Array 1 30587-32302 **** Predicted by CRISPRDetect 2.4 *** >NZ_OCTT01000002.1 Anaeromassilibacillus sp. Marseille-P4683, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================================================ ================== 30587 33 100.0 37 ................................. GAGTGAGTACAAGGATTTAGCGTATACGCTTGGATGG 30657 33 100.0 33 ................................. TGCCGGCCCTCAGTATAATAGCTGGGGGCCAAA 30723 33 100.0 36 ................................. TGCCGAAAGAGATCCAAACACCTCTCAAAAAGATGG 30792 33 100.0 38 ................................. TGTCGGATTTGAGGGAAAGCGGCGACATTGAGCAGGAT 30863 33 100.0 64 ................................. GGTACCGACACAGCTAACACAGTAACGGAAGATGACAGCGAATCGCAGTCCTTGGAAAAAGCAA 30960 33 100.0 34 ................................. TTTGGGCGTGATCGATACATTTTCTTCCTTACGC 31027 33 100.0 33 ................................. TTGGTGATGGGACTTCTGAGGCTGTATTCCAGG 31093 33 100.0 36 ................................. ATATAGACTATGGCGTAACCGTTTGGAATGATGGTG 31162 33 100.0 35 ................................. ATGCTTGTGGGTGCTCTGTACTATGGAAATATGTT 31230 33 100.0 35 ................................. ACGCCGGCTCAAACAGAACGCACATTCGACATCTA 31298 33 100.0 35 ................................. GCAGAGTTGGCCACCAAAGCGGCGGAGAATGCCCC 31366 33 100.0 35 ................................. ATGACCATCGATCTGCAATGGCTGGCGGCTATCGT 31434 33 100.0 36 ................................. ACACAGCAAGAAAGGAAGCTGGAATAGCCGAAGAGG 31503 33 100.0 39 ................................. ACAGTCTGGGGGAAGTACATAATGATCCGAACACAAGGA 31575 33 100.0 36 ................................. GTCACGTCTTTCCCCAGTATGTAGTTGCCCTCTACT 31644 33 100.0 38 ................................. GCGGGCCATACTGATGTTGATCCCCGGCAGTGTGAGCA 31715 33 100.0 34 ................................. AGCGATGGGAAGTGGATGGAAAATGATGCGGAAA 31782 33 100.0 37 ................................. GTGAGTGCTGTGGTATCACCAAATGCGGTGCCACCTG 31852 33 100.0 36 ................................. GGAGATGGTTCCGGCTTTGAACACGTTTTCCCGGCC 31921 33 100.0 36 ................................. GACAGCCTGCATGATCTCTTCGTCTTCGGTCTCCAT 31990 33 100.0 37 ................................. CTGTTTGGAGTGGGATGTGCCTTGCATGGATAGCCTG 32060 33 100.0 37 ................................. TACCAAATCCTATGCTATCATATGGGTGTACCGAGGT 32130 33 100.0 36 ................................. GTACCGGAGCGTGGCCGCCGCGCGAGTGGCGGCCCT 32199 33 97.0 38 .........................G....... GTCAACTACTACATCATGAACACCAATGGTAACAGGAA 32270 33 72.7 0 ...A.....TT..T...A..T.C..T..A.... | ========== ====== ====== ====== ================================= ================================================================ ================== 25 33 98.8 37 GTCGCACCTCACTCGAGGTGCGTGGATTGAAAT # Left flank : GAAATAAAATGCTGGTTCTCATCACTTACGACGTCAGCATGGATACTGCTGCCGGACGTAAACGGCTTCATAAGGTCGCTAAAACCTGTGTGAACTGGGGTCAAAGAGTGCAAAACAGTGTGTTTGAATGCAAAGTGGATGCCGCTCAATATGCACAATTAAAAGATCTTTTATCACAGATCATTGATCTGGAAAAAGACAGCATCCGTTTTTATAACTTGGGAGACCGCTATCATAGACGTATTGAACATATGGGAATTCGTCCAGGATATGATGTTGAAGGTGTCTTGATGGTGTGATATTTCCTATTTCTCCCTTATGTTATCTCTGGTGCGACAGATAAGCTATCAGAAAATTGCCTAGTCTCTCGCACCAGATTAATGGATGATAACCATCCTTTTTCCCAAGGGAAATGTATACTCTTTTTATGTTGTTTTTCTTTTGTCTTAGGATTCTGTTTAAGTCTACAAGATCAGCAATTATTTTTGTCTGATTTTGCC # Right flank : TAATGTCGCAGCTTACTCAAGGTATAAGGGTGTCTTCTTTTCAAAAATCCATCCTTGATTTTTGGAATTTTTCTGTGCAAAAAAGATCTTGACATCTTTTTTTATCGCTTTATAATTGATATGTCAATTGTTGATATATCATGAGGTGATACACTTTGGAAAATACTTTTCACATGTTGTTGTATCGAGCTTTTCACGCTCAACGCAATTATCTTCGTCCGTTTTTGGATGATATTGGCCTTGGTTCCGGTCAGCCAAAGCTCATCGCTTATCTGGCGGAAAAAGGCCCTTGTCATCAACGTCAGTTAGCCGACTATTTTGAAGTGGACCCTGCTGCTATCTGTCGGATGCTCGATTCTCTCGAAAAGGGTGGTTTTATTGTCCGTCAAGTGGATCGCTCCAATCGACGCGCCGGTTTAGTAGGCCTGACCGATAAAGGAATACTGGCCAATCAAATGTGGCAAAATCACTGCCGGGATATGGAGCAAGTTTTGTTGAAT # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACTCGAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 806875-807512 **** Predicted by CRISPRDetect 2.4 *** >NZ_OCTT01000001.1 Anaeromassilibacillus sp. Marseille-P4683, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 806875 32 100.0 39 ................................ TCTACGTGCAAGCAGTTCACAGGGTATTTCCCGGCTTAC 806946 32 100.0 33 ................................ TCTACTACAGTATTGGTGGAAGTCTGGTTTTCC 807011 32 100.0 33 ................................ GAAATGAATACTACGAGAAAAGAAAAATCTGTA 807076 32 100.0 38 ................................ CGGTGGTATCTTCTACGTCTCCAGCGGTTGTATTGTAT 807146 32 100.0 36 ................................ TTTCTGCGACGCTGTATCGTGCATGACAGGATACAG 807214 32 100.0 36 ................................ TACTCCGATGAGGCCGAGAGCGGTACGAATACCAAC 807282 32 100.0 34 ................................ GTTATGCCCGCGGTACAAAGCAAGTGCTGGATAC 807348 32 100.0 35 ................................ TTTCATAAGCGAAAGAAGTCAACGGAGTAGTAGTG 807415 32 100.0 34 ................................ AGCTTCTCGATGATGGAGGCGCGGGTGACGGTGG 807481 32 93.8 0 .......T............A........... | ========== ====== ====== ====== ================================ ======================================= ================== 10 32 99.4 35 GTCGCTCCCTTCTAGGGAGCGTGGATTGAAAT # Left flank : CGTGGGGATCGGGATCCTGCTTGCACTTGTGACAGGGGCCAATATCTTCACAGCCCTATCCATCAATATAGCCTATTCCTGGGTAGGGTGTATCCTGACCGGTATCCTCATCAGCCGGGGCAGCAACTATCTTTCCGATCTCCTGCACAGGCTCAACCTAACCAAGACTCAGTAACACATAGCAAGGCCCGCTTCCGATCGTCTGACCGGGGCGGGCTTTTTTGCATATCAAAATAATATAGAACAATTTTCTATATTTTCTTGGAATCTCCTGCAAGCTATGCTATATTGAATTTAAAAGGGATCCTATTCATATCTTTTTGCCTCTTTACTCTTTCTAGTGCGAACTATGAGTTATCATAGAATCCCCTATGTTCTCGCACTTTATTGTAGTTCACTTTGTTCTATCCTTTTCAACCTCTACTTTATCAAACGGATTATATTTGTATAGGTTGCTTTCTTTTTTTCTAAGATATGTCTCTACTTTCTCCCTTTTTGCT # Right flank : TGAGGTACAACTGTCGTAGTAGTGTCGTAGTGATGCAACTCCCTGTTCTCTCAAATAATTTCCGGGCAAAACAAAAGACCACATGAACGCCCATTTTACTAGGCTTCTCGTGGTCTTTTTCTTTGGTGCGGATAACAGGACTTGAACCTGCATGGACTTGCATCCATTAGAACCTGAATCTAACGCGTCTGCCAATTCCGCCATATCCGCTTATTTCAAGCACCTCAGCCGTAAGGTGCTTGATTATTATATCGCAGTGAAGGCACTTTGTCAACACTTTTTTAAAGATTTTTCGCCAAATTTTTCAGATAAATTCGGAACGCTTCTCCTACTTCAGGATGTTTTAAAGCTACTTCACAAGTAGCTTGTAGAATGCTCAATTTATTGCCCATATCGTATCGTACACCTGTGTAGTCTACACCGATCATGCTTTTCTCTACAGTCAGTTGTCGCATGGCATCCGTCAACTGAATTTCTCCCCCACTACCCGGTTGAGTCTT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCTAGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.50,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //