCTCCTCGAAGTATTCGGCGGATCCCTCCCAGTAGGTCTCGCTGTACTCATGATCCCTGCCGAAGAGGATCGCTCGCCCACCCGGCAGGAGCGCCATCCGGGCCCAGTTGCCGCCGCCGTCGTGACAGTGCCGGATCCGCCCGCGGCCGTACGTGTCGTCATATCCCTGAGCCGCGTACAGCGCAGCCAATGACGCCCAGCGGTGATTGAGGTTCGCGGGATTGTCGAGGTCGACCGGGACCAGGCTCATGGCCGAAGACTAGATTGGGCGAGCTGGGCGAGCTGATCGGTGACGGCCTGGCCAGCCTGCCGTCTTTCGGGTGCGCGAGCCGGATGGGGTCGGTATGCCACTGTGTCGTCCAAACCGACCGGGTGTGGCGGTGCAGGGATTCGAGAAGTGAATTCAGGTTCGTCGTGGAGATGGTGTAATCCCTTGTCAGGAAGT # Right flank : GCTTCTTCTCGAAACTCTAAGGCTTTAGTAGAAAGTTTTGCCAGGCCATTGACGTCGATGCTGGCACTGGGCGATGCTGTAGGTCACCCCCACCCCCGGGAGACATCTCATGGACGAGACCTTCGCAGGCGTTGATGACAGTCTGAGCCCACAAGCCCGCTGCGTGTGGGCGAAATCAGGAAATCGTGCCCGTGAGTGGCTGCCGCTGAATCAGCACATGCTCGACTCGGCTGCGATGGCCGAGCGACTGTGGGATCAGTGGCTGGCGCCCGGCATTCGGGTTCGTTGGGGTGAGGCGTTTCCGGGCGGAGAGATCGACGCTCGGGCGCTGTTCGTGTTCCTCGCCGCCGCCCATGATGTTGGCAAGGCCTCCCCCGTCTTCGTCGCGCAGGTGGAGACCTTCGCTGAACGGGCACGTCAGCAAGGGTTGCCCTGCGCGGTGATGGATCTCCTGAAGAACGATCGAAAGCACCTGCCCCATGCCACGGTCAGTTACCTCG # Questionable array : NO Score: 4.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.68, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGAGAGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //