Array 1 36960-36391 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPM01000071.1 [Clostridium] symbiosum strain MCC354 NODE_136_length_119157_cov_61.088596, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 36959 33 100.0 33 ................................. AGCAATGTCCAAGCCTTTTCTTATTCCTTCGTG 36893 33 100.0 35 ................................. TGGATTACGTAACCGTAATACAGAAAAACTTGACA 36825 33 100.0 33 ................................. CGGAGGGGAGGCGAGGAATATCAGCGAATTTGA 36759 33 100.0 34 ................................. AGACAGAGGCGCTACAACCGGAAACAGACAATAA 36692 33 100.0 34 ................................. TTCTGCTTACAAAAAAAGCGGTTGAGGGGCTTTT 36625 33 100.0 34 ................................. CGTTTGTTTTAATGTTGTCTACAATCAATGCAAT 36558 33 100.0 35 ................................. CAGCTACCTCCAGGGTCATCGGCAGCCGGCCAATC 36490 33 100.0 34 ................................. CTGTTCTCGCCGTAAGCCTGCAGCATCCGTTCGA 36423 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 9 33 100.0 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : TTGCTGGAATTGTTCCAATGGAAATCAAGTGAGGAAGCGGTAGAAAATAATCTGGATAGAATGAAGGATGAAATTGCTGATATCTTTATATATCTGCTTATGCTTTCGGATGATTTGGGGTTAGATCTTTTCAGTGCGGTTACTGAAAAAATGAATAAAAATAACGGAAAATATCCAAAAGAGTTATGCAAGGGGAAGCGTGATAAGTATACAGCCTATTTAGAGTGAAAATTAAACATAATATTTCATTATTACATTGCTTGTTTGAAAACTGTAGGGTTAACTATGGGTTGATTTGATGGGTATTGATCTTTAGTAAGAAGAACCAAGTGCGAATAGTAGTTGTACATAAAATCCCAGGGAGATTCGCACTACAATTGGCCGGAAAATACTATTAAATTACGCGAGGAAATTTCAACTTGATAAACGATTTGTAGAAGATGTATAATATGAAGCATGTAAATGTGGCATAGATGCAAGAATAATTGTGCATTTTTGCC # Right flank : TTTATAGGTGGAATAACTTTTTTATAGACCTTGTAAATAAAATCGCTTAATTTAGATTTGCTTCACTTAGTCTGTTCGATGACGCTATCAAAGCCATATCAATTCCCCCTCCAAAACTAATTCAAAATAATGATTGACTTTTTAAACTGTAACAATTATACTTACAGTAAAGAGAGCAGAACATACATTTCCCAATAATAATAATATAACTAACACATAAAGAAGTATCAGAACCCACTTATCCATCAATAATATATACATCATTTAAAGGGAAATCCCATCTAATAATTGCAATACCACATTATTTATGAAGATAAATAATCGAAGGCCATAATAAAGATATGCTCAGGAAAGAAGGTATATAAAAATGGTAGTAAACTTAAAATCCAACACAGAACCTAATCCGAAACCAGACGATAGCCAAAACTCGGAGATAAGCAAAAATACGAATAATGATATCATACCCACTCAAAAAACTAACATAGAAAACACGACAAAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 15798-9569 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPM01000011.1 [Clostridium] symbiosum strain MCC354 NODE_14_length_95988_cov_53.367172, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 15797 32 100.0 33 ................................ CCACATCTGCTGATGAATCCGATGATTTTGAAT 15732 32 100.0 34 ................................ CTTTTTGAATTTGACGGTGACGAGAAGTCCATCC 15666 32 100.0 33 ................................ ATTAAATTACAGCCTGACTATGGCGGAATTATG 15601 32 100.0 36 ................................ TCGGTTAGGTGCTTCGTACATTCTTGTGCTATTATC 15533 32 100.0 35 ................................ AATGACCCAAAAATGTAAGAGTTAGGATTGCAATA 15466 32 100.0 35 ................................ TGCAGAGTTAGCATGCCCTATAGGTAACACATCAG 15399 32 100.0 34 ................................ AATGACCCAAAAATGTAAGAGTTAGGATTGCAAT 15333 32 100.0 34 ................................ ACTATATAAGCCACACCTAAGTTAGTAGAAAGAC 15267 32 100.0 34 ................................ GGTTTTTAGGTAATCTGCTTTGATTAACACACTT 15201 32 100.0 33 ................................ CGTCGTTACGTTTGATGATCTATATGAGATTTT 15136 32 100.0 33 ................................ CTCCTATAGAAGAAGCATAATCAATACAGCCTT 15071 32 100.0 33 ................................ AATATTGCGCCACAGTTTCCAGATGGGAATAGT 15006 32 100.0 34 ................................ CAACGGATAATCTTCCACCAGTTACATAAATATT 14940 32 100.0 35 ................................ CTTTATGTGTAAATCATTAAGCAGAATCGTTCAAT 14873 32 100.0 35 ................................ CGGCAAGAACAATATCTCCAATCGAAGTAAGAAGT 14806 32 100.0 34 ................................ ATTGTGTTATTACTTTGAGTGAATGAGGCTCTTG 14740 32 100.0 34 ................................ AGAATAGTGGAACTTTTGTAGCAGGTGCGGCTTC 14674 32 100.0 34 ................................ GACTTAGAGTTCTGTTTGCAAATGACCCTACCTA 14608 32 100.0 34 ................................ CGTCAAAGTGTCAGTGCTAGCTGTAATTTCAGTT 14542 32 100.0 34 ................................ ATCTTACCCAGCGTTTCCATGTAACTAATTTCGT 14476 32 100.0 33 ................................ ACTTTTGTTATCGGCTGTTGCATCATCTATAAA 14411 32 100.0 33 ................................ CCACGTCTTTTGATTCTTTTCCTTGCTGTCCCG 14346 32 100.0 35 ................................ TCGGGAACCTATTCATATCCAAACATACGAAAGGA 14279 32 100.0 33 ................................ TGCACGCTTTACCTTCACTTCATACGGCAACGC 14214 32 100.0 34 ................................ GATCCATTCCTTCCATTCCGTAAAACTTTCTTTT 14148 32 100.0 34 ................................ TATGGAGCCGAGAATCTGCGAAGGGGACGTTGTT 14082 32 100.0 33 ................................ ATCTCTGACATGTTCGATAACCGGCAAATGACC 14017 32 100.0 34 ................................ ATGCCCCCGGTGCATCAGGCGGTATTCCTTCGTA 13951 32 100.0 33 ................................ CCTTATTCATGCTTCGGGCGGCCGGGCTGGGAA 13886 32 100.0 34 ................................ CTGGAACTGTGGCATCTGAATGTCCAGACCGAAG 13820 32 100.0 34 ................................ CCAATCATCAACCCAAAATTATCAGAAGACAATG 13754 32 100.0 34 ................................ CGTCCAGTTCGGCGGTGCATCCCGGGCCGAAGTG 13688 32 100.0 34 ................................ CGATACGGCCGCGATTGGCTATCAGACAACTATC 13622 32 100.0 34 ................................ GTGACATCCGTACTTGCAATCTCCTGTGGATAGT 13556 32 100.0 34 ................................ ATAGGCACATTAAAAAAAGCGTTGGTTGTAGCCG 13490 32 100.0 34 ................................ CCTCCAATTCTTTCATCCTACCACAAATTCCAGT 13424 32 100.0 34 ................................ ATGCATGGAGCCTTTGACGGAATCCTGAAGAATC 13358 32 100.0 34 ................................ TGAAAAAGTGTCTCTAATTCGGCCAGCAAATACG 13292 32 100.0 33 ................................ GAATGTGTTTGTTTCGTCAAATTCTCCGGTTAC 13227 32 100.0 34 ................................ AGTTGCATCCGCCACCAAGACAACGCCATCATAA 13161 32 100.0 35 ................................ CCATGGAAACACGATCCGAAACGCCGACCAATGGA 13094 32 100.0 33 ................................ CGTACAAAGTAAGTAAGGCAACCGGTGTTTCTC 13029 32 100.0 34 ................................ TCCAAATCTTTCTACCATTTCCTTTACTTTTAAT 12963 32 100.0 33 ................................ AGTTAAATGGCGAGATGAAACAGAATTCTTTCG 12898 32 100.0 35 ................................ GCCGACAACGGAGAATGTAAAAGCTTGGGGAGGCG 12831 32 100.0 34 ................................ CTTTGAGCGATTTAAAGAGTGGTTTCTCCGGTTC 12765 32 100.0 37 ................................ AAAATTCAGCAGGCCTGTTCGTTGAGTCCAGTTATGT 12696 32 100.0 33 ................................ TTCCGCCACTTCCGCCCATGTAACGAAAATACT 12631 32 100.0 33 ................................ GTCATTATTAGCGTGACCAAATCCCATGCACTT 12566 32 100.0 36 ................................ ACATTTAATTCCTCTTGCCATCTGAATGCAACCCGC 12498 32 100.0 35 ................................ GGTACATCCGTACATTTCCTTGATTCGATAAATAC 12431 32 100.0 34 ................................ CATTTCTGACTTTGTTCCACCGTATCCCAGTTTC 12365 32 100.0 33 ................................ TCTTCAAATAAATTGAGCTGTTACTCGGTACAC 12300 32 100.0 34 ................................ AATAACAAACTTGAATTTACGCAGAAAGAAATTG 12234 32 100.0 35 ................................ AACTGAGATCGTACTGTCAGCCGTATCAGTAGCAT 12167 32 100.0 34 ................................ TGGATATTAAAATCGATATCGTCGGTTGTAATCT 12101 32 100.0 35 ................................ TGTTGCAAAGTATAGTAAGTGCAAGAGAGGTGTAA 12034 32 100.0 34 ................................ GACGGCCGTAAGTATCTACTTTGCCCAGATAAAG 11968 32 100.0 34 ................................ CATAGCGGCGTTCCGCGTCTCTGGCCGCTTCCTG 11902 32 100.0 34 ................................ TTTTAACCGGCATTCTGAAATTAACTGAATTGCT 11836 32 100.0 36 ................................ TTCTTTGTATGCACATCCGGACAATCTGGGCAAATG 11768 32 100.0 32 ................................ TGACCACAGGAACCTTCTGGCGAAGGGGAGCG 11704 32 100.0 33 ................................ CCCATCCGAACTGCAACTTGTGCCCAAGTCAAT 11639 32 100.0 33 ................................ AAACGAATGGGGGCTTATTGCGTCAGTTTTGAA 11574 32 100.0 34 ................................ AATCACGCGGTTCTTACTGCCTCCGCCAGAGTTG 11508 32 100.0 34 ................................ GATTAATCATATCCGTACCACATGTTCGTCTAAA 11442 32 100.0 35 ................................ TTGTAGCCTGTATAAAAGTACCTTTAACCATAGGC 11375 32 100.0 34 ................................ TATGTACCCGGCTGAGATAAGATCGTCCAGAATA 11309 32 100.0 32 ................................ TACCCGTAGCGTCATATTCATAGACGTTTGAA 11245 32 100.0 33 ................................ CGATAAAGGCTGGAATATTGGATGCGCAAAGAT 11180 32 100.0 34 ................................ GAACTAATATCTCCACTACTATTATCATTTGATG 11114 32 100.0 33 ................................ TGCCATCTCCACGGATTATATCCGCTCTCCGCT 11049 32 100.0 33 ................................ CTTGTGCAAAAAATACATAAGAGAGCTTAGAGT 10984 32 100.0 33 ................................ CGTCAGTTGCAAGTATTAACTTCGGTTGGTGGA 10919 32 100.0 34 ................................ AGCCTGAAACACCGGAGGATGTATTGGCAAGCAT 10853 32 100.0 36 ................................ GAACGTTGTGCTGAAAGATTCCACCTACACGCTGGG 10785 32 100.0 35 ................................ TTTGTTTTACGTGACAGCGGTATCTCGGAGAAGAA 10718 32 100.0 34 ................................ TAAACAGCGGATTAGTAATTATGCAATGTGTCGG 10652 32 100.0 35 ................................ CGTCAGTTGCAAGTATTAACTTCGGTTGGTGGAGT 10585 32 100.0 33 ................................ GAACGTTGTGCTGAAAGATTCCACCTACACGCT 10520 32 100.0 37 ................................ TTAAGCTTGATATGTCCTTTAATGTCTCCGCTTACAA 10451 32 100.0 34 ................................ ATGAGAACCTTGCAAGAGCTACAGTGGCTAACTA 10385 32 100.0 34 ................................ GATACAACGAAGCTTTCAGGGACAAGCATATTGA 10319 32 100.0 33 ................................ TGGAAAGCCTGTCTGAGCCGGTTAATTTCACGA 10254 32 100.0 34 ................................ CCGATCACTAATTGAGTAGTTGAACCCTGGAAAC 10188 32 100.0 32 ................................ TTTTCAATATTAATAGATGTATAGCAATCTTT 10124 32 100.0 34 ................................ TGCGGTTACAGCGGCAGTTGGACAGTCGGTGCAG 10058 32 100.0 33 ................................ TATAAAGGAAATGAAATGCTTGAGACATCCGAT 9993 32 100.0 33 ................................ CGATTGCAAGGTATTTATTCCCACTTATCCAGT 9928 32 100.0 33 ................................ ACCACAACATTTACAATCGTTCCGCCAATTTTC 9863 32 100.0 33 ................................ TGTCAAATCCTCAAATTACTGAATAAATCCATC 9798 32 100.0 34 ................................ GTCAATCAATTCCCCATCCAGTGAAGCATGCATC 9732 32 100.0 34 ................................ CATCAGGTTCTTCGGCTTCTCCCTGATGGCGTAG 9666 32 100.0 34 ................................ ACGTACAAGGGGCCGTTGACAAGTTTAATCAGAT 9600 32 87.5 0 ..........................T..GGT | ========== ====== ====== ====== ================================ ===================================== ================== 95 32 99.9 34 GGTCAGGCTCGTAAGAGCCTGTGGATCGAAAC # Left flank : GAAATGAGGTGATGGATTTGCTCGTTCTTATAACCTATGATATTAACATTACAGAAGCCGCAGGGGCCCGCCGTTTAAGGCGCGTAGCCAAGCAATGCGTAAATTATGGCACACGGGTACAGAACTCTGTTTTTGAATGTCAGGTGGATGCAACGCAATATGTGAAGCTAAAACATCTTCTGATGAAAGAAATTGACGAAGAAAAAGACAGTCTGCGTTTTTACTCTCTAGGTAATCATTATAGCGGTAAGGTTGAGCATTTTGGCGTGCGGCGCGGGATACAGGTGGATGAACCTTTAATTTTATAAAAGAACCGCAGGGAAGATGTCTTGCCTTATCAGTGCGAACCCGAAGTGAACATGAATTCTGTGGGAGGTTCGCACCTGGATTTTGGTGTAAATTGGCGGGGATTCTGGTTTAGAGATAAAATTAAATATCATATTTGGATGATTTGAATAAAAAGTAATGTAAAAAATACTCTAAAACCATGAATTTTTGCT # Right flank : TTTATTGGCGCAAAGAGGTGTGGATTCCGGGGATAAGAGATCGGCAGATGAAATCTGTCAGCAGGAACTGAAGAATGCTGTCTGCATCACACTTAAGGAAAAGGGGGCTCAGGAAAAGGGGAGTCTTATGAAAAATGTGATCCGGACGATGGGGGATGTCCGAAGCAGTACTTCCTTAGTGGAGGCTGCTGAAAAGGGGATGAAGTATGGAAGGAAGACAGGGGAGATTGTGCAGGATGAAGAGAAGCAGTTTAGGCTGGGAAATTGACAATCTTGCTAAACTGAAAAGTGCAGTTCGCTAAGGAAGAATGATACCCGGTGTCAGAAAATAGTTTGGAGAAACTGAGTAACAACAGCAAAAACAATCATTCATAGCAATTAAATCACCAGAAGAATTTACCTGCACATTAGGAAATGATTAATAAATTCTTTAGCATTCAATAATACAATAATTCAAAAGATTTATTATAATGTTAGAGGAGATAAAAATCATGGAACGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCAGGCTCGTAAGAGCCTGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GGTCAGGCTCGTAAGAGCCTGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //