Array 1 19771-21750 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAHL01000007.1 Lactobacillus acidophilus strain DS20_1 DS20_1_7_length_86407_cov_108.517119, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 19771 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 19832 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 19893 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 19954 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 20015 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 20076 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 20137 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 20198 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 20259 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 20320 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 20381 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 20442 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 20503 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 20564 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 20625 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 20686 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 20748 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 20809 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 20870 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 20931 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 20992 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 21053 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 21114 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 21175 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 21236 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 21297 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21358 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 21419 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 21480 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 21541 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 21602 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 21663 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 21724 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //