Array 1 271017-271403 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068055.1 Sutterella wadsworthensis strain FDAARGOS_1159 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 271017 36 97.2 34 ..........A......................... AGGTCGACTGGCTCCAGTACGATCCGGCACTTTT 271087 36 97.2 32 ..........A......................... GCAGCAGGGATCGAGGACGCTAGGCGTTTTCA 271155 36 100.0 35 .................................... CGAGCTGCAAGAAGCAGTTCCTGATCACACACATA 271226 36 97.2 34 ....................G............... AATCTTTTGGGTTGTCACCTGAGCGAATTCTTCT 271296 36 100.0 36 .................................... GGGTGAAGACCCAGTCATTGCCGACACAAGTAATCG 271368 36 91.7 0 ..........AA..T..................... | ========== ====== ====== ====== ==================================== ==================================== ================== 6 36 97.2 34 GTCGAAAGACTGCCCTGATTAGAAAGGGATTGCGAC # Left flank : GTTGCGCACCTATGTGCGGGGAGGAGATTTGATGCACTTCATCATTGCCTACGACGTCACCAACCCGTCACGTCTTCAACGTCTTCACAAGGCTCTCTGCGAGTATGCGTTGCCCATACAGAAAAGTGTCTTTCTGCTCATGGGAAGTGAAGCGCAGTTTGCAAAGTGCCGTCAGAAGGCCGAACAGATCATCGACTCGTCAAAGGACGATCTTCGGTTCTACGCCCTCCCGGAACGAGGCATCAAAATTGCTCTGGGGCAGGCACCGCTTCCCGATGGCATCTATCTATCCGAGTTTCCGGAGCTCTCTCAGAGCTGCTGAAGCTGAGAACTCCCAAGCTGGATCTGAAAGGATTTCATGCGTAAAATTGGACAGTTCATTGACAGCGGCTTGCTGAAAATATTTGATATCGATCAAATGCACCAAAATTCACTTTTTTGCCCTTATTGGACATTGTCGCATTTCATTGATAAAAATGAAATATTTTTGGAAAAGTAGA # Right flank : CCCATCGTACTGATGTAGTTAGTGATGGCTTCTTCAATGTCTTTTGCTTACTCGTCACTAAAAAATAATTTCGCTAAAGAAGCACACGACAGTTTAACAAGCATACAGACATTCATCTCTAACAAGTAATTGACCGATATTCACCTATACTCGAAGTAAATCTATATGGATGGCATGAAAGAACACTTGGAACAGCTATTGATAGTCTAGGATATACGAAAGCTAACCAACAGCTCTCTGCCATAGTTTTTTTGAAGAAAGGCGACGATGCCCTTGCAAAGATTAGAGTACAGGCACAAGCTCCTACTTCCAATATTGTTGGAGCCATCTATAAAGGATCTAAGCTAATTACTGATGTAGCAGCAATGGGAATACTGGATACCTTACAAGAAAAAAATGATTGAAGAATAATGCACAAAGCCCTTCTCCCTCGAGGGCTTTTACGATACAAACTGGATGTTTATTTGATTTGCTTATATCGAGAGATGACCATATAAAAA # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAGACTGCCCTGATTAGAAAGGGATTGCGAC # Alternate repeat : GTCGAAAGACAGCCCTGATTAGAAAGGGATTGCGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 1842873-1844593 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068055.1 Sutterella wadsworthensis strain FDAARGOS_1159 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1842873 37 100.0 37 ..................................... AAATGAGAACGAAGAATTTCTGTATATCGCGTACCAC 1842947 37 100.0 36 ..................................... TTCATGGATAACCTTTACCTAGAGACTTTTTTCTTC 1843020 37 100.0 35 ..................................... TCGTAGTGCTCAAGTTTCAAAGGTCCTGTGATTTT 1843092 37 100.0 36 ..................................... CTGGGCGCAGACGATCCGACGACGAAGCGCTTTATC 1843165 37 100.0 37 ..................................... ATAGTCCCTTTCATGGACAATTTATATTTGGAGACTT 1843239 37 100.0 37 ..................................... ACGCAGATTGCTGCTGCAACTGCTTTCGTATCTACGA 1843313 37 100.0 35 ..................................... ACAAGGAACGATCTTCGTTGCTCATGAGAATATTG 1843385 37 100.0 34 ..................................... CAGCTGCTTCTGATTTGCCGGCGTTCGTTTCGGA 1843456 37 100.0 38 ..................................... TGCCTGTACGGGATTCGTATATTGACGTCAGCATTCTG 1843531 37 100.0 34 ..................................... GCTCTCTGGGTGTCAGCCAATACTCGACGCGGCT 1843602 37 100.0 37 ..................................... ACGGTTGAAGAAAGCGGCACGACGGAAGCACCGATTT 1843676 37 100.0 39 ..................................... TGGGGGGATGAAGAACGCCCTGTCGCCTATATCTCTAAA 1843752 37 100.0 34 ..................................... AGATCGCAGAGCCAGAACTAAGCACTACGTTTAC 1843823 37 100.0 37 ..................................... TAAGCTTTTGCAGGAATTCGAGGCGCTCGCCGCCATT 1843897 37 100.0 34 ..................................... GCCACATATTCATACACGGCCTCGACGCTGAATA 1843968 37 100.0 36 ..................................... CAGTGTGGCAACCGCTCTTGATGATGCTGGGCGCGG 1844041 37 100.0 36 ..................................... TTGCTCAGGGATGGGGAAACATCCAGTACGGCATCC 1844114 37 100.0 38 ..................................... ACGTACGCGCCGGTCTCAGTGATGCGGAGTTCGGCTTC 1844189 37 100.0 37 ..................................... AATCGGCGCGGCTTACTGGGCTGCAGTCGGCCCCGAA 1844263 37 100.0 37 ..................................... TTTGTTTTGCAAACGATCGGAAGAAAACCCCTGCTGG 1844337 37 100.0 36 ..................................... CAAAGCGTCCTGCACGGTGCAGGCACAATACGGTAT 1844410 37 100.0 37 ..................................... TACAGACCCCAACGGCCAACGCAAACCCCGCGACGAA 1844484 37 100.0 36 ..................................... GGAGTGCTCGGTGAATCACTTCGCAGGAATGTGTCT 1844557 37 78.4 0 ..GA...............A..A..C.A.G......A | ========== ====== ====== ====== ===================================== ======================================= ================== 24 37 99.1 36 GCAGAGATCATAACGCTACGAGCTATAGCACTGAAAC # Left flank : GGGTTTTGTGCTTTATGGCCAGAAAGGTCATACCCTGAAGGTTATAGTAGACATCAAATTACGAGCTGAAGTTCTTACTGTGGCAAATCTAATAAGAGAAGCCTGTAAAAAGGCTATCGTGCCTCATACAGCAGCTACGGAATCGCAATGCGCGCAATGTGAGTATCAAAATTTCTGTGCAGATCGATTCTAAGAAGTGAATACTTACTTCTAAGTAAGTAAATGAAAACCTCATTCTTTGGCCTAATCAAAGAATGAGGTTTTATATCAAAATATCCGGATATCTACTACTAGATAGTGGCCGGATTCAATCTTAGCTTTAGGGGATTTCAGCTCACCCGAAGGTGATTTCCTATAGCTCATAGCATTATGATCTCTAATCAGTATCTTACGATGTATTTTCGAAAATTACAAGGTTTTTTATCAATCTGAGTATTTTCGAAGTATGGCACTCTGCAGATAGTTGCAAAAACCTTATAAATCAATGTGTAAGTTAGGGG # Right flank : ACACAGATTCAACAAATATCACTATTCAAGGCATTGCAGCAATTTCACCTTAAAAGCATGCGAGCGCTCTAGTGTTATAGACACACTCCACTGAAGAAGCCGCGTAGCAACGTCTACGCCAAACCCCCTACAATAGATGCCTCATGTTGATTCTGGAGGCTCCGTCATGGGCAAGCTCTATATGGGTTTCGATGCTGGCACGCAAAGCGTGAAGGTTGCTGTTTACGATGAACAATTTCGCCTGGTCACGAGCCGATCACTGCCCACATCACTCACCTATCCGCAGCCGGGGTGGGTAGAAATGGACGTCAACACCTATCTTGACAACTGCGTGGTTTGTATGGCTGAAACCACGAGTGAACTGCGGCGTTTGGGGTTCGATCCTAAAGACGTCAGTGCCATTATGGGTGACGGCATCATCTGCGGCATTGTCGGGATCGATGAAAACGCGGATCCGGTAACGCCTTACATCAACTACCTCGACAGCCGCACCATGGCTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGAGATCATAACGCTACGAGCTATAGCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //