Array 1 7816-3920 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBEP01000011.1 Ruminococcus champanellensis 18P13 = JCM 17042, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 7815 32 100.0 35 ................................ TTTGAAAATTTTCATTTATAATACAAGTAGAAAAT 7748 32 100.0 34 ................................ CTGTACAATGCCAACTGCAACCGAGGAAGCCAAG 7682 32 100.0 34 ................................ GATATAATGCCGGAATTATTCCAGATGTCTCCCT 7616 32 100.0 34 ................................ TTTGAAAATTTTCATTTATAATACAAGTAGAAAA 7550 32 100.0 33 ................................ GTAGTATCTGGAAATTGCGCCGGATGGTTGGGC 7485 32 100.0 33 ................................ TACAATTATTTACTCGCTCGCGCTGTGCCTTCG 7420 32 100.0 33 ................................ CCTCCGCCCCGTCTGCAGGGCGGTATTGATAGA 7355 32 100.0 34 ................................ CATCATTGGGAGTATTACCAGTAAACGGCGTTTG 7289 32 100.0 33 ................................ GTTTTCCTCTCTGATAATATTTGTAACCGCCAT 7224 32 100.0 34 ................................ TTGAAAACATGGAGGCAACATATGTAATGGTTTT 7158 32 100.0 35 ................................ TATCGTGTTCCATGTCTGTTAAAGCGAATCCGAAG 7091 32 100.0 34 ................................ TGATAGAAAAAGGAACTGCTACAACTATTCAAAA 7025 32 100.0 36 ................................ TGGCCTATCGAACAGAAGCAAATTTGATTGCTGAAA 6957 32 100.0 37 ................................ TCTTCCTCATAAATTCCATATACGTGAAATTCAGTCC 6888 32 100.0 34 ................................ TTCCGGTGGTGCTGGATGGATGGCTACCAGAAAT 6822 32 100.0 38 ................................ AATTCATGTAGGGGACTACATAATCGAAGACGGAAAAA 6752 32 100.0 34 ................................ TTTTCTTTTGAATGCTGTTTCCGTATTTGTTGTT 6686 32 100.0 36 ................................ TCTTGCAAGAAAAAAATTTAATGAATATATGAAAGC 6618 32 100.0 35 ................................ GACTAAAAAAAGACAATGGCTAAACCAAAAAAGAA 6551 32 100.0 34 ................................ TCTGAAGATAGTGCTGATAGCACACGTTCTGTTC 6485 32 100.0 37 ................................ TTAGTCTTCCAGTTGTAGTAAGTCTTACCCTGCCAAT 6416 32 100.0 35 ................................ GTTTTTTTCGCCTCGTCTCCTCCCACGTCCGTGCT 6349 32 100.0 35 ................................ CCATTATTCGTCTTTTACGCACCAATAGCCATTCG 6282 32 100.0 32 ................................ TTAAATGTTTGAGAATTGGAAAGAAAGAAAGT 6218 32 100.0 34 ................................ TCAAATATTCTTCTTCTTTCCCGACTACGCCTTT 6152 32 100.0 33 ................................ AATGACATATGGGAACATATAGAAGAAAAGGGT 6087 32 100.0 37 ................................ TTGCGCCGGGGGCACCAGCTCCAGCAGCTGTTTGATG 6018 32 100.0 34 ................................ CCAGTATTTGGAGTGCCTGCGTCCGCAGTTTAAA 5952 32 100.0 36 ................................ CCGCCGCCTGCAATCAGGGCGGTGATAGCCATTCCA 5884 32 100.0 35 ................................ CACCGCCTGGTCAGTGTCGCCCAACACGCCCTGCA 5817 32 100.0 34 ................................ TTGTCCTATTCAGAACCCCAAAATAGCGTTAAGA 5751 32 100.0 34 ................................ GATGGCAGAACCAACCATGAAAAGAACCTGCCGG 5685 32 100.0 33 ................................ GAAAGTTCCCACGTCAAGAATTGTATCCTTAAT 5620 32 100.0 33 ................................ TAGTCACATCAGAGCCAACAGAACCCATCTTAA 5555 32 100.0 35 ................................ GGATTATTCCAAAATAAGACACTCTGAAACTGAAA 5488 32 100.0 34 ................................ GTTTGCGTTCTTTTTCCTCTGTTTCAAAACGTTT 5422 32 100.0 34 ................................ TGCCGTTTCGATGGTTGAAGTAACCAACAAGGAA 5356 32 100.0 35 ................................ CTCTGATAATGTTTGTTACTGCCATTCCATACAGG 5289 32 100.0 34 ................................ TTTGGAAATTGGCGTTTTTCAGTGCTTTGTTGAT 5223 32 100.0 37 ................................ TATTTGCAACTGCCATATATACATAATGGATGTTTTC 5154 32 100.0 34 ................................ ACCATTCCATAACCATTTACTGCCAACTGCCAAA 5088 32 100.0 37 ................................ ATCAACTGGAATTCCAAGCGATTCAGATAGTAATGAA 5019 32 100.0 35 ................................ ATCCGCAATGATTCCGAATTTTTAGGGTTATATCC 4952 32 100.0 34 ................................ GAATGTTTACGGGTGAACGCTAAAAGATACACCC 4886 32 100.0 34 ................................ GCAGAAAAGCCTCTGAGGAAAAAGCATTCACTAC 4820 32 100.0 37 ................................ CGACCTGATCGGGGAAGATAACCGGGCGCTGGCGCCT 4751 32 100.0 35 ................................ TTACGATCCCAAAACCCGCACCATCGTCCACACGA 4684 32 100.0 36 ................................ CTGTCGCTGTGACAGCGCAGATTTCCAAGCAGGCAA 4616 32 100.0 34 ................................ CGTCGATCATGTCATCCCGCAGGGCTGACATGGC 4550 32 96.9 34 .....A.......................... GCCAGATAATGGTACTTGGTGACAAAACCAACCA 4484 32 100.0 33 ................................ TAACAGGCTACCACATCCGCCGAAAATTCCCGA 4419 32 100.0 33 ................................ ATTGATGAAATCGGCACTCTGTTCAATTCCCGG 4354 32 100.0 36 ................................ TCACGGGGTTGGGCGGGGAACACCCCGCCCGAGAAG 4286 32 100.0 36 ................................ ACAGTTATATAAATTAAGATAATTTGATATGTTCCC 4218 32 100.0 36 ................................ AAATGCAAAAAAAATCTGAAATGGGGCAAGTTGTCA 4150 32 100.0 34 ................................ TTGCCCGGTGCCGCACAGGTGCAAACCCGTGCGA 4084 32 100.0 34 ................................ ATTCCAGAGGAACACAAGAACGGCGGCATACACG 4018 32 100.0 35 ................................ GGAATTTCTGTTTCCTTTGTATCCCATTGAAACAT 3951 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 59 32 99.9 35 GTCACGCCCTACACGGGCGTGTGAGTTGAAAT # Left flank : CAAGTATGTGCGGGGGGAGATATCTGAGTATCCTTGCTATTTATTAAAGTAGGTGATGGACATGATGGTTTTAGTCAGCTATGATGTATCCACGGTCGATCAAAAGGGAAGGGCTCGTCTGCGGAAGGTTGCAAAAGCATGCCAGAATTACGGACAACGGGTGCAGAATTCCGTGTTTGAAATTGATTTGGACTACGGAACCTTTTGCAGGGTAAAAGAAAAACTGATGCAGTTAATTGATGTGCAAAAGGACAGCCTTCGCTTTTATTATCTCGGAAACAATTGGCACAGACGAGTGGAGCATTTTGGCGCTAAGGATACCTATGATCCGGAAGGCGCATTGATTTTGTGATCTGCGAACTGCCGGTAATTTGATTTTTGTGGGTTGTTCGCAAGGAAATGTCGCATGATTGTGAATAAGCAATGAACAAAATAGCGCTGTTTTGCGCATAAAAGTCTGTCCCGTGTGAGGGTATGACCTTGGAGACACAATATCTAGG # Right flank : TTGAACGTCATACTCTCCATCTTTTAGAAATCCCAGTCACTGTCGCCGGAAATGCAAAACGCAAAAAAAACGACACGCAAAACGCAAAAAAAATAGTAAAAAAAATAGGCGAAATAACCACCGGGGAACTGTATTCTCAGCCCGGGTTATTCGCCTATTTCATTTATACGAATTGTAGTTTTTCGGTACTTCCGGCCGGCCAAAGCATTCCTAGCGCAGAGCAGCTGCTGCACCTCGTCGAAGTCCTCCGGCGGGATTATAACGGGCGTTTTAACGGGCCTTAAACGCCCGTTAAACACCCCATAACCACAGTACACCGGGTTGCGCAGGATCTTGCTGACAGAGTAGGCCGTGAACGGCTTGCCGCGCCGCCCGGTGAATCCGTGCGTGCCACATAGCCGTGCTACATCGGATAGACTTTGGACAATGAGGTACATGTCAAAAATGTACCTCACGGTCTCAGCGGCGATTGGATCAAGCACGAGATCGGCGCCGTCCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCCTACACGGGCGTGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACGCCCACACGGGCGTGGGAGTAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.70,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //