Array 1 43306-44433 **** Predicted by CRISPRDetect 2.4 *** >NZ_QOCU01000008.1 Lactobacillus bombicola strain BI-4G BI-4G_S78_L001_R1_001_78__paired__contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 43306 29 93.1 32 ...............NN............ ATATCGTTTTCTTCACAATATTTTTTTAAAAG 43367 29 100.0 32 ............................. ACATCCAAGATGACATCATTAATAAATATGGG 43428 29 100.0 32 ............................. AGTGTTAGTTATAGGCGGATTAACAGGGAACT 43489 29 96.6 32 ............................C TCTGCACTCAATAAAAGCGGTATGGTTCAAAA 43550 29 100.0 32 ............................. ACGACCGTACAAAATGGTATCGTGTTGACTAT 43611 29 96.6 32 ............................C AAATGGCAGGAATTAATGTTTTAGGCTTATCT 43672 29 100.0 32 ............................. ATTAGCTATATCCCGTTCAATCAATCCAGCTA 43733 29 100.0 32 ............................. AAAATCGTGACGAAATCGAATTTTGTAGGTGT 43794 29 100.0 32 ............................. AACAATCCTCCATTAGCTACTTCACTTAATTC 43855 29 100.0 33 ............................. TTTTGTTCTCAAAATCAGATATATTGCCAGTTA 43917 29 100.0 32 ............................. CTACCCAAGTCAGCAATTCCAGCACCGTTTAG 43978 29 100.0 32 ............................. CTACCCAAGTCAGCAATTCCAGCACCGTTTAG 44039 29 96.6 32 ............................C AGGTAAATCTGCCTGTTTAAGCACTTCAATAA 44100 29 100.0 32 ............................. AACACGGCATATACCGTGTCAAAAATTAGTTT 44161 29 96.6 32 ............................C ATCTGCTTGGTATGCCAAAAAAAGATGCAAAG 44222 29 100.0 32 ............................. TACCAAAGATAACTCTACACAATTGTTATTTT 44283 29 100.0 32 ............................. GCGTCTTTTCCAACAGCCACATGATTCCCGTT 44344 29 100.0 32 ............................. ACAAAATACGTAAAAAAATTAAAATAAAAAAA 44405 29 86.2 0 .............A......A..A....C | ========== ====== ====== ====== ============================= ================================= ================== 19 29 98.2 32 GTGTTCCCCACGTGTGTGGGGGTGATCCT # Left flank : GATAAAAATCAAATTATTTCTATTGGAGCAGTTAAAAAAATTAATGATAAAAAGTATGATAGTTTTTATAGATTAATTAAAGTTGATACTGCAGTGCCAAAGACGATAACTGAATTAACCGGCATAACATTAGAATTATTGAAAAAAGAGGGGGTTACTTTAGATAGAGCTCTTAGAGAACTAACTGAGTTTATTAGTTCTGCCACGATTATTGGCTATAATTTACAGTTTGATTTATCCTTTCTCATGTCCGGCTATAGATTTGTAAATTTAAAAGAACCGGATAATGAAACTTTAGATTTATTACCTGTAGTTAAAAAAGCGGAAAAATTTATTGATAATTATCGTTTGGCAACTATTTTAGATTTTTATAATATTAAGAATTCCAAGCCACATAATGCACTATCTGATGCTAAGGCTACGTTGCAGTTGTTATACAAACTAATGGAAAATGGCAATATCAAAGTTTAAAAATAGGGGTATAACAAGGATCTTTTACT # Right flank : CGACAATGGTCAAAACGTATTGATGAACTTAGTGGTGTTCAAAGTGACTTGAATCGGGTTTTTGTTGGTAAAAATGTTGCCTAATATGCTCTACAACTTTAGATTATGTGCTAGATTTGGTGGTCTAATTCTTGGCTAACGATTTTTTGATTACTTAATTCAACTGCTAATTCAACTCTTTTATTTTTTTGTTGCAGAGTTAAGGTTTGAATTTGGTCAACGTCACGATAGCCTGCTGGTATTCGTGGACGTTTTTTAATTGATTGGTTAAGCCTGGTTCGCGTTCAATGCCGTATTTATGCGCTAGTTCAGTTAGGGCAAGAGAGGGCGTGACTTAACGGTTACTGCCCGCTGTGCACCTCTTAAATGCGCCACAGGGGGCGAAACAGAAAAAGCTAGCACCATTTCTGCTTAATTCAATTTTGGCAAAATTGTATAAGGGTCAAAATTTCATGATAAAAAATAAGCAGGAGGGACTAATGCTTATTTTTATCGTCCGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGTGTGGGGGTGATCCT # Alternate repeat : GTGTTCCCCACGTGTGTGGGGGTGATCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //