Array 1 259557-256577 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZRK01000004.1 Actinomyces vulturis strain VUL7 Scaffold3_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 259556 36 100.0 28 .................................... CGATATTCGCGCTGCCTACGGCGATTTA 259492 36 100.0 28 .................................... CTGACTCGGCGGGGTACTTTTGATAAAA 259428 36 100.0 28 .................................... CCGATCACGATCTTGTCAATGCTTGAAG 259364 36 100.0 28 .................................... ACTCATCCATCCGGCCGTGTTGGTTCCG 259300 36 100.0 28 .................................... TGTTCAGAGGCTTTGCGTCAGGGAACAG 259236 36 100.0 28 .................................... ACATAGCAGAATACTCACTTGAGCCAAA 259172 36 100.0 28 .................................... ACCCATCGGATCGAAGATGTTGACTTGA 259108 36 100.0 28 .................................... TTAGGCCATGAGATTCCAAGTAGCGCAC 259044 36 100.0 28 .................................... ACGACGTCGATCAATCAACAGGTCACGA 258980 36 100.0 28 .................................... AGGTAGACACCTGAACGATATTGCTGCC 258916 36 100.0 28 .................................... ACCATGAGGGCCTGACCGTTTCCATGCT 258852 36 100.0 28 .................................... CAAGTGCCAAACCGTTTGGCGTGGTGTA 258788 36 100.0 28 .................................... AGTAGAAGTCTCTATACGGCGCGATTTC 258724 36 100.0 28 .................................... GATAAGCGTCACGGAAATCAAGGTCTCT 258660 36 100.0 28 .................................... CGTCCTCGGCGGCGTTTTCTTCCTCGTA 258596 36 100.0 28 .................................... TCTGACGTGACGTAAACGTTCACCACCG 258532 36 100.0 28 .................................... AATTCCTGCAGTCATGTATGCCAAAGGC 258468 36 100.0 28 .................................... CCGCTGGATGGGCTCTGGTTCGCACTGG 258404 36 100.0 28 .................................... CACTTAAGGGATTATTCCTTATGCTTCT 258340 36 100.0 28 .................................... ACGAAGAAGAACTCAGGGCGTATAGGCG 258276 36 100.0 28 .................................... AAGATTCAACTGCCCTCTGAGGGAGATA 258212 36 100.0 28 .................................... CGCGCGTGAACCTCTCTCCAATGGTTCG 258148 36 100.0 28 .................................... CCAGCACTCACACGCCGCCACCTCTTGC 258084 36 100.0 28 .................................... GGACATGTGGTCCCAGATGCTTAAGGCG 258020 36 100.0 28 .................................... TTTCAAGTCGAATGATGAAGCGCAGGGC 257956 36 100.0 28 .................................... GTTTGATGCGTCGTGTTTATTTGAATAC 257892 36 100.0 28 .................................... GTGATGAATCGTGATCGTGTTTGTGAAA 257828 36 100.0 28 .................................... CGTAGTCCGGCTTAATGTCACCAAGCAC 257764 36 100.0 28 .................................... ATACTCAGTTACTTTGTAAGTCCAGTCC 257700 36 100.0 28 .................................... GCGGCGCAGGCTTGACGGTGGGTAACTG 257636 36 100.0 28 .................................... CTCCGGTAAAGACGTTGCTTCGGAAGTG 257572 36 100.0 28 .................................... GGAACAACCACGTTTTCTGCGAGCCAGG 257508 36 100.0 28 .................................... TGTGCTGACCAGGGCAGATAACGAGGGC 257444 36 100.0 28 .................................... GGCTTTCCTACGCCTGGTCAAAGGTGAC 257380 36 100.0 28 .................................... AGCCCCGGACTTTTTCGGCGTGGGTCCG 257316 36 100.0 28 .................................... CGGCGGTGAGGTGGCCCCATGTGAATGT 257252 36 100.0 28 .................................... GCGCAATGACCTGCTCCGGGGCTGGTTT 257188 36 100.0 28 .................................... GGCGCTGCTTCTGGTGCCTCGTTTGCTT 257124 36 100.0 28 .................................... GGTGGTATTCGGTGGGGTCGATTCCGAG 257060 36 100.0 28 .................................... CTTGTGCCTCCAGTGCGCGTGGTTGATC 256996 36 100.0 28 .................................... GGCGATGCGGTGCGGGATAGTGGCGCGG 256932 36 100.0 28 .................................... CTCTTTCAGTACACTTCACGCAGAGTTC 256868 36 100.0 28 .................................... AGGCCCTGCTCGCCTCGATGAGGAGGGA 256804 36 100.0 28 .................................... GGCATGAGCAACAAGAAGAAGAAACGCG 256740 36 100.0 28 .................................... GCAGTGTTAAACCAGTAGTTGTGTGGGC 256676 36 100.0 28 .................................... TGAGGGAGGCATTCGGGGAAAGATCAAA 256612 36 88.9 0 ...A............................TGT. | ========== ====== ====== ====== ==================================== ============================ ================== 47 36 99.8 28 GAAGTCTATCAAAGGGGGAGATAACTAATTCTCAAC # Left flank : ACCTTTTTTGGCAGAGGGAACTCGTGTTTCTACGGCGATGGAATTCCTTGCGCAGGCTTATGGCCGTTATGTCGAAAACGAGGTGGTTTCTTTAGAGGTACCGATTTTCCGTTCAGGGAAGTAAAGATTAATGGCTGATGATCCGATGTGGTGCCTCGTGATGTTTGATCTTCCTACGGAAACGAAAGCGCAGCGACGCGACGCAAATCATTTCAGAAATGCTTTATTGGATTTGGGTTTCTTTAGGGTCCAACTTTCAGTGTATGTGCGATACAACCCGTCTCCTTCTGGTGATCATGCGAGAGTGAAAGCGGTCGTAAGAAATCTGCCTGCACAGGGCCAGGTAACCATTGTTTATCTTTCTGATACCCAGTGGAGTAAGGCTTTTCGTTTTTGTAATGCGCAGGAGCAAGATGCTCCAGAGACTCCTGGTCAACTAATGTTTTTTTGACGTTGAACTTCCAGTTTTGGTTGGAAAATCAATGAAAATCTCCCCCTCT # Right flank : AAATTAACTTCTGATGAGAATTTCTTTGAGGTGTTTACTGGCGATAACTCTTACCCCTCCCGCCGCTCTGGCGGTGGTGCCAGAGCGGCGGTTTGTTAGGGAACTAATTCTCAGCGGGGTTCACTTGAACTGCAAATGCCACGGAAGTTTATCAGTGGGAATGCTGATTATCAACATGTATAAATCATTTTGTGGCTTAAATTCATCAATTCTTCGCCTTCGTAGTAATGGCAATTAGGAAAAATAAATCAGTTACGTTGACTTAATTCAAGAATTAAGCAGTTATTACTAACTTTACTTAGAATGGAGAAGAAAAGAGCGAGAGATGGAAAAGAAAGCAATGGGTAGAAGGCCATAGAATTCGAGTGGATGATGAATTCTGTTGGGATACTCAACTGTGTGGCCAAGGCACCGATTAGCCCTGAGTCTTTTTCTTAGGGGAAGGCGGAACAAACTTGCCGTCCTTGAGCGGGGGAGCGCCCTTCAGATCGGCAATCGCG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAAAGGGGGAGATAACTAATTCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 347483-347775 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV700386.1 Actinomyces vulturis strain VUL7 Scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================== ================== 347483 37 97.3 27 ....................................C GCGCTGGTGGTGAACATATCCGGCCAT 347547 37 100.0 27 ..................................... GCACGGGCACGAGGTCATCGATCACGG 347611 37 100.0 27 ..................................... ATCACACACTCTATATTTTTTGCCCGG 347675 37 100.0 27 ..................................... ATCTGTGCGGCAATAAGCGATGGTGTA 347739 37 94.6 0 .......................C..A.......... | ========== ====== ====== ====== ===================================== =========================== ================== 5 37 98.4 27 GGTGTAACCCGAGGGGCTACAGAGCTGAAATCCAACA # Left flank : CCAAAAAGTTCATGGATGATTTAGACGCAGTTCCTTCCTCAGCAGTCGATTCTCTGCTGTCTCAGGTTTCTGAAGTCACCATCACTTCCGCTAAGTGACATCTCCACTAGAGGTGAGAGCACGGGCCGTCTCTTCGACGGCCCGTGCTCTCGTGTTTACAACGCATTTATTTATTACAGTTTTACTAAAAAGTTTCAACTATTTAAATACATTCCCCATATACTTCAGAGTCGTTTATTATGTCTACATATATAAGAATGTGCATTTTTAGTGCGATCAATTTTCTCGTTGTTATTTCTTGCGAGAAAGTCTTATTAATATTGCGCTGACACCTGCCTTAATTATGATCGGGAAAAGTTTTGAGAGTAAACATTTTCTGCAGCCGACCAAATATCTAAGAATTTGCTTACCCCCACTAGGTCGATGCCTAGCGGGGGTAATGCTCCCACCCACAGTGAGATGGGGAATGTCCCTCTATTGCTAGAGGTTGTTGGATCTCA # Right flank : AGCCAGAGCCAAGTCTGTCACTGACGGGCAACGCACGATAGTTGTCTCGCTCTTATCATAGGGGTTTTCAAGAACCAGTTTGCCGCTATTGCATGCGCGCACGATCCATGTCCGTCCATTGACTTGTGCCTTTGAACCGAGTTGGAGCGCGCCAATGCGCTTAGCGTCGCCAGAATGAATGGCCAGAGCGTCTTTTGTGGATAACTGGCGCATGGTCATAGATGACTTGGGCAACTTCGCATAGAACAGCGAACCCTTTTTGCCAGCAAGATCGCTGGTGAACACGCGCTGGAAAATGTAGCGGTCCTTGTGCTTGAAAATGCGCACATGGTGCACGCCTGCACCAATGAGTGCCCATCCCCCGCGCACGGCCACACATGCGCTCGATGAACCAAACAGATCAAGTGTGCCGTCACTGTGTAGGCCAGCAACAGGCTTTTTTGCTCGACGGTTAGCATCAGCAGGCAAGCCACGCGTGGGCGAGTATGAGGCAAACGAGG # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.13, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGTAACCCGAGGGGCTACAGAGCTGAAATCCAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 350894-351313 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV700386.1 Actinomyces vulturis strain VUL7 Scaffold4, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 350894 36 100.0 28 .................................... GCACGTGTCCACTGTTAGCAGTGTTCAC 350958 36 100.0 28 .................................... TGACGTTGAACGTGCCGCGCTATGGCCT 351022 36 100.0 28 .................................... TCCGTTCTACCTGGTGGGCCTGCCACCT 351086 36 100.0 28 .................................... CTATCCGGTGTTATTTACACGCCGGAGG 351150 36 97.2 28 .......................T............ TCCCTCACTTGAGCCTCCTGACGGTGAT 351214 36 97.2 28 .......................T............ TGGACTTCATCGACGAACTTGGCAAGGC 351278 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 7 36 99.2 28 GGTGTAACCCGAGGGGCTACAGACCTGAAATCCAAC # Left flank : TTGTGCACGAACAGACCAGAACTGGTCTCCTGGAATATCGGTTTCAGGCAAACCCAGGCGGTCAAGAAGATTATCTAGTGCCTTGAGACGTTGCTTACGAGTCTTTTTAGCGTTACGCGCACGGCGTGCCAGGCCGTTGTTGTGGCGGCGGCTGACCTTTGTTTTTTCATCGCGCGGTGACACTCCCCCGTCGTGGAGTTGAGTGTAAGCTTCCAAAATGTTGACAGGCTTACCGTCTGCGTACTGGACTGCTGAAAAGCCCAGTGATCGGATTCCTGCGTCAATGCCGATTACGTATTCCACGGTGGTTGTCCTCTCTGAAGTAACTGACAATTCACTCATGGTCGGAGTGTGTTGGCCGATGAATATTATTGAAACATGCAGCAAAAGCGCTCCAAGAATTTGCTTACCCCCACTAGGTCGATGCCTAGCGGGGGTAATGCTCCCACCCACAGTGAGATGGGGAATGTCCCTCTATTGCTAGAGGTTATTGGATCTCA # Right flank : CACCAGTCTGATTCGCCCTGGGTTTTGTTCCGTCATTGGGTCGCTAACACCCGGGCGGTGTCATCGGCATAATACTCCTCTTCCACCTCCTGGGGTGTACATAAACCAAGTTCACCGTGAAGACGCTTAGTGTTCCACCAATGAACCCAGCTCATCGTCTCATACTCCACCTCAAAAGCACTGTTCCACTACCGCGAATAAATCAACTCGGTCTTGTATAGGCCATTGACACTCTCAGCCATGGCGTTATCGTAAGAATCACCTGTTGTCCCAACAGAAAGTTTGATTCCCTGCTGTCGCAGATGCTCAGTGTAGAGATGGGATACGTACTGGCTGCCACGATCACTGTGATGCACCAACTGGCTCATGTCCCCAGTAGCACACGCTAAGGCATGATTAAGCGCCTCTAGAGGCAAAGCCTCTGTTTTCATGGAGGTACGCACAGCCCACCCCACGATTTTGCGACTAAACACGTCCGTGACGAAAGCCGTGTACACAAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGTAACCCGAGGGGCTACAGACCTGAAATCCAAC # Alternate repeat : GGTGTAACCCGAGGGGCTACAGATCTGAAATCCAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //