Array 1 165557-171688 **** Predicted by CRISPRDetect 2.4 *** >NZ_OCTS01000003.1 Corynebacterium dentalis strain Marseille-P4122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 165557 29 100.0 32 ............................. ATCGACGTGATGCAGCGCCACAGCCCTGGTCT 165618 29 100.0 32 ............................. CAGGCAGGTATGGGTGCCTACTACTGGGCAGA 165679 29 96.6 32 ............................T TGCTCGATGAAAGTACTTTTGCGCTCGACCAC 165740 29 100.0 32 ............................. AATCTTCGAAGCGATCTTCATGCAGCGAGCAT 165801 29 100.0 32 ............................. TGGCTGATCATTTCTGGGACGCCATCCTCGAA 165862 29 100.0 33 ............................. CCACGATCTAGAAGTATCGCCAGTCATCGTGCC 165924 29 96.6 32 ............................T AGCGCTGATTGATAGGCATTTAACAACCTTCG 165985 29 100.0 32 ............................. GCCTGACGCTATCTCCACTGAGGATTTGATGG 166046 29 100.0 32 ............................. CAGCCAACGCCTGAGCCTTCTCCTCATCGGTC 166107 29 100.0 32 ............................. ACGCCCGCTTCGTCGCCGTGCCCGGACTCCGA 166168 29 100.0 32 ............................. CCTCCTGATCAAACACAATCCCTGCATCATCC 166229 29 100.0 32 ............................. TATCCCAGTGGGAAACGGCGTTTCGGGCGGCG 166290 29 100.0 32 ............................. GACCTGGTGCGCATGTCCGATGTGCTTAAGGG 166351 29 100.0 32 ............................. GCATACGCGCCTGAACCGGAGTACGCCGCCCC 166412 29 100.0 32 ............................. GTTCGCAGAAGCGGGAGGAAGAATCCCGCAAG 166473 29 100.0 32 ............................. CGATCCCGTCGAATGCTTGCGGTCGATCAGGC 166534 29 100.0 32 ............................. ACCCCTGTGTTGGCCATTATCTCCAGGCCTCA 166595 29 100.0 32 ............................. AACACTCACCATGTGGCGGAGGGGCTAGGCTG 166656 29 100.0 32 ............................. TATCCCGCACCGGCGTCGCCACCATGTGCGGA 166717 29 100.0 32 ............................. CCAACCCATAAGGAAGTAACCCCCATGTCCCT 166778 29 100.0 32 ............................. GTGGTGATCTCTTGCAGCGTGGAACCGCCCGA 166839 29 100.0 32 ............................. ACACCCCGACCCCCGGAGGGCACACCCCAATG 166900 29 100.0 32 ............................. GAGACGCGAAACATGATGCCAGTGCGAGCAGA 166961 29 100.0 32 ............................. ACCCAACTGGCGCGGCGACCCTGTGTGGCTGG 167022 29 100.0 32 ............................. CCCCGTGATCCCCTGCCCATATGGCAGCTACA 167083 29 100.0 32 ............................. CCGTCAGTGGTGGTGATCTCCATCCGCTCCAA 167144 29 100.0 32 ............................. AATGGTAAAAAACTACAGGTATTCAGGTACCA 167205 29 100.0 32 ............................. CTCAGGGGCGAGCGCCATCGTGAACGGAATAT 167266 29 100.0 32 ............................. GCTTCGTCTGCGGAGATCACGGGTATTGCCCA 167327 29 100.0 32 ............................. TCGTTGAGGTCATCGTAGGAACCGGCCTTCTC 167388 29 100.0 32 ............................. CAACGAGCAGCGTTCTGCATCTCCGGGGTTGT 167449 29 100.0 32 ............................. GAGTAGAGATTCTTTTTCTGTTTGCCCTCCTT 167510 29 100.0 32 ............................. CGGGCGCGCATTTTTTGGGTGTGCGGTTTCCT 167571 29 100.0 32 ............................. CTGCGCAGTAGCGCCCGCCATATTGCCTATGC 167632 29 100.0 32 ............................. AGTGGATTTCAGAGGGGCTAGTCATCGCTAGT 167693 29 100.0 32 ............................. GGCGTTCCATGCCCTCTTAATGCCCTTGTTGT 167754 29 100.0 32 ............................. CAGCCCTTCAGCGTGTCCAAACCACGACCGAG 167815 29 100.0 32 ............................. GTCAGGAGCGGAAGTGTCAGACTCGAAGCGAA 167876 29 96.6 32 ............................G TCGATCGCGTGGCGAATCGACGCGGTAGAAGT 167937 29 100.0 32 ............................. CCTTTGTGTATGGCGTTGTGGATGGGTGGTGG 167998 29 96.6 32 ............................T TTCGCTGACGGTGGCGACAAGGCTTACACTTT 168059 29 96.6 32 ............................G TCGCCGTTGCCCCACTGCTTCCAGCCGGGCAG 168120 29 100.0 32 ............................. ACCCCAGCCTTGGTTACTTTTTCAAACCTCTG 168181 29 96.6 32 ............................A CAGTGGGATAAGAACCAAACCCAACCTGCGGT 168242 29 100.0 32 ............................. CAGCCGAACACGGCAGTGAGCAGCACACCTAT 168303 29 100.0 32 ............................. AGGGCGCGTAGTTGGTCTTTGGTTCCCTTGAA 168364 29 100.0 32 ............................. CGACCTGCTGCTGCAGCTTCTCAATCTCATGC 168425 29 100.0 32 ............................. TCAACTGGTCAATATTCATACCCGCAGCAGGC 168486 29 100.0 32 ............................. AGATCTTCTCGATCTTCGGCATTGTCAGGCAT 168547 29 100.0 32 ............................. GCGGACATACCACCTGCTGCAGCGCCACGGGC 168608 29 100.0 32 ............................. GCTGGCAATGGCGTGGTGGCAAACATCGTCGC 168669 29 100.0 32 ............................. GATTAGAGTCTGTGGTGCGATTGCTGTTCTTC 168730 29 100.0 32 ............................. AGTCACAGGCAAAAACGGAACACCCCGAAAAG 168791 29 100.0 32 ............................. ACAATCCACGGCCCGTGATCAGGGAATACTCC 168852 29 100.0 32 ............................. CTGCTCAGCAGACCCCAACACCGCCTCGATCC 168913 29 100.0 32 ............................. ATTGCTTTGGTGATGTACCCGTCTCCATAGTC 168974 29 100.0 32 ............................. CGTCCGCGTCTTTGTCGCATCATATTGGTCTG 169035 29 100.0 32 ............................. GGGTGATTTGTCTCTGACTGACGATTATTTGG 169096 29 100.0 32 ............................. TGTGGGTGGTTAGCGCCAGCAGCAGGGCCGCC 169157 29 100.0 32 ............................. GTAGATTTACACCGCGTGTGGCTGTGCGGCTT 169218 29 100.0 32 ............................. TCGTCTCAGAGTCCTTAGCCTTACCCTCCGCG 169279 29 100.0 32 ............................. GCATGGTCTTTCTTTCCTGTGTGGATGTAGTG 169340 29 96.6 32 ............................G TGGTATCCCACAAATAGGGACGCATAAAGAAG 169401 29 100.0 32 ............................. GTAGATTTACACCGCGTGTGGCTGTGCGGCTT 169462 29 100.0 32 ............................. TCGTCTCAGAGTCCTTAGCCTTACCCTCCGCG 169523 29 100.0 32 ............................. GCATGGTCTTTCTTTCCTGTGTGGATGTAGTG 169584 29 96.6 32 ............................T GATCCAGTCGATGCTGACTGGGCAATGAGGTT 169645 29 96.6 32 ............................G TGGTATCCCACAAATAGGGACGCATAAAGAAG 169706 29 100.0 32 ............................. TACGGCATCGCACAGTTGATGCAGCGCGATAA 169767 29 96.6 32 ............................T CCGATGTAGTCCGTGCCGTTCACGCTTGTGCG 169828 29 100.0 32 ............................. AAATTCACCACACCAGCCAACGCGGTACGCAT 169889 29 100.0 32 ............................. GACTCGCAGTTCAACCGCCGGTTCAGCATGAT 169950 29 100.0 32 ............................. TTGAACGGGATGGGTTCATTGTTCTCGCTCCT 170011 29 100.0 32 ............................. GCACTGGCAGACCGTGGTGACCTTGAAGGCGT 170072 29 100.0 32 ............................. CGTCTACCATCGCCCGGCTGTGTGTTGCCTAG 170133 29 100.0 32 ............................. GGGCTCGTGTCTGTTGTGGAGTCCTATGAGGT 170194 29 100.0 32 ............................. CAGTACGATTCAACGCCATACGCACAGTAGAA 170255 29 100.0 32 ............................. CCCATCCCACCTGCTAAAAGGCTATAAATTGG 170316 29 100.0 32 ............................. TGGCACGGGCCGCCTAAGCCTCCTACCGGGGC 170377 29 96.6 32 ............................G ACCGATGACTGGGAGACATGGAGCGCAGGGGC 170438 29 100.0 33 ............................. GCGATACGTCCGCCAGTTGGCGAGAAGAACTCA 170500 29 100.0 32 ............................. GCTAGTAGGCACAACCTCATACACAGCAGACT 170561 29 100.0 32 ............................. TGGGATTCCAATGCTGCGGCGGGCACTCCATC 170622 29 100.0 32 ............................. GGCCCCACATTCTGACCGTTCTTAAGGTTGTT 170683 29 100.0 32 ............................. AGCGCCCACAGGCGCGAGTGCTCCTGCTTCAG 170744 29 100.0 32 ............................. AGACGATGCCCCTGCAAATATGGGGGATCATG 170805 29 100.0 32 ............................. GGCCAAGAATGAATGGCAGGCTTCGTATTCTA 170866 29 96.6 32 ............................T TCGACGCATAAAAATGCCGCAAAGCATGGAAC 170927 29 100.0 32 ............................. AGCGGTACTCCGTCTACCTCCACCGTGTGCGC 170988 29 100.0 32 ............................. AGCGGTACTCCGTCTACCTCCACCGTGTGCGC 171049 29 100.0 32 ............................. TTACCCGCATCGATTCGGAGCTAGATCGGCGC 171110 29 100.0 32 ............................. CCGGAAGAGCATCGGAATGATCCTGACTCCTG 171171 29 100.0 32 ............................. GGCGCGTGGGGCACGACCGCTGACCGTATGGA 171232 29 100.0 32 ............................. ACCGCTACTGGTCGCCCCACTGAACGACTTGG 171293 29 100.0 32 ............................. AGTGCCGAATGACGAGTTAGCTTCACTAAGAT 171354 29 100.0 32 ............................. AGATCGTCCACGGTCCAGGACATGCGGAACGT 171415 29 100.0 32 ............................. GGAGCTAGCGGGAGCGCTGCGCACAAGTACGA 171476 29 100.0 32 ............................. CGGGGAGAACACCACCAGTCGCATACTTCCCA 171537 29 100.0 33 ............................. CGTCCGCGATTTCCTCCATGTAGCGCAGGCCAG 171599 29 100.0 32 ............................. CAGTCGCTGAGATCACTCCAGCCCCTGTTGCT 171660 29 96.6 0 ..................A.......... | ========== ====== ====== ====== ============================= ================================= ================== 101 29 99.6 32 GTGCTCCCCGCTCACGCGGGGATGATCCC # Left flank : TGAGCAAGAAATCGAATTCCTTGCTGACGTCGTTTCGCTTTGGGATGAAAAAGGCGAAGATGCTGTCAGTGGCCACAACTACGCAGAGGGCGCTGGTGAAATGTGATCACGCTAGTTGTTTCGGTAGTCCCGCAAAAGTTGAGAGGCCACCTCACCCGATGGCTGTTCGAGGTACACCCCAATGTATTCGTAGGGAAGGTGAATGCGAGAGTTCGAGACAATCTATGGAACTTAGTTCGGGAGAATGTCTCGACTGGTAAAGCAGTCATGACCTACCCAGACTCAACACAGGAACAAGGTTTTGCGATTCGCACTCACCATTCTCAATGGGAGATGAGGGACTTCGATGGTCTGATTTTGCCACTTCGACCCGCTGCCTCAGCACCTAGCAAAACCAAGGCAGGTTGGTCACATGTTTCACGCAGAAGGGCGAACGCCAGACGAAAGCGAAAGTGAAGTAAAATCAGCATTTGGGATCGAATACACGCTGGTCATTTAGT # Right flank : CAGGTCAAGTGCCAGTTCCCGTGCATTGGCAGGGATAATCCCGAGCGCACGGTCGCGAAGGATCCGCAGTCTCCTTCCGAATCATTTAAACGGAGACTCGCCGCATCGTGAGAAACGCACATCCGGCCCAATTGGGCACCGCACCGGAGAAACGGGAACTGCTCCGCCCTACCTGTCATGCCGGGAGTGATTGTTGTCGCTATTGCGGCACCCCATCGCGCCCCTATGGGTTGCGGGCTTTCGGCTGGATGTTGCCGCCCAGCGCCCAGTGAGAAGCGCTGGTGATCTTAGAGCAGGAGTCTAAGCCTCGGCGGTGGCGGTCGGGTTCGTCCCGTCCTTAATGTCTTTTCGGAGGAGTTCAATAACCCACGCCCCGGGGTACTCCTTCTCGATACGCTCCACCGCAGCAAGAGGCAGTAGCCTTCATAAGACGCTTGCAGCGCGAGCTCGAACACACCATCCTCGACTTCACCTGCACCCCGGGAAAGTTCGGAGTAATC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCTCACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-12.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //