Array 1 121275-119856 **** Predicted by CRISPRDetect 2.4 *** >NZ_FBMR01000024.1 Campylobacter coli isolate SWAN372, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 121274 36 100.0 30 .................................... CTTGCAGGGTGAAGACTATCAGGCTCTAAG 121208 36 100.0 30 .................................... CTAATATTTTATACATTTGTGTTCCGCCTC 121142 36 100.0 30 .................................... TTTGTATTGAGAAAAGTATAATTTTTACTT 121076 36 100.0 30 .................................... AACTGAAAGTTGATTTGCTGAGCTATCAAT 121010 36 100.0 30 .................................... ATTTCACTGCATTTCGGGCATTTTGAGTAA 120944 36 100.0 30 .................................... TAACGCCATCGGCTTGCTGTGTTTCATCTC 120878 36 100.0 30 .................................... TATCCCCGCTCTAAGACGGGGCAACTTATC 120812 36 100.0 30 .................................... CAGTTAGTCCTACTGATAGAGCTTAAAACT 120746 36 100.0 29 .................................... AGCAAGCAGAAAAGACACCAGTAATAACT 120681 36 100.0 29 .................................... ATTAAAACACTGCTTGACAACCCTTACAA 120616 36 100.0 29 .................................... TTAAGCAAAACACTATGCAATTTATTAAT 120551 36 100.0 30 .................................... AGAAAACAAAACTACCCTATGAATGAAATT 120485 36 100.0 30 .................................... TTTATTTCCTTAAGTATGAGTTTTTTAAAG 120419 36 100.0 30 .................................... CCTATCGTGAATACACAAATAGCACCATTT 120353 36 100.0 30 .................................... TAAAAAGTCGTTAATATCTTCTGGATTTAA 120287 36 100.0 30 .................................... TACAATTGGGCTGAGGAAATGTATCTCGCC 120221 36 100.0 30 .................................... TCCAGCAACTATTGCTTGTGATCTTTCAAT 120155 36 100.0 30 .................................... AAAATTCAAACCGCCATGACTATCCTTAGC 120089 36 100.0 30 .................................... AAAGAGCTTGTTAAAAACGATATCTATAAT 120023 36 100.0 30 .................................... CAATTGTAAATCGTTAATTTTTGAGGTATT 119957 36 100.0 30 .................................... TTTGATATGCTACATACCCCAATAGTAGTT 119891 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : AAGACCATTACAAGCTTCTTTTATATCTAATTCACAAGCTTTTTCATAGTATTGTTTAGCTTTAGAATAATTACCTTGTTTATGTTGTTCTTTTCCAAGATCAAAATAATTATCATTTGAATAAACGCAAACAGGTATTAAAGTAAATACAAATATGAAATATTTCATTACCATCAATTTTCCTTTTAAAGCTATATTATTTGAAATTTTTATATTCTTTACAATCATATTCATCTCCTAATTCACAAGATTTTTCATAATTAATTCTTGCTGTATGGCAATCTCTTTCGATGTACTTACACTTCTTTAATAAAATAACCATCGTTCGAAAATACATTTGTTGTTAATAAAATTAAGAACTAATATATTTAATTTTATTTGTTGCCTTTTATAATTAATTGTTAATTATAGCATAAATTATAATTTACAATTGATAATATGTTATGTAAAAATTAAAGTTTGAAAAAATTTATTTTTTCAAATTCCAAAAGCGACATATT # Right flank : AGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTTGTTTTCTTTGTATATCTTGTCATTGCTGTATTTAAAATCTTGTGTTTTTTCATCATACTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGAAACTCCGCCTAAAAGTATTTGCATATTGTCAAATTGTTTTTCAGTTATGGTTAATACTCTTATATTGCCACAAGGGGGTAAAATTCTTTCTACGGATTTGATTGCTGTTTTAGCCGAAGTCATTCCTTTACAAATTTTAACATATACGCTAAATTGCATCATAAAAAAGCCAAGTTTTACAAGCGAAACTCTAAATTTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //