Array 1 414376-414609 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNPT01000002.1 Saccharibacter sp. 3.A.1 scaffold_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 414376 36 100.0 30 .................................... CGGGAACTGGCGCCGCATCCTTCCATTTCT 414442 36 100.0 30 .................................... TGCCGGCCCGCAATGGGCAAGCCGGGACAG 414508 36 100.0 30 .................................... GCATGAACAGGAGCTGAGCTGATGACGGTC 414574 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 AGCCTACCATAGGCAAATCGGTAGGGAAACCACGGC # Left flank : ACCATGACTATTCTTGCAGCGACTGAAATTGTTGCCTCTAACCTGGTTAAAGCCCTTGAACATAACAGTGCTGCCTTACTGCGCCTGCCTGTCTGCATCGCTGGGGGTAGCTCATGAAAGCAGAGGAGACCCGATTCTTGTGGCTAATAATCTTTTTCGACCTCCCCGTCCGCACCAAAATTCAAAGGCGGCAGGCAGCGCAGTTTCGTAATTTCCTACGTGATGATGGATTCATCATGCTACAATATTCTGTCTATGTTCGTGTCGGACGGGGACAAGACAGTCTCGATAAACATTTACGCCGGGTTCGGACCGCCCTCCCTAAAGAAGGAAGCGTCCGAGCTTTGCAAGTAACGGACAAACAGTATGGAAGGATGGAGATTATGCTCGGCCTTGCCAAAAAAACCGAAGGAATAGGCACGAAACAGATGGTGTTGCTATGATTTTCGATCGTAAAAACAATAAAAAATCATGCAACATCAATCTGTTACGCAAGAGCT # Right flank : CCTTCCGCCGTGAGGCCCTTAGAGCAATCGAACCTACCATAGGCGAATCGCTAACCATCCAAGCGATTTGGAGCAATGTATTTTGTTTGGGAGTATTCGTGTGTATGGATGCGGGGGTAGGATTTGAACCTACGACCTTCAGGTTATGAGCCTGACGAGCTACCGGGCTGCTCCACCCCGCGTTGGTGGGTGGTTTTTATGGGGGTGGGTGAGCGAGGGGACCTGGCGGCGACCGACTTTTCCGCTCCTTAAGGAGCAGTATCATAGGCGCTGGAGGCTTTAACGGCCGAGTTCGGGATGGGATCGGGTATGGATCCTCCGCCATGGCCACCAGGTCTTCCCGCTCACCCATGTGGGTGTTTGGGGGTGTTTTGGTTGGTG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCCTACCATAGGCAAATCGGTAGGGAAACCACGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 76346-74730 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNPT01000004.1 Saccharibacter sp. 3.A.1 scaffold_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 76345 29 100.0 32 ............................. CCGTGGCGCATTATCGGCAACATCTCAACGGA 76284 29 100.0 32 ............................. TCGTCCCTGCCGTGAATGTGTCTGGAATCTTC 76223 29 100.0 32 ............................. AAATTCCGTTCTGATGGAGCGCACAATGAACA 76162 29 100.0 32 ............................. GCAGGGGTCATTCCCATAGGGTAACTCCCCGC 76101 29 100.0 32 ............................. TGGTCCGTAGACCTGATCGCCGACGTGCTGGC 76040 29 100.0 32 ............................. CCCGGGGACGTTTGAGCAGATTCTGTGCGTTG 75979 29 100.0 32 ............................. CCGGGTTGACTGAACCCGGCCATCCCATCCCT 75918 29 100.0 32 ............................. TCGTGGTGACGGACCCGTCATCTTCCGTGATC 75857 29 100.0 32 ............................. GCCTGCCTTTCGCACTGGCAGAGACGCTGACC 75796 29 100.0 32 ............................. GGCTGGAAATAAAGAAGGACATTCGGGAGATC 75735 29 100.0 32 ............................. TGGAAGGGGGCATCCATGATGTGCTGGCTGCT 75674 29 100.0 32 ............................. ATGATCGTCTGCATTCCTGATGATATCTCTGA 75613 29 100.0 32 ............................. CGGGGTCCGCTGTCGGATTGCCTCCAACCGGG 75552 29 100.0 32 ............................. CACCCGGCTGGCCGCAGAGGATTACGCCAATG 75491 29 100.0 32 ............................. GCACACCCCTTACTACTCAGTTTTTCAACCCA 75430 29 100.0 32 ............................. CCAGCGGACACAGAGGTTTACTTCCAGCATGA 75369 29 100.0 32 ............................. ATATTTTTGTTAAGACTTTTGCAACCGAACGA 75308 29 100.0 32 ............................. TCCCGGGTTCCCGGGAATGGCCGATCATGGCC 75247 29 100.0 32 ............................. ATCGAGGATGCCAACAACCACTGGATCGACGC 75186 29 100.0 32 ............................. ATCGTCATTGACACGTCCCTGCGCAATTTCAC 75125 29 96.6 32 ............................T ATCCAACGGTCTTCAATCAGGTTCATTATATC 75064 29 100.0 32 ............................. AGTGGGTTACCTATATGAAGGCGCTCATTTCG 75003 29 100.0 32 ............................. TGCAGGGTGTCCTGTCCGGCACGTACGGAATG 74942 29 100.0 32 ............................. CACCGCCGCTACGTCTCTGATGGCGAGCGAGG 74881 29 96.6 32 .......T..................... ATCTGGTACAGGCCGACAGCAACGCCGCCGCC 74820 29 100.0 32 ............................. GATCATCATCACCGAGCTCGACGCCTGCGACC 74759 29 93.1 0 ......................CA..... | T [74732] ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.5 32 CTGTTCCCCGCCTACGCGGGGATGAACCG # Left flank : TCGTGTACTGCATGGCCCTCCTGCTGGAGCTGCTGCGGGGCAGGAATGAAAAAGGCGAGAAAATTGCGCTTCAGGAGCCGTTCCTGACGGCAGAACAGTTGAATATTGCTGCCTCTGACGATTTTGAGGCTTCCATCGGTCTGCCTGCTTTCGACAGCTGGCGTGATCTTCTGACCCCAGAGATTAAGCAGGAGATTGTGCGTGATCGGGAGCTGATCCGTCAGAAGGGTGTTCTGGCCAGCCTGCCCGTGTGATGAGGCGATGAGCCGTTGAAAATTGATTGTGTGTAGAGAAAGGGAGGCTCCGGCCTCCCTTTTTCATGTTTGCTGTCAATCTTGTGGATAAAATTTGCTGGAGTGGTTTTTGGCTGTTCAGCGTCTCAACTTTCTTCTGTAAGGGCCGGAGAGGACTTGCCTCGGCGAGGTCATTAAAATTATATTTAATTCGGTAAGTTCTTTGACAATTAAAAAAGACTTATAATACAAATGGTTACAGGAAGT # Right flank : GTGCCAGACCGCCATCACTGGCCTGTACCGAACTGTTCGCCGGTGGGTCATGGGATGGTTGGTGGCATATGTGGTCGCCAGAGCCATTCCAGAGCTTCGGGAAGGGTCTGTTCGATGGTGGGGCCATCCACATGCCGGGCATTGCGGGCAAAGACAAATTGGTAATCATAGCCCTTGTCGGCCAGCACGCGGGCCATGTTTTCCCCGGCCAGCACCCAGTCATGCATGCCATCAGGCATGGACGGAACGGGGTAGAACAGGTCCTGGTCGCCTACTTCGTACCAGATGTGCAGCGGGGCCAGTGGTGCCGCCGGGATGAGCGCCGCACCGGGATGGGGGGGTACGGCTTCCGGTGTTCCGGCCCATGGGGAGTGAAGCTGCCATCCCCCGCCGGGCAGGGCGGGGTCATGCGGCCATTGCTGGTTGACAAGTGAAGGAGAGTAGGCCAGCACCCGGTGATAGAGGTTGGGCCGGAACCAGGCCATGGCAAAGGCCACTGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCTACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCCTACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 26186-27251 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNPT01000005.1 Saccharibacter sp. 3.A.1 scaffold_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 26186 29 100.0 32 ............................. TGATGCGCCGTTTAAATGCCGGGGTCCCACGC 26247 29 100.0 32 ............................. TTGGCGGTGATGGAAAGAATACACGCCCTCGT 26308 29 100.0 32 ............................. TTCTCTGCACCATATGTTACGTTGTTCCTCAT 26369 29 100.0 32 ............................. TTCTCTGCACCATATGTTACGTTGTTCCTCAT 26430 29 100.0 32 ............................. AGAGCCTGATATTCCCCGGCGGGAACGTGCAG 26491 29 100.0 32 ............................. ACCATCTTCGGCTTTGAGGCGGTTGATTTTTT 26552 29 100.0 32 ............................. GCGGACCCGGCGTACCATCGTGCCGAAGGGCG 26613 29 100.0 32 ............................. TCGGCCTCGATGAGCCGGGCCGGTCCCACGGC 26674 29 100.0 32 ............................. GAAGTCCCGCTCTGGTAACGCTGGGTGCTGTT 26735 29 100.0 32 ............................. TTGGTCTGCATGATCCCTCTGTTACTAGTTTG 26796 29 100.0 32 ............................. GATGAGGGGCGTGAATGATGGCCAGCGCACTT 26857 29 100.0 32 ............................. TAGCGGTTGTGCCCCGCACGTTCATGACGATG 26918 29 100.0 32 ............................. AGGGGGTGGGTTTGCCGTGGAGGCGGTTACGA 26979 29 100.0 32 ............................. TCAGGCGCAGGACTGCCGCCGCCATGCCCGCA 27040 29 100.0 32 ............................. GTCGAGCGTGCCCGCCATATCCCTGCATCCGA 27101 29 100.0 32 ............................. ACACGCCGACCTACCACTGGAACCGTGAGAGT 27162 29 100.0 32 ............................. AATGTACATTACTAGTCCCCCTGTTCTCTCAA 27223 28 86.2 0 .....................-.TC...A | C [27246] ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.2 32 CTGTTCCCCGCCCATGCGGGGATGAACCG # Left flank : CTGGAGAGAATCATTCCGACCATTGAGCAGGTTCTTTCGGCTGGCGGTCTGCCTCGCCCCGAGCCCCCACCGGAGGCCGTGCCCGTCGCTTTTGAAGATGAAACCTTTGGCGATCCGGGGCACCGTTGATGCTGGTTGTGGTGGTCACCAATGCGCCACCCCGCCTGCGTGGCCGTCTGGCAGCATGGCTGGTGGAAATACGGGCTGGGGTCTATGTGGGCAGCTACTCCAGACGGACAAGGGAGATGATCTGGGAGCAGGTACTGCTTGGCCTTGGGCCTGAGGGTGATGCTGTCATGGTTTGGCATGTTCCCAACGATCAGGGATATGAGTTCTGTACGGCTGGTCACAATCGCCGGATGCCGGTTGATTTCGATGGATTGAAACTGGTTGCTTTTCGACCGGAATAAAGCGAAGGAGTGAGGTATTAAATTCTGGTTTAAGTTGGTACGGTCTTTGACAATAAAAAAAGTCATGTCTTACAGTACGTTGCAGGAAGT # Right flank : ATTATTGAATGTCTTGATGAAGGCTGTGGCTTTACCTATTATCGGTGGTGCAGCGTATGGTGATCAGGCGATATTCTGCCGGCCTGGGCCGCCCGTTAGGGTAGTTGCGTTATTGTGGGGTTTGCGGCAGGCCCCACCCATACGCTGTCTTGGTTTTTTGTGTTCGGGAAGCTTCGCCCGGTGATGCGGTGGCGGGGCCTGCAATGAACCCCGCAAAGCGCCACGTGGCGGGTTGCCACAGCTACGGCCTGCAGATTGTCACCGTGTCGCACCGCATCGGCAGCAGTTGATGTTAATGGGAACGTGACGTCAAGAGCTGTTATCCTGTATGGCAAGACAGATTTCCTGTAGTTTTTCTGCTTTGTTTCACCATCGATATGAGAGATCACCAAACAGGGCACGGCCAGGAGCGTAGGAGCAGTTGGTCGTGCTGGTACATACGGAAACATATTTCGAGTTGGCAATGTTTGTGCCATTCAGCTGGAGGTGCCATCTCCGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCCATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCCCATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.00,-12.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //