Array 1 123163-121081 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJKQ01000017.1 Streptococcus oralis SK610 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 123162 36 100.0 30 .................................... TCATTGATGGCGCAAGTGGTCAAAAGATCC 123096 36 100.0 30 .................................... AAGTTACTAGCATTAGATAGCAAGTAAGCA 123030 36 100.0 30 .................................... TGACGAACATGATGACCTTTGGATTCGTGT 122964 36 100.0 30 .................................... GTTGGAATATGACGCTGAAAAGGAAGGCCT 122898 36 100.0 30 .................................... GCCACAAGATGCTGATTGCTGGTCCGTCCA 122832 36 100.0 30 .................................... GTATGTTCCATACTTGATAACCGCTAGGAA 122766 36 100.0 30 .................................... CGCTTGAAGATAGTTCTTGCTCCTGCTGCT 122700 36 100.0 30 .................................... TATAATTACCAAAGACGAAGGGGAGACTTT 122634 36 100.0 30 .................................... ATCCTTGTCTTGTGGTTTATCTGATGGTGT 122568 36 100.0 30 .................................... TTCAGATTGCTGAGGACGTAGTTGCTTGGT 122502 36 100.0 30 .................................... TGCTAAATAGCGAGAATGACACTGTCACTG 122436 36 100.0 30 .................................... TAAAGGCGTCTTAGTAGTCAGTGAGATTGT 122370 36 100.0 30 .................................... CCGTACACGCTGTAATAATCGTCGTTAGGA 122304 36 100.0 30 .................................... CCCTCACCAACAATTTGAGCGTTTCCTTCA 122238 36 100.0 30 .................................... AAGATCATCAAAAGGCTGTCAGAATTGACA 122172 36 100.0 30 .................................... AATTGGTTTACAAATGGACTAAATACCCTT 122106 36 100.0 30 .................................... TCTTGAACCTAAAATCATTCAGCGTGGCCA 122040 36 100.0 30 .................................... GCGTGACATCTTTGTCAGTCAAGATATTCT 121974 36 100.0 30 .................................... ACAGTGTTTGTTGATGAATGTTAAGCTTAT 121908 36 100.0 30 .................................... TTCAAACAGTTCATTCGATCGAAATCATTT 121842 36 100.0 30 .................................... AATTGGTTTACAAATGGACTAAATACCCTT 121776 36 100.0 30 .................................... TCTTGAACCTAAAATCATTCAGCGTGGCCA 121710 36 100.0 30 .................................... CTCCTTTGATCACTGATTCCATTGCTCCCG 121644 36 100.0 30 .................................... GATGGAGTCATCAACTTTACGACCTAATAC 121578 36 100.0 30 .................................... CGTCCATAATCATTAATGTATGAATTGGTT 121512 36 100.0 30 .................................... TGCCCGTCGTACTGAGTCTTCATTGTTTGT 121446 36 100.0 30 .................................... TATTGCTCACCTTTATATGACGCAACATCA 121380 36 100.0 30 .................................... ACCCTCCAGCTCCACAACATCCAGTTATTA 121314 36 100.0 30 .................................... GGTGGGGCTATGATACTCAATCATGCCCCG 121248 36 100.0 30 .................................... TATTTCAGACAGTACTAAACCAATTTGAAG 121182 36 100.0 30 .................................... TCTTTTCTATACCCTATTTTACACCATGAA 121116 36 91.7 0 .................................TCT | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.7 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAGCCCGAAGTCAAGTCCATGATTGAAAAGTTGGTTGCTACGATTACAGAATTGCTGGCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATTACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACCCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTCATCAATGCATCCGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATAGAGTATATCCAACTCAATCAACTAAGTGTTTTATTTGTCGAACCTCGTAAAGTCTATGATTTTCCCCAGTATGTAATGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGGATAACAATTGGAACCTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : ACATAAAGAGCTACTCATTTTTTGAGTAGCTTTTTAACTATTCCATCCCTTACACATAGCTCATTCCTTTGTAGAAAAGGAAAATGGCAAGTGCGACAAAAAGTAGGGTTGCTCCGATTCGCTGGCTGGTACTATACATCCTTTTATCCCATTTGACTGGAAAAATGACTGCTAGAAAGGCACCGCCTACTGCGCCACCAATATGCCCTGCTAGGCTGATTCCTGGAATCAGAATACTTCCAATGATATTTATCACGAAAAGCGTCAGGTAGGATTGCCCTAACTGCTGGATATAGGGGCTGCGAGTCGCATAGCGCAAAACGATAATCGAAGCAAATAATCCATAGAGAGAAGTGGAGGCACCTGCTGCTAGGACTTTCGGTGTGAAAGCAAAAACAAAGAGATTGCCCATCATTCCTGATAAGAGATAAAGAAGGAAAAATTGCTTAGAGCCGAAAATCTCCTCCACCTGTTGTCCAAGAAAGTAGAGTGAAATCATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //