Array 1 222567-223658 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBKZ01000014.1 Streptococcus agalactiae strain BE-PW-095 ctg7180000005385, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 222567 36 100.0 30 .................................... ATAATCTTCTGAAATTGTTGCTTCGTAATA 222633 36 100.0 30 .................................... CCATCCAACCATTTGATTTTGTGTAAATAT 222699 36 100.0 30 .................................... ACACCGTTGCGGTTGTTGTCGGTCACTCAA 222765 36 100.0 30 .................................... TCTATTAACAATAGTTTTATCCAATTGTTT 222831 36 100.0 30 .................................... TGAAAACAAGCGCAAAGCTGTCAGAAAACA 222897 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 222963 36 100.0 30 .................................... GGCGAACTTGTAACGTTTGACGGTAATTTT 223029 36 100.0 30 .................................... TAATGTCTTTTCCTAGAATGTACATTTCTA 223095 36 100.0 30 .................................... TATTTCATCATAGAAAATCCTGCTAGTGGT 223161 36 100.0 30 .................................... GCGATGATGGTAAGTCATCATGGACAGCGT 223227 36 100.0 30 .................................... TTTTACACACGATGTCAGATATAATGTCAA 223293 36 100.0 30 .................................... AGTACTGCACTAGGAATTGTAGAGATCAAA 223359 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 223425 36 100.0 30 .................................... CCGATTATTTCCTACATAATACGCACGTTT 223491 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 223557 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 223623 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //