Array 1 1203141-1205430 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056219.1 Citrobacter sp. RHBSTW-00976 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1203141 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 1203202 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 1203263 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 1203324 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 1203385 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 1203446 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 1203507 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 1203568 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 1203629 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 1203690 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 1203751 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 1203812 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 1203873 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 1203934 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 1203996 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 1204057 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 1204118 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 1204179 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 1204240 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 1204301 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 1204362 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 1204423 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 1204484 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 1204545 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 1204606 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 1204667 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 1204728 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 1204789 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 1204851 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 1204912 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 1204973 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 1205034 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 1205095 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 1205156 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 1205219 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 1205280 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 1205341 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 1205402 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //