Array 1 32415-31907 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NXDH01000003.1 Moraxella catarrhalis strain 2019228G 2019228G_contig_3, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     32414	    28	 100.0	    32	............................	TTGGGTGAGCTGGAAAAGAAACAAGCGAGCCA	
     32354	    28	 100.0	    32	............................	TACATACAAAGGTTTGTTACTGGTAATTCTGT	
     32294	    28	 100.0	    32	............................	TTCATATTGCAAGATTTCAATAGTATAATCTT	
     32234	    28	 100.0	    32	............................	ACGCTCCAGCTTGATCTTATCAATGCGACTTT	
     32174	    28	 100.0	    32	............................	GATGTCGTGCCAGATACCCAGTCTGTCCAATC	
     32114	    28	 100.0	    32	............................	AGTATTAATACACTTAATCAAAGCTTAACAAC	
     32054	    28	 100.0	    32	............................	TTAAACCCCAAGCTTTGAATGATAGAACCATG	
     31994	    28	 100.0	    32	............................	AAGCGATTAATCCGCTCACCAATTGTTCTGTT	
     31934	    28	  96.4	     0	..........A.................	|                               	
==========	======	======	======	============================	================================	==================
         9	    28	  99.6	    32	CTTCACGACCGCACAGGTCGCTTAGAAA	                                	       

# Left flank :   TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTACAAGATACGCCCATCTTTTTGCATGACTCAGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTTAGGTCGGCAGGTTTGAGCGTACTCATGATGACACAAATCCATGTTTAATAATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT
# Right flank :  TTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGTGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACA

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTCACGACCGCACAGGTCGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.10,-7.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//