Array 1 479192-478428 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LR134287.1 Neisseria animalis strain NCTC10212 chromosome 1, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    479191	    35	  83.3	    30	A..-...T.A..G....T..................	CAGTATGCCTGTCGGTATGTTGTTTTCTTG	AA,C [479179,479186]
    479123	    36	 100.0	    30	....................................	TGAAACGCCTCCTCTGCCGTGCTGGGGTAC	
    479057	    36	 100.0	    30	....................................	TACATAGTAGTTTTCAGCAATATATGACTT	
    478991	    36	 100.0	    30	....................................	ATTGCTTTGTTCGGCCTCAAACAAAAATTC	
    478925	    36	 100.0	    30	....................................	CCGGCACACCCGGCACCGGCAAAACATCTA	
    478859	    36	 100.0	    30	....................................	TCAGTAATGCCCAAGGAGAAGTCGGCAGGA	
    478793	    36	 100.0	    30	....................................	ATTTTTTGGTTGCTGTAGGAGAGGTCTCCA	
    478727	    36	 100.0	    30	....................................	TTCATACGGCGCAGCGCATCCAGCAGCTCA	
    478661	    36	 100.0	    30	....................................	TATAAGCTTTATATAAGAAGTAGGGTTAGC	
    478595	    36	 100.0	    30	....................................	TAACGCTCGGCTTAGGAGCGAAAATGTACA	
    478529	    36	 100.0	    30	....................................	ATGGTTAACGAAGGCGCGGGCTGATGTAAT	
    478463	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  98.6	    30	GTTGTAGCTCCCTCTCTCATCTCGTAGTGTTACAAT	                              	       

# Left flank :   CGGCCCGGGCTTGGGCGTACGCATTTTGGGCGAAGTGAAAAAAGAATACGCCGACCTGCTGCGTCAAGCCGACGACATCTTTATCCAAGAATTGCGCAACACCACCGATGAAAACGGCACTTCATGGTACGACCTGACCAGCCAAGCATTCGCCGTATTCCTGCCGGTGAAATCCGTGGGCGTGATGGGCGATGGCCGCACCTACGATTATGTGGTGGCACTGCGCGCCGTCGTAACCAGCGACTTCATGACCGCACACTGGGCGGAGCTGCCGTATTCCCTGCTCGGCCGCGTGTCCAACCGCATCATCAACGAAGTCAAAGGCATCAACCGCGTGGTGTACGATGTAAGCGGCAAACCGCCCGCCACGATTGAGTGGGAATAAAATTTAATCAAAACTAAGGCCGTCTGTATATTTGCAGACGGCCTTTTCATTGCTGCTTTTTCAACAATATATTATTTTTAAAATCATAATGATATGGTGTTACTTAACCTTGCCA
# Right flank :  AGCCAAGCGGGGAATCCTTGAAAAACAAGGGTTCTCCGCTTTATTTCTGCCTAAAATTCCGTTTTAAAACAGCAAAAGCTGGTCGGCATTCACCTTTTTTTCACGCGTTTTCGGCTCGCCAATCAGCATCACCATACCCGCATATTGCTTTTCCGTTACCTCCAAATAACGCACCTGCCCTTCTTCGGGCAGTTGTTGCAGCAGCCTTTTGTGGTGTTTTTGCAACGCATCGCGCCCGCGAACGATGCGCGAATATACCGAAAGTTGCAGCATCTGGTAGCCGTCTTTCTGCAAAAATTTGCGGAACCGGTTGGCTGCCTTGCGCTTGGCAGCGGTGGTAACGGGCAGGTCGAAAAAGACGATTAAGCGCATAAATTGGGCCTCACTCATAATCATGCTCTTTCAGAGGCAGCATTTGCGGCAGCTTCAGCAGTTTGGGATTGTTTTCGGTTAATGCCGTCTGCAAAGACTGTATGGTGCGGTCGATCGCGGCCAGCAGG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTCTCTCATCTCGTAGTGTTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTTCCTCTCTTATCTCGTAGTGTTACAAT with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//