Array 1 154911-154677 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV814775.1 Streptococcus sp. HMSC076H07 Scaffold159, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 154910 36 83.3 30 NNNNNN.............................. TCTCGGGAAATGCAACTGATGCTGCAATAA 154844 36 100.0 30 .................................... AACCTTGATAGGCGTACTGTATGGATTCAA 154778 36 100.0 30 .................................... AGATATTTTTTGATAAATTCTAGAGCAATT 154712 36 83.3 0 ..............................NNNNNN | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 91.7 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : TGTGCTGTTTCGAATGGTTCCAAAACATTAGTCCTGTTGTTATGATGGATGATTATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTGTGCTGTTTCGAATGGTTCCAAAACACAAACCTCTAATGGATAATATAGAACAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCAGGAGATTGTGTGTACTCACGAATTTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACACAATTAAACATAAAGAAGTGCTTATTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTAATAACTGTCCGTTTTGCCATTTCTTGCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCTAGCATGGCACAAAAATAGCGTTGGAATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCTACTGTATTATCTGAAATAGTATCGTTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCTGTGCTGTTTCGAATGGTTCCAAAACGATGGTACAAAATCATTTGTTGGTACTGATGTTTTAAAGCTGTGCTGTTATTATGC # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [6-6] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //