Array 1 218614-219244 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXPP01000003.1 Enterobacter mori strain SCEM020047 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 218614 28 100.0 32 ............................ TGCTGCTGCACGACGGTATCGCGACGCACAGC 218674 28 100.0 32 ............................ TTTGCCATACCCTGCGCGGTGTACATGCGATA 218734 28 100.0 32 ............................ AAAACGGAAAGAATAATCGCTTTATATATGCT 218794 28 100.0 33 ............................ ATCAAACCGGTAACGCATGCGCCATACCTTTTT 218855 28 100.0 32 ............................ AATGACACTACTGAAGGTCATCAGGCTATTCG 218915 28 100.0 32 ............................ GGATGCAGTCTAAAATTTCCCCTCTTCACTTC 218975 28 100.0 33 ............................ AGAATGAGACACAGTAAGCGCGCGGAGGTGATC 219036 28 100.0 32 ............................ GATTATCGTTTCCAGTTGCGTGACGCTTATTT 219096 28 100.0 33 ............................ GTTCCGCCGTAAGGGTGCTGACCTTTCGGACAG 219157 28 100.0 32 ............................ ATCGAAACGAAACATCTACAGCTGAGCGAAGT 219217 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 11 28 98.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAAAGGTGAAAACCAGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGCGGAACAGCCGCGACAAAAAGAGTGGTTGCTTGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCGATGGCCGCGGATGTCGTTGCACCTCAACGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCAATGCGAGGCGTCGGGGGTGTTCCTCTGACGTCATTGGTTTATACCCTTTTTTCTGATGTTCACGTAACGTATTGATTTATATGGTGCGTATTTACGTTCCAGAAAAAAGGGTTTTATGCGTAAAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AAAACTATCCTTCGAAAACATTCACCTTACCTATTTAAACCTTAATACCATCAAACCCGCACTCTCTATTTTTCACAATAAATAAAAAATTCATTCACGCATAAATTATATTCTAACGAATATATTATTCGTAAAAATAATGCATTAAATGATAAAGTAATTTTTCGCTTTATTATCATGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTCCGATAACATACCGCGCATTCAACATCTTGAAATAAAATCCCTTGCTATGTCCGTAAACAGCATCACCCCTACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGTCGCATCCAGGTTAATGGCGGACGCGTTGAATATGTCACCCAGGAAGGCAAAGAGTCGTTTTACTGGAATATTCCCATCGCCAATACGACAGCGGTAATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 228732-229846 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXPP01000003.1 Enterobacter mori strain SCEM020047 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 228732 28 100.0 32 ............................ TTTTGTAAAATGGGATAACTACTTTATTTCCA 228792 28 100.0 33 ............................ ATAGCTTCCGGCGTAACTGCCACCACTCTTTCA 228853 28 100.0 32 ............................ AGTACGATGCTGGATACACGCAGGCGCAGGCA 228913 28 100.0 33 ............................ ATAAAAGAGCAGCGCAGAAAAATTGCCCGTCGT 228974 28 100.0 32 ............................ TTTTTGTCTTTTTCCCCGCGATGAATACCGAC 229034 28 100.0 33 ............................ CATATATAGAATTTAATAAAACTTTAGAAACAT 229095 28 100.0 32 ............................ AGCCAGCGATGGAAGATGTTCTGCTGGTTGTT 229155 28 100.0 33 ............................ GTTATGGCCGCCCGATAGCGTATTACTTTACGA 229216 28 100.0 32 ............................ GAAAGAGCCGGAAACACTCAAAGTAAAATATC 229276 28 100.0 33 ............................ GGACGCATGTAGCGTGTGCGAGTGCGCTCCGTC 229337 28 100.0 32 ............................ CGGACGCACCGGAAACCAGCCCACCCATATCA 229397 28 100.0 32 ............................ ACAGCTGCGCTTCCATCATCTTGAGCGGCCCC 229457 28 96.4 32 ....T....................... ATTTTTTCACCAGATTCCCCGAACCGAGCAGG 229517 28 96.4 32 .......A.................... AGCTTCTTTTTCGGGTCTTTGCGGTCCCTCAC 229577 28 100.0 32 ............................ CTTAATTCTATCTCCGTATCGTCATTGTAATA 229637 28 100.0 32 ............................ AAAATCAAAAGCCACGGAGCGTGCAATTGCGC 229697 28 100.0 32 ............................ GGATAAAGTAAAACCCGCGAGGTGCGGGTTTG 229757 28 85.7 32 ..A..........G...T......A... CTCTGCCATTACGCACTGATGCGAGCGAACTC A [229761] 229818 28 85.7 0 A.C........C...C............ | C [229842] ========== ====== ====== ====== ============================ ================================= ================== 19 28 98.1 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGAAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGTGTCCGTCCCGCGCTTTTACGGCGGGCCACGTTACGTTCGTTAATCCCGGTGACGCGCAAAATGTCCGCTTTAGACATCGCCGTCCATTCATGAATATTGTCGAGGACGCTGACGGGTAAGCCCTGATTGAGAAATTCAATCAGTCGCATACCGCGGTTTGCGGGTAAACCGGCGTAGCGCCAAAGCGCGTTATCAGCAGGTCTCTGCGCGGGGATCCATGTTCTCATGTTTCCTCCTGAGTAATGTCATTTGTCATGGTTAATTATAGTCATTTGTCAGGGGGAGGGGAATGAGTGTTTTGTATGCAGGGGGAAGAGAAGAGGGCATTTGACCCTAATTTTTAGTGTGTTCGTAATATATTGATTTTAAATGGATATTTTGAGTGGGTAAAAAAGAGGGTAAAAGAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGGGATATTATTCCA # Right flank : AATAGAAAATAAGGTCTCATCCCCCTTACTCTCCACACTGTCGAACAGACAGCCCGGAAGCTGAACCGAACCGTCAAATAATTGTTCAAATAATCAACTGCGCCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCAGCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //