Array 1 445438-446015 **** Predicted by CRISPRDetect 2.4 *** >NC_020064.1 Serratia sp. FGI94, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 445438 29 100.0 32 ............................. CCTGGCCGTCGTTGGCCAGCGTGATCAGCACC 445499 29 100.0 32 ............................. CCCGCGGCGCGAACGGCAGCGGCGCATTCCTG 445560 29 100.0 32 ............................. CCGATCCGGGTCAGCAAGCCCAGCACAGCAGA 445621 29 100.0 32 ............................. TTAAAATATACGCGGTGATAGTCACCTTTAAT 445682 29 100.0 32 ............................. GTTTTTCTGACGTCACCACGCGAGCAGAGGAA 445743 29 100.0 32 ............................. AGGTCTACGAGGGCGTCGTCCGGCTGACAAAA 445804 29 100.0 32 ............................. GAGCAGTCGCAAGTTGAGGACGTGACGCCTGA 445865 29 100.0 32 ............................. CAGACTCACTCGATTTGGAGGCATGAACAGTG 445926 29 100.0 32 ............................. AAAATTTGATATTAATAGCGCAATGATTGTGG 445987 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 100.0 32 GTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : GCGTGGAGATGATTTACCTGACGCTGGCGTTTATCACCACGCCGATTTTCTACCTTTCCGGCACCATCTGGCCGCTGCAGGCGATGCCGGGCTGGGTGCGCGCCATTTCATACTGCATCCCTTCCACCTGGGCCACCAAAGCGATCGCCGGGGTGAACCAGATGGGGATGTCGCTGAATGAAGTGGGGAACGACGTGCTGATGCTGCTGCTGCTTGGTGCGGTGTATACCGTGATCGGCATCGGGGTGGGGCTGGCGCATAACAGCGTAGCGCTGCGCAACCTGTTCCGGAAACGGCGGGTGTAGTGTTGCAGGATAAAGTCTGTTCGGTACGTGCGGCAGAAGGTGAGTGATTATCTGTTTGGTGCCGCGGCTATTCTGTGGCGAAGTGAAAATAAAGTTATTTTTTTTCAATCGGTTATATTTTTCAGATTATCGTAGAAAGTCGGTGGCTTTTTTAAGTGGTAAAAAATCAATATAATTCAATTGGATATATTTAGT # Right flank : GGCAGTTACCGCACCAGCTCTAGCCCGGCGACGCGTCGCCAGTAGCCGTTGCAGTCGCTATCGTTAGTCAGCGCCAGCGGCTGCCCGGCATTTTCATTGGCGCGGAACTGTTCGAGTATTGTCAGCGTTTCCACGCCCTGCGGCGACAGCCGCACGATATCGACCAACTCCTGCATGCCGTTTAGCTCATTCCCCAGGTTGTAGCAGTAGCCGCTCATGGTCTGGATGCCGTTGAGCACGAACACCTGCTGATTTTCCTGTGAGCGCATGGCGCGCCCCTGCGGGTATTTGATGCAGCAGGTTTCGCACTCATCCTTGCCGCGGTTTTCCGAGCGGGCGGTAAAGCAGCGGGCGGAGTAGGCCAGCGGCAGGTGACCGTAGCCCAGCACCTCTACCTCAAAACCGCGGCGGAAGCCCAGCTCGGCGCACTGCTCCAGCACTTTTCCCAGCCAGTCGCGGGACAGCTCCACCGGCATGCACCAGCGCGTCATGCCCTGCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 458396-459382 **** Predicted by CRISPRDetect 2.4 *** >NC_020064.1 Serratia sp. FGI94, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 458396 28 100.0 31 ............................ ATGCCGCCGACTCGCTGCTGGGCAGCAGCGT 458455 28 100.0 32 ............................ TTAGTCGTACCCTTAGTATCTTATCTATGTAC 458515 28 100.0 32 ............................ ATACCCGGCAGACGCGCATAGTTGTCGAACTC 458575 28 100.0 32 ............................ AAAACCGGAAGCCGTCTTTGCGGATCAGTGTG 458635 28 100.0 32 ............................ TGGTAGCGATATAGCGATTCTGTACCGTCGCG 458695 28 100.0 32 ............................ GGAATTGATAGACCACGTGCCACGAACGCCGG 458755 28 100.0 32 ............................ GCAATCGTCGCGCTGGTGCTCGGCCTGCTAAC 458815 28 100.0 32 ............................ TTTAATCCACTCGCTGCCGCCGATTTTTTTCA 458875 28 100.0 32 ............................ ACACCATTCGCGTCGCCGACAACCACGCGGTG 458935 28 100.0 32 ............................ TAACCCCTGACGAATGAGGGCCAATGCCGGCC 458995 28 100.0 32 ............................ TTCCCGTTTCAGCGTCCTGCTGATGTAGTAAT 459055 28 100.0 32 ............................ AATTTGGAGCGCTATTTCTCCGACAACTACCA 459115 28 100.0 32 ............................ ATAGGCCAGTGCGGGTTTAGTCCGCGCAGGAA 459175 28 100.0 32 ............................ TGTAGCTTGCTGAACCATTCGAGAATTAACAC 459235 28 100.0 32 ............................ AAAGTCCTGCCCGTTGATGACGTAGAAATGCC 459295 28 100.0 32 ............................ GGTCGTCTACATGGCTTAATGACAAGGTTCGC 459355 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 17 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGGCGTTGACCGAGCTGGAGCAGCACGGCTGGCGTAAGGGCTTGCGTGACTATACCGAAAGCAGCGCAATATTGCCGGTGCCGGCAGATGCGGCGTATCGTACGGTGCGTCGCGTGCAGGTGAAAAGCAGCGCCGAGCGGCTGCAGCGCCGTTCGGTGGCCAAAGGCTGGCTGACGATGGAGCAGGCGCAGGAACGTATTTCAGCGGTGAAAGAGCAACGCAGCACGTTGCCGTTTATCCGCCTGAAAAGCCTTTCCAACGGCCAGTCGTTTTTACTGTTTATCGAGCAGGGTACTCTGCGCACCACGCCGACCGCCGGTGAGTTCAGCGCCTACGGTCTGAGCGCGACAGCCACCATCCCCTGGTTCTGACCCTTTTTTTGCATGTAATCCTAACCTGTTGATTTTGCAGGTTAGGATTGAAGCGTCTGAAAAAAGGGTTTTTAGTGGAATAATGAGGGTTTGGCTGTTAAAACAGTTGATTAGCGGTAAACTGCAACA # Right flank : ACAGTTCATACCTATCGTGGTTTTCTGCATGTACTGACGTTCTCGCTCGATGATTCCAAGCTTATTATTACGCATACGGTAATACTCCCCCCTTCGCTCTATCCATATAATTGCCGTTTGCGCTCACTACCCCAACGATACCGGACCTAAAATCGGTCCACGGGGCGACTGTACGCATAAACGCCGGCAGTATCCCTTTCCGAGGTTGAGCGTAACGGAATCGCTCAGGATCCGGGAATAAAAGCGGGGTAAAGCCCTCGCTTTTCCAAGAGCCAATCTTCCCGTAGAAATCCCATCGCATCAGAGCTTCTTCTTTGCTAACTGGTTGCAGGAACGGGAACGGGTTTTGTATTGTTACCACGCGGTAGAAGCCCAGTAAATTCGACACCAGGTCTTCACCACTAAACCCACTGTCTGTCACCAAATTTATTGGGAATGACGCCTGCAGTCTCTCAAACTTTACCGCTAGTGACATCATCATCGCTAGGGCGATACTCTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 463176-464103 **** Predicted by CRISPRDetect 2.4 *** >NC_020064.1 Serratia sp. FGI94, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 463176 28 100.0 32 ............................ CGCCCACCATCAGCAGCACCAGCGCGCTTTTT 463236 28 100.0 32 ............................ ATTCCTCAGCGATTTCACGGAACGTGACCGAC 463296 28 100.0 32 ............................ TAGCAATACTACGAGTTACTAGGCAGGCTACC 463356 28 100.0 32 ............................ TCTATAGTGCTTCTCTAGTATCTATCTGTATT 463416 28 100.0 32 ............................ CAGCGCCGTAGCGCGGGCTTCTAACTGCTCAG 463476 28 100.0 32 ............................ AATGCCGTTGGCACTAATAGGCAGGTCATTTA 463536 28 100.0 32 ............................ GAGCTACGGGAACAGCCCGTTCAACGCAGAGC 463596 28 100.0 32 ............................ TCGTTAATCGGGGATGTGCCAGATGCACCGCG 463656 28 100.0 32 ............................ GCTGAGCGAGTGGCCGAAGGCATGGCGCCAGT 463716 28 100.0 32 ............................ TTCCACATTTCAACCTGTATAGAGGTCAGCTG 463776 28 100.0 32 ............................ ACCGGTGACCCGACCAGGGTATTAATCGACCT 463836 28 100.0 32 ............................ ATTCAGTCTCCCGTTCCCCACCCTGGCGGGGA 463896 28 100.0 32 ............................ CGGCATATTTGCATCGGTAATTCAGTGACAAC 463956 28 100.0 32 ............................ AACGTCAGGCCGGCGGCGCTGGCCGGATCATC 464016 28 100.0 32 ............................ TTCCAGATGAGCACCGGTGCCATCACCGAACA 464076 28 92.9 0 ......................C....G | ========== ====== ====== ====== ============================ ================================ ================== 16 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCGAGCTGACGTCCGCATGGCTGTCCGGACTGACGATCACGCTCGGCAACCCCAAAACCATCGCCTTTTACCTGGCTATTCTGCCGCTGGTCATCTCGTTGGATCATGTCTCCCTGCAGGTGTGGGGAACGATGCTGGTGCCGCTGACCATGTTTGTCCTCTTGCTTGTCGGCGCCATATTTATTCTGGCGGCACTAAAAATACGCCGTTTTCTTACCAGCGCATCTTCCCAGCGCATACTCTTTCGCACCACGGGCGTCATTATGGCGCTGGCAGCGTTTGGTATGGTGTTGAAATCTTTGTAGGGCGAGGGCAAATACCGCCGGCGTTTTATAGGGCTTTATGGTCTGAGCGCCATACCCAAGTTCTGACCCTTTTTTTATGAGTAACGTTAACTTATTGATTTTTAATAGTGTGTATCGGATGTCTAAAAAAAGGGTTTTGGACGAAATTATAGTGATTGTGCTGTTTAAACAAGCGATTAGCGATATACTGCAACA # Right flank : GTTACACCAAGGAACTTTGCTAACATATTGCGAGGGCAAACAGGCATTATTTTCTTCAAAGATTATTGGCAGCGTGGAGGTGAAAGCTTTCGTAACCGTTCGGGCGATCATATTGACTTGTGGAACGGTGATCGTTTGACGACTAAAACGAGTTATTTCCGTATTCAGTGGGGAATATCGTTAGCGGGACGTTTTAGTGATTTCTTTAAATCGAAAGAGATATGGTTTTGGAGAGCGGTATGAAAAGGGTTCTCGCTATTATCGTTGGGGCGGTAATGGGCATTGTGCTTATATGGTTGGCGTATCCTTATATTTCAGATTGGCTGGTGGGACCGGTTCATGGTGAAGACCAAATGTCCGCGAACTTTGTTCTGCTGCTTGCCGGGCTGGGGATAGGGTGCGTCGTTGGTGGTCTGGCCGGCGGCCTGGCCTATTCCCGTTTGACTAAGGGATAGCACCATAAACAATGCGTTAAGTATTCAGTAGGCTTATATTCATTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 1981450-1981779 **** Predicted by CRISPRDetect 2.4 *** >NC_020064.1 Serratia sp. FGI94, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1981450 28 100.0 33 ............................ GCAGTATCCGCTTAATGATATTGCCCAGGCGCG 1981511 28 100.0 32 ............................ GAAAACCCACCAGCCATGCTTCGCGATGGTTA 1981571 28 100.0 32 ............................ TCGTCGATATCCAGTTCGCGGCGCTCGGTAGC 1981631 28 100.0 32 ............................ CGGCGACATACCCGCTACTGGCGCAGGCGTAC 1981691 28 100.0 33 ............................ TTGCTGGATGACGCCAATCACCCCGGGGAAAAG 1981752 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 33 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTCGGGAAGGTTTGCTGCACTTCGGTGCGTACCACTTTATCTGCGCCACCGCAGACCGCTGCGGCATCAATGGTTTTCTTTTGGCCAATACCGGCGACAAAGAAGTGATGCGTGGTGGTCTGCTTAGGTGCGGCAACCGTTTGGTTTTTCATGGTGAACGTCTGCTGCGCACAGCCGGTAACCGTCATGGCAAGCACTACGGTGGCGAGTAATTTTTTCATTATTTTCAATTCCCTTTTAATTAATCAATGTAAAGAGTGCGGATAATGACACGCTTACAGAAATTTACAAGTGGAGGTAACAATAAATAGTGTGCTAAGCGAGGAGGGCTCCGCGCCAGAGCGCGGCAATGTAGGGCTGCGCCAATAACCCTTTTTTTAGCACTATGCGTAACCTATTGATATTTAATGGGCGTCTGAGCGGGCGTAAAAAAAGGGTGTCAGCGGCTGAAAAGGGGAAAAAGCTTTAATTATTAAGCCGCTGGCCTTAAACTCTAACAG # Right flank : AAATGTTTGGGAGTCGATAAAAAAAGGCTGGGCGTTCACTGCCGTACATGCCATTGATATAAGACCTGATAATTTTGCACAGTACAGTAGGTGTGAATTAACTGATAAATGCGAAGAGATAAATGTGCTACTCTCGATGAATAATCGGTATTTTTATCTATCACTGGCTGGTTTTTTAGCTTTAAAATTAACTAGCCGATCCATTACGAAGTGCTACACTTTGAATTTTTGGTTAATGTGCGATGGATCATAGGTATGAAGTATAGGAAAAAAAGGACTACGAGTATACGTGAAAGTTTGGACTTTATGGTTGATATGGTAAAAAAATATTTCCCTGTATTGGTGGTATTTTCTACATTGTACGGCTCTTTATTGTTGTTTAATTATTGTGTGGATTACAGCGTTCCGTTCATAAATGTCTACACTGCAAATTATATGCTGGTTTTTGGTATATTGTCCCTTGTAATTATCATGTCCGTTTTAGTTTTACCTATCATATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //