Array 1 21303-22862 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPDL01000264.1 Dickeya dadantii strain CZ1501 1288, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 21303 32 100.0 33 ................................ TGCTCGACTTGGTCACGGAGTTGAGCAAAATTG 21368 32 100.0 33 ................................ CACCACTGGCTCTGTACTTTCTGAGGCTGAGCA 21433 32 100.0 34 ................................ TCGATACGTTCAAGATATCCACCTTTTTAAATCG 21499 32 100.0 33 ................................ GTAGCAGACGCCATGACCTGTGTTGGAGAGTAC 21564 32 100.0 33 ................................ AATCAAATCCCAAAAGCTGAGCTGTTGGCTGTT 21629 32 100.0 34 ................................ TAATCAGCGGGCATTATGATGGTGCTTAAACAAA 21695 32 100.0 33 ................................ CCAGCGTCTGGGTGTCGATAGTGTAGCCACCGT 21760 32 100.0 35 ................................ TCACTAAATTTGCCCCGTCTCATACTTATGTCATT 21827 32 100.0 35 ................................ ATCAACCTTGGTAACGACGGGAAGGGGTCTTACAA 21894 32 100.0 35 ................................ AATTGGAGACAATGCAAAAACCCCCTGAAACGTTA 21961 32 100.0 33 ................................ TGTCATTATTGTTACCCCCGGTTTCATATAGCC 22026 32 100.0 34 ................................ CAATAAACCAGCCATCACCAGCAGGACAATCCGG 22092 32 100.0 34 ................................ TGATAATTGCGCAAAATCCGGTAGTCGATAACGT 22158 32 100.0 34 ................................ CACTGATCTTGTTCGCTGGCGTTACCCTGAAAGC 22224 32 100.0 32 ................................ CTTGACCCGTCCTTGTGGTACTTGTATACAAA CGCGTGG [22248] 22295 32 93.8 33 ............G....T.............. TTGCCACCGAGGTTGACACCGTATTCGCCCCCG 22360 32 93.8 34 ............GT.................. GGGTCGTGGTTTATGGCGATATCAACGCTACGAC GTGGC [22380] 22431 32 96.9 34 ............G................... AGCAAATACAGTCAGCAGTAATTATACTGACACG 22497 32 87.5 36 ........C...G.....T....A........ ATCATGTTGTAGCCGGCTTTGGCCAGGTCATGGGTT 22565 32 100.0 33 ................................ GTCGTTGCTCCTTTGCCCTTCGCCGCGAAAGGC 22630 32 93.8 33 ...........TG................... ATGCCCGTATAACGATTCACACCGGCCCCCCGG 22695 32 100.0 34 ................................ CACACCAGCGATCCGCGCTGTTTGGCTTTATCGA 22761 32 90.6 34 ..A.......T.G................... TGCCAGACATGCCAGATTGCTGCATCTGTCTCCT 22827 32 87.5 0 ............G..........C.....T.T | ACA,C [22848,22852] ========== ====== ====== ====== ================================ ==================================== ================== 24 32 97.7 34 GTCGCGCCTCACACAGGCGCGTGGATTGAAAC # Left flank : AGCATATCAACCGGAGAAGCCGCTGTATGATGGTACTCATCACTTACGATGTATCGCTGGAAGATGCCAACGGCCCCCGCCGCCTGCGACAACTGGCGAAAATCTGCCTGGACTACGGTGTGCGGGTGCAATACTCGGTATTCGAGTGCGACGTTGACGCTGCGCAATGGGTGGTGTTGCGCCAGAAGCTGCTTACCACCTATGACGAACGTGTCGACAGCCTGCGCTTTTATCGCCTTGGCAAGGGCTGGCGTGATAAAGTTGAGCACCACGGCGCCAAACCGGCGCTGGATATCTTTGGCGATACGCTTATCGTGTAACGCTGCGCCAACCCCCGGTACTCATCATTTTCCCGGCCGGTTGGCGCAATCTCATCCAATTGAATGATAAACAGTTTATTTCTGTGCCTCACCGTTGCGCCCTCAGCTTCCTCTCGTAGACATGACGTTGGCGTTCTTTTAGCGCTGACGCTATGCTACAAGCGCCTTGCCCGCAAGGCA # Right flank : TTTGATTCGCCGGTTAACGCGGCGATGGCGGGTCCGCTTCAAACAGCGGCAACGGCTTGCCGATGATGTAGCGCTGGCGCAGGTGCGCGGACAAGGCATCCATCAGCATCACCACCACCACCAGAATCAGGGTGATGAACATCACCACGTCCCAGTTCCACAGCCGCATGTTTTCGGCGTACACCAGCCCGACGCCGCCGGCGCCGACAAACCCCAGCACCGCCGCCGATCGCACGTTGGACTCCATCTGGTACAGGCTTAGCGCCAGAAAGGTAGGAAACGACTGGGTGAAGATGCCGAAACGGTGTTTTTGCAGGCTGTTGGCGCCGACCGCGCCCAGTCCGCGGCTGGGCGATCGCTCGACCGCCTCGTGCCCTTCCGCGTACAGCTTGCCGAGCAGACCGGTGTCCTGCATCAGGATCGCCAGCGCGCCGGACAGCGGCCCCATGCCCACCGCCCGCACGAAAATCAGCCCCCAGATCGCCATGTCGATGCCGCGC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCACACAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-35] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //