Array 1 150529-152204 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIAZ01000030.1 Escherichia coli strain 5-1BK entry30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 150529 29 100.0 32 ............................. CCAGCGACCGCGACATCTCTCTATATCTCCAG 150590 29 100.0 32 ............................. CTCCCGTTTTTGGGTACATTCGTTTTTGATAT 150651 29 100.0 32 ............................. GCGAATGCCCCATCTGTAAACGCCGGGGAAAA 150712 29 100.0 32 ............................. GGATTTTCTTTGGTGGGGAATGCCCGCCGTGT 150773 29 100.0 32 ............................. GCGTTTCCATGCCGTTGATAAACATCCCGCCC 150834 29 100.0 32 ............................. GGTTGCCATCGCTGACGCAACGTCATTAAGGC 150895 29 100.0 32 ............................. GGAATAATTACCGCGCTGATTAAATTAATTAA 150956 29 100.0 32 ............................. GCGGCAGCGCCCGCCGGGTACGACGGCAGCAC 151017 29 100.0 32 ............................. CGCTTTTGCTCAGTAGTGAGTGTGATTTCATC 151078 29 100.0 32 ............................. CAGGTACAGCCGTTTCGGTGTTTTGTTTTTGT 151139 29 100.0 32 ............................. GCGTCGCTGGAAGAACAAAACCGCCTGATCGA 151200 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 151261 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 151322 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 151383 29 100.0 32 ............................. AAAATTCTGTGTTTCGACCATTACTTCGGTAA 151444 29 100.0 32 ............................. ATTCTTGATCACGCTTTTACCGAAGTAATGGT 151505 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 151566 29 100.0 32 ............................. CGGCGTTCCGTGCGGCAATTGGAATCACACCA 151627 29 100.0 32 ............................. CGTTCTGAATCCGATATTCTTCAGCACCTTCA 151688 29 100.0 32 ............................. AGCGTCAATCAGCGCGTCTATCGCGTCACTTT 151749 29 100.0 32 ............................. ATTTGGGGGTATGAGAGCGCCGAGCCGTTCGG 151810 29 100.0 32 ............................. GCTCCCTGTCAGTTGTAATCGATAACGTTGAT 151871 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 151932 29 100.0 32 ............................. CCGAGCCCGATTATCGGCATGAGCGATGCGGA 151993 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 152054 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 152115 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 152176 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTATCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 177907-180377 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIAZ01000030.1 Escherichia coli strain 5-1BK entry30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 177907 29 100.0 32 ............................. GAGAGAGTCCAGTATCAATCCCGCAATCCGCA 177968 29 100.0 32 ............................. CGTACAGTATAACCTCATCCGGGAGCGTCTCA 178029 29 100.0 32 ............................. CCACCCTCAGATCGCCCTTGTACATCATGTAC 178090 29 100.0 32 ............................. CGCACCGGCTGAGCCAGCAACAACAGAAACCG 178151 29 100.0 32 ............................. ATCCGTACCGGCTGCGCCGGGCTTCGGCGGCT 178212 29 100.0 32 ............................. GGCGTGAATGAGGAATTGAACTTTGCATTCAA 178273 29 100.0 32 ............................. AAAGAGTTGGGACTGATCAGTTGCCAGCAGCC 178334 29 96.6 32 ............................T AATGCAGTACGCGCCGGATCCGGTGTTACGTC 178395 29 100.0 32 ............................. CATCCGTTCAAATTCCATCAGATAGCAAACCA 178456 29 100.0 32 ............................. TATTGTTGACTGCTACGAATACGCAGACGAGC 178517 29 100.0 32 ............................. GCGACGATACCTGTGCGAGCTGAATAAAATAA 178578 29 100.0 32 ............................. CTGCGCGACCAACGGGAACAGGGCAAATGTGA 178639 29 100.0 32 ............................. TCGCACTCAATTTCGTCAGTGAACGGGAACCC 178700 29 100.0 32 ............................. ACGCCGAAAACGGTTGGTGCGTATAGCGATAT 178761 29 100.0 32 ............................. CTGTTTCTGGTTTTACCTCCGGCAGCATTTCA 178822 29 100.0 32 ............................. AGAGAGTGGTTTGAAGCCGCTCCCAGGGACGA 178883 29 100.0 32 ............................. CGGAACAACAGGTGCAACTCAGGGCACAGGAA 178944 29 100.0 32 ............................. GGTTATTTATAATCCATTGTTTCCATTACCAG 179005 29 100.0 32 ............................. CTGGTCGCGGCAGGGCGTTCAATTTTAGGGGA 179066 29 100.0 32 ............................. TAATCATTTGGGGCCCCATTAATTAAAAGGAT 179127 29 100.0 32 ............................. GCGCTCACATTTAGCGCCAGAGCCAGGCGGCG 179188 29 100.0 32 ............................. AATTCGGAATCACATTAAAAGGGAACCCGATA 179249 29 100.0 33 ............................. GTTTGAAGGGCGTTTGGAGGAACCCGCGCGTGC 179311 29 100.0 33 ............................. GTTTGAAGGGCGTTTGGAGGAACCCGCGCGTGC 179373 29 100.0 32 ............................. CCTACGCCATGTGGATTAGTCCGGCGTTTCAT 179434 29 100.0 32 ............................. CAGCTCGCAGCGCTCGGAACGTGGCGCTATAG 179495 29 100.0 32 ............................. GTTTCTCATATTTCGCGTCAATCTCCACCAGG 179556 29 100.0 32 ............................. TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC 179617 29 100.0 32 ............................. TTCTCCAATCAGCAGTGCCCATCTGATATGCA 179678 29 100.0 32 ............................. TCAGGGGAATTGCGATATTCAGGCAGCGTAAC 179739 29 100.0 32 ............................. ATCGCTGGTCTGCGAAAACGCGCGCCCGAAGA 179800 29 100.0 32 ............................. ACGAGGTACAGTGGTGCAAAAACAAATTATAG 179861 29 100.0 32 ............................. TTACCGAGCGTCACGAAACAGACAACACCAGG 179922 29 100.0 32 ............................. GCCCAGAATCTCTTTTAGCGCAACGATATTCC 179983 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 180044 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 180105 29 100.0 32 ............................. GAATATCGGGTGCCAGCCTGGACGCTGGCCGA 180166 29 100.0 32 ............................. ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA 180227 29 100.0 32 ............................. GCAAACAGCTAACCACCGCCGGGGCGGTTTCC 180288 29 100.0 32 ............................. CGGCTATGGAATTTATGGAGAAGTTTGGTTTT 180349 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //