Array 1 1597-548 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORZE01000021.1 Xanthomonas fragariae strain NCPPB 1822 isolate NCPPB 1822, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1596 28 100.0 32 ............................ TTCGCGGGCTAACGTCGGCATAGCAGCAATGA 1536 28 100.0 32 ............................ AAGGCGTCACGCCCGGAACGCTGATGCCGTTG 1476 28 100.0 32 ............................ ACGATGCTGCCGCTGGTGCCGAACACGTAGGC 1416 28 100.0 32 ............................ AGGAAGATCGCCAGGAGGACCAGGACGGTGAC 1356 28 100.0 32 ............................ GTCCTCATCTACACCACGCATCCCTACATCGT 1296 28 100.0 32 ............................ ATGAGCGGCACCGCTCAGATAGGCAATAACAC 1236 28 100.0 32 ............................ GTTGCCGGGTTGCCCGGTGTATAGCTCGATTG 1176 28 100.0 32 ............................ ATCACGGTCAGTACGGCACCGCCGATCGCTGC 1116 28 100.0 32 ............................ ACAAAGCGCGATGCACCGCGCTGGGAATCTCC 1056 28 100.0 32 ............................ AATCACGGTGTGGTAGGTGTCGATGTGGGAAA 996 28 100.0 33 ............................ ATGGTCATTGCGATCAACCTGTTTACGTTCTTC 935 28 100.0 32 ............................ GAAGACGGCAGTGTCATGCAGTTGCAGCAGAT 875 28 100.0 32 ............................ CTTGTATTGGGCTGTGTCTACTTGAATTGAAG 815 28 100.0 32 ............................ AGTACCAGGGCAACGTCCAGTGCGCATGCAAT 755 28 100.0 32 ............................ GCTAGCGCACTGACCATCACCAGGGAGACAGG 695 28 100.0 32 ............................ ACCACAATGTTAGAGGTATCGATCCACTGCAC 635 28 100.0 32 ............................ ATTGCGTCATGATCACAGCATCGCCGCCATTC 575 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGTCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACACCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGTCAGGTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //