Array 1 409818-410274 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NQRX01000001.1 Mycobacteroides abscessus subsp. abscessus strain 2022 2022_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	============================	===================================	==================
    409818	    28	  96.4	    33	.........................A..	GGTTTGGTCGCTCGGCCCGGCCGTGCGCGATGC  	
    409879	    28	  92.9	    33	................T........A..	GCATCTCGGTGATCTGCACCGTCGACGCCGTGA  	
    409940	    28	  89.3	    33	.............CT..........A..	TCCGGTCCAGGTACCGCGTCCAGAAGATGCGGT  	
    410001	    28	  92.9	    34	............T............A..	GGAGCACCTGGCGCTTCACGTTCACGAGGACGAG 	
    410063	    28	 100.0	    34	............................	TGTTGTTCCAACTTTTGCGGAACCCTCTGCAGCG 	
    410125	    28	 100.0	    35	............................	CCGTCGGTGTGGAACCGGCAGAGCCACAATGCCAC	
    410188	    28	  96.4	    31	........................C...	CGGCCGCTGGCTCCGGCACCCGGAAGCCGAG    	
    410247	    27	  85.7	     0	.C...G...C...-..............	|                                  	C [410270]
==========	======	======	======	============================	===================================	==================
         8	    28	  94.2	    33	CTGCTCCCCGCGCAAGCGGGGATGACCC	                                   	       

# Left flank :   TGCTCTCGACGGCAGCCTCGGCGCCCGCGACCGTCGCGCTCGACGTTGCGGGGACCGCGACCGGCTGCCCGGCTACGCCCGTCGAGCAGCCCGACAGCGCCACCGTGGCAGCCGCCGCGGCGGCGATCGCGAACCCGGCCTTCCTGCTCATGCGTTCGATCATCCCAGACTTGACCAAACGAACCGCCGAGACCGGTGTCACGTCCCCCGTCCGGATGTCTTGAGCGGGAGGCTGATTCATCGGCTCGCCACGTCTGCGAGGCGCTGCTCCACGGCGCGGAGGTCGGCCACCGCAGCGGTGAGGTTGGTCTGTTCCATGAGCTCGATCACGCTGTGCAGCCGGGTGCGGGCGCTGTTCACGTCGCAGTGCACTCCGCGGTGCAGGTTCGTGATCGAGTGGCGGTAGTCGGTACCCATGACCGCACGGTGACACGACTCGGGACGGGGTGGTCTACGAGGCGCGGGTACGAGGTGCGCAGTATAGTCCCAGGTCAGTAAGT
# Right flank :  CCCGCTGCCCCCGCAGCGGGGGCGAAGCCGCCCCATTCTCTGTTTTAGAGAACATCTGCGCAGGTAGACGCGGTGCGGGGTTGGCGCGTCCTACTGGCGCGTGTTGGCCGCACGTGGCATGATCTTGATACCGGGTTCGCCCGGCCACCCGCACCGGTTCGCCGGTGCCCTACCCCCCGACCGCTCAGCGGATGCCCCGGGGGACTGGTGTGTCTGCACCGCGGTCGGCCGACCGAAAGGCCTTGACCGGTGACCACTACCACCATCACCACGCCACTGATCGTCGACGGTGTTCCCGTCCTCGAAGTCCCGCCGCGCACCGCCGCGGTGATGAAGTCCGTGTCTGAGCGCTCGATCCTGCGCTGGATCGCCGAGGGGAAGCTGCCCGCGCGCCGTCTCCCCGGCGGTCGCCAGCTCCGCATCGCCGTGGCCGACCTGACCGCGCTCGGCGAGCCCGTCTGACCTACCCCCGACACGCAAAAGGGCCGGCCATCGGCCAG

# Questionable array : NO	 Score: 5.44
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGCTCCCCGCGCAAGCGGGGATGACCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [6-6] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [38.3-33.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.24,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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