Array 1 55-1182 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQJX01000026.1 Aeromicrobium camelliae strain YS17T scaffold_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 55 29 100.0 32 ............................. TCCCAGGGCCGCGCCATCGACGCCGGCGTCGT 116 29 96.6 32 ............................G CCACCCGCTCGGCCCAGGAGATGCGCGAGCAG 177 29 100.0 32 ............................. CGTCGTGACGACGTGTTGTAGTACACGCGGGG 238 29 100.0 32 ............................. CGACGACGCTGCTGGTCGAGCTTCCGACGCAA 299 29 100.0 32 ............................. CTCGTTCCCGGACTCTCAGCGAAAGTCATTCC 360 29 100.0 32 ............................. GGACGTCAGTACCTCGATGACGGCAGCAACTT 421 29 100.0 32 ............................. AATTCCCACCATTGGAAGGCTGAGAACAATGA 482 29 96.6 32 ............................G GTATACAAGCCGGTCCGGTACATGGGCAGCGC 543 29 100.0 32 ............................. ACTGGCCGCACGTATGGCACGCCACTAACTAA 604 29 96.6 32 ............................G TTCGACGACGTCGGCAGGGTCGAACTCGCCGC 665 29 100.0 32 ............................. GTCGGCCAGGTGGGACAGGCTGGTCACACTGT 726 29 100.0 32 ............................. TACCCCGCCACGGTGGAGACTGTCAAATGCGA 787 29 100.0 32 ............................. ATCTGCGCCAGGGACGCCGACAACGCGAACAG 848 29 96.6 33 ............................G TCCGGGAAGGACTGTCGAGAGTCGCAGACCGAG 910 29 96.6 32 ............................G GTGTCAAGCCTAGCGACGTTCTGGCACGTGGC 971 29 100.0 32 ............................. TAGTCGCAGCACGCCTAGCTATCGGTGCGCAT 1032 29 96.6 32 ............................G CCGAACAGATCGCGGCCGACATCAACGCGGGC 1093 29 100.0 32 ............................. GTCGCGCGCTGAATAGCCGCGACCACGCCCCC 1154 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 19 29 98.9 32 GTGCTCCCCGCGTGAGCGGGGATGATCCC # Left flank : CCGCGTGAGCGGGGATGATCCGTCCTTTTCGGCGCGAGACAGCACCTCGTCCCAG # Right flank : CGGGGCAGTCGCCGTGCACGCCGAGAGTGTTCCCGGTGGTGTGACACGGGCTGCGTGCCTGAAGCCGTGAGTTCGCCGCCCACCGCGCACGCCAAACGCTGCCGCCGGGGCCTGGGCACTCTTCCGTAGGATGGGGCCTCGTGACCGATGCGCCGCAGACCCCTGAGACCGAGGACGACCTTCCCGAGCAGATGCGGGTGCGTCGCGAGAAGCGGCAGCGCATCCTCGACGCGGGTGACGACCCCTACCCGGTGACCGTCGAGCGCACGCACACCATCCGCGAGATCGTCGAGTCCTACGACGCCGAGGAGCTCGGCCCGGACCACCACAGCGGCGTGACCGTGGCCATCGCCGGCCGCGTCATCTTCCTGCGCAACACCGGCAAGCTCTGCTTCGTGCGGCTGCGCGAGGGCGACGGCACCGAGATCCAGGCCATGCTCTCGCTCGCGGAAGTCGGCGAGGAGCGGCTCGGCGAGTTCAAGCAGCTCGTCGACATCGGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 168986-174079 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQJX01000005.1 Aeromicrobium camelliae strain YS17T scaffold_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 168986 29 100.0 32 ............................. TGCCGCCCCGCCCGGAAGTACCGGCTGCGGAA 169047 29 96.6 32 ............................G TCGTCCTCGCCAAAACGACGTTCGTCGGTGCG 169108 29 100.0 32 ............................. GTGTTAGAGGTACATGGGGTGAAAGTGCCAGG 169169 29 96.6 32 ............................G TCGGTCACGCTCTCGGCATCCCTCTCGGACGG 169230 29 96.6 33 ............................G TCGGCGGTCATGCTGCATTCCTTTCGGTCGGTA 169292 29 96.6 32 ............................G CAGCAGGCCAGCCGACCAGCACCGGAAGGAGG 169353 29 96.6 32 ............................G GCGACGCCATCGAATTCGTCAAGTCCCACGGC 169414 29 100.0 32 ............................. ACGCGCTCCTTCTGCCCCTTGCCCCGCACGTA 169475 29 100.0 32 ............................. TTCGAGCCGACGTGCTTGACGAGGGAGGTGAT 169536 29 100.0 32 ............................. TTCACCGAACTGATGGTTCCGGGCCTTTCGCG 169597 29 96.6 32 ............................G CGGGGCATGGTCGAGTCGAACCCGTGCGCCGA 169658 29 100.0 32 ............................. GCCGTCTACCGGCTTCTGGTCGCCGGGAAGGT 169719 29 100.0 32 ............................. GCCCCGACGATGCGGGGCGTTGGTGGTTGGGG 169780 29 96.6 32 ............................A TGCGAAACGCCCCGACGATGCGGGGCGTTGGT 169841 29 100.0 32 ............................. CGGGCTGGCGACCCCGACATCCCCGGTGGTGC 169902 29 100.0 32 ............................. CCCAGGATCGTCTCCGGCGCCACCCACGACAT 169963 29 96.6 32 ............................G GCGATTGGGCGCTAGCTAGGGGTGTTCTTCGC 170024 29 100.0 32 ............................. GCGCGCGGGACCGTGCCACGAGCGGTTGTCGT 170085 29 100.0 32 ............................. GGCGAGGGCGGCTGGGACTGTGTTGGTCCGGA 170146 29 100.0 32 ............................. ATCGTCGCCGGCAAGCCCGTCTCGGCTGGTGG 170207 29 100.0 32 ............................. GCTTCTGCCGACGCCGCGCGCATCCGACGGGC 170268 29 100.0 32 ............................. GGTTTCCCCCTCCGGCACGCCTCAGCGATCGC 170329 29 100.0 32 ............................. CGTGCGGTGAGCGAGACGGCGATCAACGATCA 170390 29 100.0 32 ............................. CGTCGGTTGCCGGCGATCCGCGCATCGCGGAG 170451 29 100.0 32 ............................. AAGCTGGGCAACCAGCGGAAGGTCGAGCTCCT 170512 29 100.0 32 ............................. CGGAGATGAGACCTGTGATGATGCCAGTGATC 170573 29 100.0 32 ............................. GCTCCCACCGCTCCTTGCAGCTCGAAGGGGTC 170634 29 100.0 32 ............................. TCAGTGAGGGCGAGGTGGAGCTCCTTGGCCCG 170695 29 100.0 32 ............................. CGGACGGCACCTCGGAGCGACGCGGCCCCAAG 170756 29 96.6 32 ............................G GTCTACGGCAAACAGGGTCGACACGAGGCGAG 170817 29 96.6 32 ............................G TTGAGCGCTTGCTTGCCGCTTGGTGTGAACTT 170878 29 100.0 32 ............................. TACGCCGAGGTCGACGTCGAGGGCGACGTGAC 170939 29 100.0 32 ............................. TACTCCTGGCGAGCGATGAAGAGACAAGGGGC 171000 29 96.6 32 ............................G TGGTCGCCTGGCCAGCGCAGCCCGTTCGAGAA 171061 29 96.6 32 ............................T GCGGACGCGACGTCGGACTGGTCGCCCGAGCT 171122 29 100.0 32 ............................. ATCACCGAGCCCGCCGACTTCGACGATCACTT 171183 29 100.0 32 ............................. CGGACCAGTCGCGACACCTCACGCGACAGATA 171244 29 100.0 32 ............................. TCGTACAGATCCACGCCGAAGTACGGGTGCCG 171305 29 100.0 32 ............................. CGTCAGATTCCCCATGCGCAGGTACATCCGGT 171366 29 100.0 32 ............................. GTCCACGGACCCTGCACGGTCCAGGCGCTGCC 171427 29 100.0 32 ............................. AGGTGAGCAAGCAGGTCGCCGGCCTCGTCAGT 171488 29 100.0 32 ............................. CCCCGGGACGGGCAGGTCATCGCCGACCCGCA 171549 29 96.6 32 ............................G TTCGAAGGCTTCGTGTGATTCGAAGCCCTGCT 171610 29 100.0 32 ............................. GCGCCTTGAACTCGGCGTCGGGGACGCGAGTG 171671 29 96.6 32 ............................G CGAAGGTCCGCGAGTACGAGAAGGCCGCGCAG 171732 29 100.0 32 ............................. GGTGGGGTACGAATCGAAGTCCGCGAGCTCAC 171793 29 100.0 32 ............................. CTCGCGGTCGCGGCGGTGACCAACGGAATCGT 171854 29 100.0 32 ............................. GGCTTCCCGCGCCGACAGGCCTCTGCGATCGC 171915 29 96.6 32 ............................G GCGACGTCCTCCCAGGCGTTAGCTCGAGTTCT 171976 29 100.0 32 ............................. CACCTGGATCGGCGTAACCCTCTGGGGCGACG 172037 29 100.0 32 ............................. AGGGCATGAGCGACGCCCTGCGAAACCTCGAA 172098 29 100.0 32 ............................. ACGACGACCAACGGGTCGGCGCGGATGCAGAA 172159 29 100.0 32 ............................. CCGCTCGGGCGGGTGTGGATGGAGCCGTTGCC 172220 29 96.6 32 ............................G GCCGACAAGGCCGCTGAGGGCCAGAACGGCGC 172281 29 100.0 32 ............................. TCGGGGATCGTGCTCAATGGCGGTCCTGATGA 172342 29 96.6 32 ............................G AAAGCTGCCCCTCGGTCGTTCGAGGGGCGGTG 172403 29 96.6 32 ............................G TTGCTCAAGGAGATCCGTGACCTCGCGCGCCG 172464 29 96.6 32 ............................G TGCAGATGGGGACCGGTCGAGTTGCCCGTTGA 172525 29 100.0 32 ............................. CCACCAGGCTCGCGATGCCAATGCGAGGCCTG 172586 29 100.0 32 ............................. CACCACCGAACCGACCACGGAGCCGACGAACC 172647 29 96.6 32 ............................G TCCCAAGATCACGGGCGGCCTAGCGAAGAGTC 172708 29 100.0 32 ............................. TTCTCGTCCTGCGGTGCCCGAGCGTCGTGGTT 172769 29 100.0 32 ............................. CCAAAGCCCCCAAGCCCCTCATCTACTTCGGA 172830 29 96.6 32 ............................G TTCTGGAGCGCCGGCCAGAGGGTGCCCGTCAC 172891 29 100.0 32 ............................. TGGACAGACACCCGAGCCCAGGACGACACGAC 172952 29 100.0 32 ............................. CGACTTCGCCAGGCGGGGGAGGTACTCCGAGC 173013 29 96.6 33 ............................G ACCGCATGGACGCGGGTCAACAGGTCAGGTGCT 173075 29 96.6 32 ............................G GCGAGGAGGCCGTGCACGCCCACGAAAGCCTA 173136 29 96.6 32 ............................G CGCGCGCGGGAACGAGCGCGATCTGCCGAGTA 173197 29 100.0 32 ............................. GCGAACTCGTGATCGCCGGGAGGAAGGTCGAG 173258 29 100.0 32 ............................. TGGTCGCTGATCATGTCGCGCCTGTAGGCGGC 173319 29 100.0 32 ............................. TTTCACATGGCCCGTCACTTGCAAGCGTTCGC 173380 29 96.6 32 ............................G GCGCGCAGAGAGCCCAAGGGCTACGAGCAGGG 173441 29 100.0 32 ............................. TCGGCCGCATTGATACCGCGGTTGCCGAACTC 173502 29 100.0 32 ............................. CACTCGTTGCGATACTCACTCATGTTCGCAAA 173563 29 96.6 32 ............................G GTGTCAAGCCTGGTGACGTTCTGGCACGTGGC 173624 29 100.0 32 ............................. GGCATCTCGTTGCACTGGCCCGGCGGCGGAAC 173685 29 96.6 32 ............................A CCCATAGACAGGTGCTATCCAGTAGATGCCAA 173746 29 100.0 32 ............................. AACGAGGGGCCGGTTCACAGCGGACCTCCGAG 173807 29 96.6 32 .........A................... TGGTCCGCGGTGCCGTCGTACAGGCCGGCGGC 173868 29 100.0 32 ............................. AACGAAAGGTGCAGGACATGGGCCAGGGATGG 173929 29 100.0 32 ............................. GTGCAGTGGCTTTGCTGGCCGTGCAATAGCTC 173990 29 100.0 32 ............................. CTGAGCGGGGCCAACCTGCGCGGGGCCAACCT 174051 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 84 29 98.9 32 CTGCTCCCCGCGTGAGCGGGGATGATCCC # Left flank : CACAGGTCGCCCTTCCACGCACCGGCGTCGAGACGAGCGATCTCGGCCGCGGTGAACGAGGAGATCGGGTCGCCTGCTCGGCTGGGGAACACGCGGGCGACGTCGGTGGTGCGGCGCAGCGTCTGGTCGTGGTGGGCGACGACGTGACCGTCCGCGGTGAGGTGGACGTCGAACTCGATGCCGTCGGCGCCCAGCGCAGCGGCGTCGAGGAAGGCAGGAAGGGTGTTCTCCGGAGCTGTCGAGCTCTGCCCCCGGTGGCCGTTGACCCGGGTCGTGCGCAGTGGTGTCCTGGTCAGCTGCGACGGCGTGACGATGGGCTCGGACATGTGGTCCCCCTCGTGGGCGAAATCCCTGTCGCGATCCAGGCTGGACGGCACGCGTGAAGGGTGAGCCGACGTGACATGAACAGCGGACGACGAGCGACTGAGGACTTACCGAGAACGTACTTACAGTTCATCCGCTAACATGGATAGCGCTAGAGTCTCCGCAGGTCACGAAGA # Right flank : CGCGTCGTAGGCCTCGGCCTTGGGGGCAGCGATGTGCTCCCCGGGTGACGTCCCGGCTGGTGGTGTAGTTCCTGGTGTTGGCCTCGATCGCTCCGCTAGGTGGTTGCGCTGGCGCTAACGGGTCGCCGTTCAGCGCGCGAAGCGCCGCCGCTTGGCGGCGGCGCTCCACCCGGAGGGCACCGTTCGCCCTGCGGTGCCGCCGTCGTCAGAAGGTCGACGCATCAACGTGACACCATCAAGGTCCACCGGTTCCCAGTGATGCCGGGCGACCTTGAACTGGAGCCGTTGTTCGTTCCTGGCGCTGTAAACCATGATTGCCCTGCCGGTCGCGCTGAGTTCCACGATGCGGGCCCAGAGTCGTTCGCGAACTCGCGTGGAGGCGACACCGACGTAAACGCCTGGACTGATCTCCAGCAGCCAGCGCGTCAAGTCGCCGCGAAGCCGCTCCGGTACCACCGTGAGGACGACAACGATCACCAGTCGACCTCGTGGTTCATTCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 183407-186001 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQJX01000005.1 Aeromicrobium camelliae strain YS17T scaffold_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 183407 29 96.6 32 ............................G ACCTGGCCGACATCAGCGAGCTGCACGAGTAG 183468 29 96.6 32 ............................G TTCGCCTGGTCGGTTCGGTGCCGTTCGAGTTC 183529 29 96.6 32 ............................G TACGAGGGCGGGCAGGCCCGCGAGGTCACGCT 183590 29 100.0 33 ............................. GGCTCGGAAGCGTTCGGGCAGCTCAGGTCGTGG 183652 29 96.6 32 ............................G TTCTGCCCCGTGTGCGGAGCGCAAATGTTCAG 183713 29 100.0 33 ............................. GGTGGTGCGCTCAGGTGGCCGCCGATCCATCAA 183775 29 100.0 32 ............................. ACCGATGACCTCAGCTCCCAGGACGTCCGTCT 183836 29 96.6 32 ............................G ATCACCGCCGAGCCACGGTCGGACCAGATCAA 183897 29 96.6 32 ............................G TGTCGGGCGAGATCGGCCGGCGCATCGAGTCG 183958 29 100.0 32 ............................. GTCCAGGGCACACGCCACTCACGGGCGGCGGT 184019 29 96.6 33 ............................T GGCTCGCGCTGTTCGGCGCAGTTCTTGCGAACC 184081 29 100.0 32 ............................. ATCGCCGCTCGCACCATCTGTTGCTCGTGGCG 184142 29 96.6 32 ............................T GCTGCGCCGCTGGTGGACCTCGACACGCTCGT 184203 29 100.0 32 ............................. TTCTGGTCCCAGTTGATCGTCAGCGGCGGGAA 184264 29 96.6 32 ............................G GTGTGGCTCGATGACGCTGACGAGGTGCACGT 184325 29 100.0 32 ............................. CCACCCGCGAGGAGATCGAGGCGGCGGCGCGG 184386 29 100.0 32 ............................. GAGATCAGCCGCGTCACCGGCCTCGACATCCC 184447 29 100.0 32 ............................. CCCAAGGGCTGCAGTGGGGTCGCGGAGTGGAA 184508 29 100.0 32 ............................. GCTCTCGGGTTGGCACCCTTCGCGGTCGTCTT 184569 29 100.0 32 ............................. GGGCCGACACCTCCCGGACCGTTTCATCGATC 184630 29 96.6 32 ............................G ACCCTCGCGGCCGTGACCAAGGCACTCGTCAA 184691 29 96.6 32 ............................G GCGTAGTCGATCGCGCAGACGATCGGGTGCTG 184752 29 100.0 32 ............................. ACGACCTCGCCGTCGTCGTCGGTGCTGAGCAT 184813 29 96.6 32 ............................G CGCGAGGCGGGCTCGTCAGGGTCGGTGAGGAC 184874 29 96.6 32 ............................G TCGTCGTCGCACCGAAGGAGAAGTGATGAACC 184935 29 96.6 32 ............................G TACCCAACGAAGGCCAAGAAGGGTCCGGACTG 184996 29 100.0 32 ............................. TCGGTCATGCCGCCTCCAGTGCGTCGAGGCGA 185057 29 96.6 32 ............................A GAGGCGTGGAGGTGTGCGATGCGACGTAAGCT 185118 29 96.6 32 ............................G TTCAAGAACGGCGCGACGATCCGCTTCAAGGC 185179 29 96.6 32 ............................T GACCCGCGCCGGACCATGCCACGACACCGGAT 185240 29 100.0 33 ............................. TCGGTCATGCCGCCTCCAGTGCATCGAGGCGAG 185302 29 100.0 32 ............................. AACAACCTGGCGGCGATCCGCGGTTGGCTCGC 185363 29 96.6 32 ............................G GTGGGGGGCCTCGGCTTCGAGAGCGCCTCGTG 185424 29 100.0 32 ............................. CGATCGTCACCGGCCAGGTGCAGCGCAAGTCG 185485 29 100.0 32 ............................. CCGGTCTACACCGGGCGCTTCTCGGTGCTGGC 185546 29 96.6 32 ............................T GCCTTGACGGTCGGGTAAAGGTTCTCCGCGTC 185607 29 100.0 32 ............................. GACGTCGGCGGTTCGTTCATGTTCGCTGGAGC 185668 29 100.0 32 ............................. CTCAGCCGCTTGCTCGTGCGCGCCCGGTGCCA 185729 29 96.6 32 ............................G GCACCGCGAACACCGGCTTTCGTGGGCGTGCT 185790 29 96.6 32 ............................G TGCTACCAGACCACCGCTCCAGGCGGCCCGTC 185851 29 100.0 32 ............................. CGTCCCCGGCAGCCTGGACCGCGTTGGCGAAC 185912 29 100.0 32 ............................. CACCTCACCGAACTGTTCAATGACGCAATCCG 185973 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================= ================== 43 29 98.3 32 GTGCTCCCCGCGTGAGCGGGGATGATCCC # Left flank : CACCGTCTCCGGTCTTGGCCCAGAAGGTCCGCGCGAGAAAACTGGGGTCGTGGCCGGGTTGGATGTTCATCCAACCCGGCCACCGAACTTCACCGGTTCCGCCCCGGTTTCTGAAGCTCTCTGCCAAGCTGACTTACGCGCACTCACCAACGCCCTCCCTCCTCTCCGGCCGAGCATGCGAGAAGGCTACGGGTGAGTTGGCCTTGGGTCTACCAACAAACACCTTCGTCTTACTAGCCAACACGTTAGCTGGTCGGGGAGTCGTCCCCAGAGATCCCCGCTCGCGCAGGGAACAGCCACTTACCCATGGCACACAACCAACCAACACCGGATCATCCCCGCTCACGCGGGGAGCACCCCTCGACACTACCTGTTGGTGGTGACGCTGCGATCATCGCCGGATGCCTTGCCTTCATGTCCCCCCCCCACGTGATTGGTCAGCTGGCTATGTGAAACTGATGCCGTTATGACTTGTACGTTGCTGTTTGTGCAGGTCAAGA # Right flank : TCCTTTTCGGCGCGAGACAGCACCTCGTCCCAGTGCTCCCCGCGTGAGCGGGG # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.72, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //