Array 1 479684-477474 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABTR02000001.1 Dethiosulfovibrio peptidovorans DSM 11002 ctg1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 479683 30 100.0 35 .............................. ACAACGACGTGAACCAGTTCGCCGGAACAGACCTC 479618 30 100.0 36 .............................. GAGAAGGTCTTGACCCCAACAGAATTCGTAATTCTG 479552 30 100.0 36 .............................. AGTATCTCTCTCAGGAGGTCAACCTCCCTGTGTATG 479486 30 100.0 35 .............................. GTTCATGGACAACGAGCGGCGCTATGCACCAGAGG 479421 30 100.0 36 .............................. GCTTCACCAGCGTCTGGTCAATAGAGTCGGCCAACG 479355 30 100.0 36 .............................. GATCACCGGACTCGAATTTTAACTTAGGGACAGAAA 479289 30 100.0 36 .............................. GTCAGAACAGACCGTTTTACCCTGACGGCATAGTCC 479223 30 100.0 35 .............................. TACAAGGGACTTTGGAGCATCAAAGGGGTTAGATG 479158 30 100.0 36 .............................. CCCATAGCGTCGTGGTATGCCCTACACTCTTCTACG 479092 30 100.0 36 .............................. ACAAAACGGGCATAGGTGGGATCGTCGTCTTCCTTA 479026 30 100.0 36 .............................. CCGGATGAGAACCTCTCCGGTCTCGGGGGTGTACCC 478960 30 100.0 37 .............................. TGGACAACGAAGCTATGGACCTCTTCACCGGTTTTCC 478893 30 100.0 37 .............................. GGTCCTTCCATACAACAGAAGCATAGCTTCCTTCCCC 478826 30 100.0 36 .............................. CATGTACAGAAGCCCATTAGGGGTTTCTTCGTAAGC 478760 30 100.0 36 .............................. GTCGTTTCCTCAGCCATTCAGGAAGACTCCGCCCCA 478694 30 100.0 37 .............................. TGCCCCAAAAACTCCACACCTGAACATTCACACACAA 478627 30 100.0 37 .............................. TTCTATCCCCGGGGTAGAACCTTCGGCCTACGTGGAC 478560 30 100.0 37 .............................. GTCCTATAATGGCTATGGCGGTGTATCCTAAGATTTT 478493 30 100.0 37 .............................. TCTGGTCGTTATATAGCCTCATAATTAATTCCTCCTT 478426 30 100.0 35 .............................. AGATTACTGGTATTGATATTAGGAGGATAGGATAA 478361 30 100.0 36 .............................. CAGGATCGTTCCACGAAACTATAGCCACACTATGTC 478295 30 100.0 35 .............................. CGACCAGCTTTCTGTCAATCCTAGTGTGCATATTG 478230 30 100.0 36 .............................. ACAATCAAATAATCACGTAATCTACCTACATCTATC 478164 30 100.0 36 .............................. ATCCGAAAGGGTGCCGAGGCACCCATGTGGTGCCGT 478098 30 100.0 36 .............................. GTAATCATGGTAAGGGCGGAGGAGCTATAGAGGAGC 478032 30 100.0 37 .............................. CGAGTAAGGTAGGGCGGTACAAGGCGTTTTGGTGGGT 477965 30 100.0 36 .............................. CAGAGACAAGCCGTACTCTTTGTTAATATCCACTTT 477899 30 100.0 35 .............................. TTATATAGTTACGACTTCCTCACCACGCCATACTC 477834 30 100.0 37 .............................. GAGGACCCCACACAGCCTCTGGAGACGACGATCATGC 477767 30 100.0 37 .............................. GGTCGTCCCTGATCTCCCGGAGATAGCCTTCTGCCCC 477700 30 100.0 36 .............................. TTTGGAAGTAATGAAGGATATCCCAGATGGTAGTAT 477634 30 100.0 36 .............................. GATTCAGCTAACATAGGTAAGGACACAAAAATAGGG 477568 30 100.0 5 .............................. TCGAA Deletion [477534] 477523 30 76.7 4 ....................CTT.T.G.TG TCCC Deletion [477490] 477503 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 35 30 99.3 34 CTTTTGGATGTCCCTATGAGGAATGGAAAC # Left flank : ACATCTCTGGGTGGTGATCGCTGGTGTTTGTTATAATGATATACGACGTAGGAGAGAGACGAGTCGCTAAGATGTTGAAAATAGGGCGAAAGTACCTCAACTGGGTTCAAAACTCCGTCCTTGAGGGCGAGCTTTCCGAGGGGCTTCTTGCGAAACTCAAGGCGGAGGTTAAGCAAAAAATAGACCATGAATCGGATAGCGTTATATTCTACACCTGGAGAAGTGAGAGATATACAGCTAGAGAAGTCATTGGAATAGAGAGAAATGAAATAAACATTATTGTATAGATACCGAATAGTCTCTGTCGATCTCCGATGAGGTAAAAACTACGGGGGACTGACAGAGACATGTTTTTTTGCGTCCCATACACTTGAATTCAGTGGTAGCATGGTGTAGAATAACCTCAGTCGTCGATTTTTTATCTATTTTGCAGGGGTATTTAAGAGGTTTTGTCGATATGATTAAACGCATAAACCCTTGTAACCACTCAGCTCCTGTGG # Right flank : TGAAGCTCGCCCAAGGTCCTCAGGTTGGCGGTCAACTTTTGGATGTCCCTATCCCTACCTGCCAAAATAGGTGTCGCATGATAGACTAGTTTAGCGAGTCGAGAGAGGCTCCCTGGAGGTGCGACACATGGCGAGGTACAGCAAAGAACAAAAAGAGGCAATCAAAAAGAGAATGATGCCGCCGGAGAACATGTCCATACCTAAATTATCGAAAGAGACTGGCATAACGGTGACAACCCTCTACAACTGGAGAAAAGAGCTCCGTGCGTCCGGCAAAGCAGCTCCCTGCGACGAAGATAGACCGGATAGCTGGAGTTCCAGAGACAAGTTCCTCATAGTCCACGAGACCTACACCATGAACGAGGAGGAGCTGGCCCGGTACTGCAGGGAAAAAGGACTGTACGTCGAACAGGTTATAAGCTGGCGAAACTCCTGCGAGGAGGCAAACGATGGCCAGAGCCTCAAGGTCAGGGAGCTTATGCATGAGGTAAGCCAGGTAA # Questionable array : NO Score: 3.08 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTGGATGTCCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 1118554-1120680 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABTR02000001.1 Dethiosulfovibrio peptidovorans DSM 11002 ctg1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 1118554 31 100.0 34 ............................... CCTTTGGGATATCCATGGTAAGGATGGGGTCCCC 1118619 31 100.0 34 ............................... CCCTCCTCGGGTATGCTACAGGCCCCCGATTTTC 1118684 31 100.0 34 ............................... CTTAAGGAGGCAAGACCCCATGAATAACACGGCA 1118749 31 100.0 34 ............................... TCGAGCTCAAGCGGCTAAGTCTTGGCGATCTCAT 1118814 31 100.0 35 ............................... TTTAATACATAAACCCTCTCAAGATTTCCGGGTAG 1118880 31 100.0 37 ............................... CGAAGATACGCGCGGCATCGGCGGCGTCCATGCCCGA 1118948 31 100.0 36 ............................... CGTCTGGACATTCGGGCTGTATCCCCCGTACCCTGA 1119015 31 100.0 34 ............................... CCCGCTTAGCAGGAGCTTCCCAGTTATCGTCTTG 1119080 31 100.0 34 ............................... CTGATGGCAGCCGAAGCCCCGCGGTCGGTTCCAG 1119145 31 100.0 33 ............................... TCCGACGCCGCCCTGGAACACTCGAACTCGAAG 1119209 31 100.0 34 ............................... CACTCAGGCAGTCCGCCAAACGGACACCGAGAGT 1119274 31 100.0 36 ............................... TGCGGTTGCACATGATAGGGGGTTACGAGGATGCGG 1119341 31 100.0 35 ............................... CTCTCTGTGGAGGAAGATAGACAGGTCCAGCGCGG 1119407 31 100.0 34 ............................... GCCGGAGATGGGGCCACCCTATCGTGGTCACATC 1119472 31 100.0 34 ............................... CCTCGAAAAAGCTGGCCACAAACGACGTGGCCGC 1119537 31 100.0 34 ............................... CCTCGAAAAAGCTGGCCACAAACGACGTGGCCGC 1119602 31 100.0 35 ............................... TTTAAGTGAGAGAGGAAGTCCGAGGCCGCCGCCCG 1119668 31 100.0 34 ............................... GCTCCCTCAGGCGAGGGATGAGGCGAAAAAAATA 1119733 31 100.0 35 ............................... TTATTACGAGAGTTCCAATGTCCTTGCTGCCTCAC 1119799 31 100.0 34 ............................... TCTATCACTTGCCCTTGCCCAGGGATAACTTCTA 1119864 31 100.0 35 ............................... TGATGGCTACAGAGAGGATTTTCGGTCTGTCATGA 1119930 31 100.0 33 ............................... CTTCCGTGGCAAAAAACACCGCTGGATTATAAC 1119994 31 100.0 34 ............................... ACCTGGTACGCAGAAGAGCTGTCTGTACAGACTG 1120059 31 100.0 35 ............................... ATCGATAAGTCCTGCTCGCTTTCCTGCAACCGACA 1120125 31 100.0 36 ............................... CCCAGCCTCAGCCAACGCCTCAGCCCCTGGGCTCAA 1120192 31 100.0 34 ............................... CCGTAGTCGCTGATAGATGCAGGGATCTGATATG 1120257 31 100.0 35 ............................... CCGTAAGAAAAGCTTTTAAGCGCATCGCCCCAGGA 1120323 31 100.0 34 ............................... ATCGTTACAACACGACAGCAAGCGAAGTGATAAT 1120388 31 100.0 35 ............................... TGGTCGAGAGATAAGAGAAAGAAGGAAGGCATTAG 1120454 31 100.0 35 ............................... TCTGATTCTCTCAGGAAGAAAGCAACTCTTATCGT 1120520 31 100.0 34 ............................... AATAGTTGGCTTGCTCTAGCGTCAGCGACACCTC 1120585 31 100.0 34 ............................... AGGACCTCGTACACGTTGTCCGGGGTCATGACTC 1120650 31 87.1 0 .......................GG.A.G.. | ========== ====== ====== ====== =============================== ===================================== ================== 33 31 99.6 35 GTCGCTCCCTCACGGGAGCGTGGATTGAAAC # Left flank : GCCCTCAGTTGGCGGAGAGAACTGGCTTCAGCGATGAGGATGCCGAAGTGATAAAAAGAGTTCTTCCCAAGATTTTCGAGGGTGACGCCTCTTCCGCTAGGCCAGAGGGATCTATGTCTGTCATAAAAGTTCTCTGGTGGGAGCATTCTTCAAAGATGGGAAGCTTTTCCTCAGCAAAAGTGCACGGAACCTTGACGGTGAACCCCGATGGGTCCTATGAAGTAGATTCTTTAGAGGGTATTTCTCTTGAGGAGATAGACGGTTTTTAACGAATCGCGAACTATAAGCGAGCAATGTCGGGAGTTTGGCTGAATTGGTTTGATCTCCCGTAGCTGTCTGTATAAATGTAAAGTTGAGTTGAAAAAGAGGTTCGCGATTCAGAGTTTGCAGTGGTCGGAAGCTTTTTTGCAGAGATTTTAAAGGTCGATAGGCTGAAGTGCTTGGAGATTCGCAAAAAAAGCTCAGTAATCCTGGCGATACGAACGATTGAGAAGGACGCT # Right flank : CACAGATCAAAATAATGGTTAGAAACAAAAAATAGAGGAGGTGATCTCTTGTTTTCCGAGGAAGAGCTCCTTCCAATCTCAGGATTGCAGCATCTAGCTTTTTGCGAACGTCAATGTGCTTTGATTCACTTGGAGCGAGTATGGGAGGAAAACATCTTTACTTCTGAAGGACGGATTCTACATGAAAAGGCTCATACGGAAGAAGTTGAGATCAGAGATGGAATTCGAATTGCTAGATCGTTGCCTTTAAAATCTCTTTCATATGGTTTGGTTGGGATTGCAGATGTGGTGGAATTTCATCCGACCTGTTCTAGAGAGGGGGTACTCTTATCGGGATTGGCTGGTAGGTGGTTCCCCTATTCTGTGGAATATAAGAGAGGGCGTAGAAAAAAGGGCCCCAGCGATAAGATACAGCTTTGCTCACAGGCGTTGTGTCTGGAGGAGATGTTGAATGTGGATATTCCAGAGGGAGCTCTTTTTTACGGTAAAAGTAGAAGGAG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTCACGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.30,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //