Array 1 51517-50068 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH413850.1 Legionella drancourtii LLAP12 scf_58, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 51516 31 100.0 36 ............................... ACCAACAAACCTACGTGGTACCCCTTTAGAATCTTG 51449 31 100.0 36 ............................... TTGTAATGACGCACAGATAGTGTGGATTATGGGGCG 51382 31 100.0 37 ............................... ATAATGACTATCACCAGGCTAGTAATCAATTGTAAAG 51314 31 100.0 37 ............................... ATAACCTTTGATAAAAATATTATCAGTATGGAAATCG 51246 31 100.0 37 ............................... CCCTACTTTTAAAAAAGAGTATGACTATTTTACATGG 51178 31 100.0 38 ............................... CGGCACTACTGCTAATCTATTATCTATATCTTTAACCG 51109 31 100.0 35 ............................... CTGTTACTTTATAGTCAATCGCATCAGTGATTGGG 51043 31 100.0 38 ............................... ATCTATACTCCATCCATATCTAGCTATTAGCAGTGCCG 50974 31 100.0 37 ............................... TAGGCTTATCCGATCAGTCTATGGACTACTTATATCG 50906 31 100.0 37 ............................... AGGGCATATGTAATATCAAATGGCAGTGTAGGGGTAG 50838 31 100.0 37 ............................... CCCCAGTCTGTTGCCATATGTCACCTTCGTCATAAAG 50770 31 100.0 37 ............................... GGTTCAGCAGGTGCTATCACAGGGCGAAATGCGGGTG 50702 31 100.0 36 ............................... ATTGAGATTACTTAAGTCTTGCCTAAATTGTTGCTG 50635 31 100.0 36 ............................... AAACTAGTTCAGGTCGTATATATGAAGAGTATAGTG 50568 31 100.0 35 ............................... CTTTGTCCACAAGTGCAAGTCCTGCGCTTGCCATG 50502 31 100.0 38 ............................... ATTACTACGTATCGCATTAAGTATATCTATTAAGTGTG 50433 31 100.0 37 ............................... TCTGCTATATGGTCTAAGTACATCTCTAATACTTCTG 50365 31 100.0 34 ............................... GAGCCACTCCGATGGAAAATCAAAACTGTCATTG 50300 31 100.0 36 ............................... GACTATACTGTTCTGGCAAAGTGTTGTATCCCAAAG 50233 31 100.0 36 ............................... GTAGCTCCTAAAGGGTGGAAGTGTGTGTCGATCGAG 50166 31 100.0 36 ............................... ACCGGACTATAGGTGCAAAGAGCATAACATCATGAG 50099 31 90.3 0 ............................GCT | A [50070] ========== ====== ====== ====== =============================== ====================================== ================== 22 31 99.6 37 TCGCACCCCGTGCGGGTGCGTGGATTGAAAC # Left flank : TTCTATCCACCTTATTTAATGAAATAATTATGCTTATACTTATTACATATGATGTAAACGTAACGACGCCAGGTGGTCAAAAGCGTCTGCGTAATATTGCAAAAATTTGTCTTGATTATGGTTTAAGAGTACAAAATTCAGTATTTGAGTGTGAGGTTGATCCGGAGCATTTTGTTACCTTAAAAAAGAAACTAATGGAACTAATTGATCCCCAAGTTGATAGTTTGCGATTTTATTTTCTTGGCAAGAAAGGAAAAAATAAAGTTGAGCATGTAGGCGCAAAAGTAATCCCGGATCCATTGTGGGATCCATTAATATTGTGATCCGCTAACCATTAGTACTCATGAAAACCCCAGGGGGTTAGCGAAATCTAATTAATTGATATTTAAGTATTATTTTTTTGAACTATTTTTAATTAATTAATGATGTGTATTTTTAAAATACATTAGCGGAATATCGCTTTTTTTTCGTTATTTTTTAATGTATTACTAGGTGGTAAG # Right flank : CTTGCATAACATCAAGAATTGATTAAACTTGTTAATTTTTGGCAAGGATGTTGATGAAGTTTGAGCAAATCAAAGAAGAGTCTTCAGATGATTTTCGTAGACTTACAGGGATTAAACGCACAACTTTTGATGTGATGATAAGGATATTGAGAGAGGCAGAGTTTATTCTTAGAGCTCAAGGCGGCAAACCAAATAAATTGGCAATTGAAGATAGACTGCTTATGACCCTAGAGTACTTGCGCGAATATAGAACATACTTTCATATTTCACGTAGCTACGGTATCAGTGAGAGCTCTTGTTATCGAAATATACGTTGGGTTGAAGACACTCTTATTAAAGATGGGCAATTCTCATTGCCTGGGCGTAAAGCGTTACTTAAAAGTGACGTTGAATATGAAGTTGTGCTTATTGATGCAACGGAAAGTCCCATTGAACGCCCCAAAAAAACCAAAAACACTTTTACTCAGGCAAAAAGAAAAGACATACGCTAAAGACACAAA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCGTGCGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //