Array 1 1671069-1683017 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046058.1 Microcystis aeruginosa NIES-298 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 1671069 37 100.0 35 ..................................... CTTATTTTGCCAACTTCCCCCCTCTAACCTTGATC 1671141 37 100.0 36 ..................................... TCGATCGCCGGTCGGTCCGGTTCATCGGGGGGAAGG 1671214 37 100.0 39 ..................................... ATGTAAACAATCGAGTAAACGAGTTACTAGCAAGGATTG 1671290 37 100.0 35 ..................................... ATCTAGTTTTTTGGTAATTATGCCTAGTCGTTCGT 1671362 37 100.0 35 ..................................... ACATCCTCGCTGCAGCATGATTGTGGGCAGCACTA 1671434 37 100.0 35 ..................................... TGGGAACCGGGCTGTAAATTTGATGAGGCCTTTGT 1671506 37 100.0 43 ..................................... ATAAACATAGGTAGGGCAGGTAGGGCAGGTAGGGAGAAAGCAT 1671586 37 100.0 33 ..................................... ACTGCCATGACACTTAAATCGATGAGAGGAGGG 1671656 37 100.0 35 ..................................... AAAAAGAAAATAAAAAAAGCTACAAAAAACAAGAA 1671728 37 100.0 35 ..................................... AAGCCTTAAAATTTCATTTAAGATTTCCTGAGATT 1671800 37 100.0 35 ..................................... TTTCAACCAATCGGCCACATCAAAACCTTTTTTAG 1671872 37 100.0 36 ..................................... TACTATTAGGATTGCGAAAAACTTCTTTAATTGATC 1671945 37 100.0 36 ..................................... GCGACCGGGATCGCCTTTTGGACCTTGAAAAACACA 1672018 37 100.0 42 ..................................... CGCCATTTATCGAAGCCGTGGGGATAACCTAATAATTCCAAA 1672097 37 100.0 37 ..................................... ACACATTGGGGACATGAAAACTAGGCAACTATTCCCT 1672171 37 100.0 35 ..................................... TTTCAATCGAGCGAGTATTGCTTGAGTGCTTAGGC 1672243 37 100.0 35 ..................................... AACAGCGCAAAAAGTCCCCACAGACTGCTGCCCAG 1672315 37 100.0 40 ..................................... CCGATCTCTTTAAATCTCACTCTAGCCAAAAATGTGTTCC 1672392 37 100.0 36 ..................................... CCTCTAAAAGCACTTTTTCTCTGTTTACGATAACGA 1672465 37 100.0 40 ..................................... TTAAAATCTTGCCGATTTCTCGCAGCGGATACGGCCGCAC 1672542 37 100.0 34 ..................................... ATTGCTTACATATATTTCGATATAATTCGGCTTG 1672613 37 100.0 34 ..................................... CCTATTGAGGAAGATGAGGAAGACGAAGATGATG 1672684 37 100.0 33 ..................................... GAACTCTAGCGATTGCGAGGACGGCGAAACCGT 1672754 37 100.0 39 ..................................... AAACAACCACTTTAGCAAATTAGGTGATTTACTTAAAGT 1672830 37 100.0 42 ..................................... TATTTAAAGACTTTTCGATCCCTTTAGCAATTTGCGTCCCAA 1672909 37 100.0 34 ..................................... TTTTAGAAATTCATCCTAATCTTGATTAAATCCT 1672980 37 100.0 36 ..................................... ATCCCCTCACCTCTCAGTCCATCCCCTCACCTCTCA 1673053 37 100.0 31 ..................................... TTGATCAATTAAAGTTACTGGATTGTCAGTC 1673121 37 100.0 34 ..................................... CCTTCAAAACTTCGGTTTGAACGCTAGTTAAATA 1673192 37 100.0 35 ..................................... AAGCGAGGGATTTAGGACTTGAGGAAATTGAACAA 1673264 37 100.0 35 ..................................... GAATAGTTGAAGCGCGGGCATCTAAATTAGAGAGG 1673336 37 100.0 35 ..................................... GGAATATCCTGTAGATATGTACTTTTATAAAGAAA 1673408 37 100.0 33 ..................................... ATAAGTTTGGGGTCAATCAGGGCTATTCTAAGT 1673478 37 100.0 36 ..................................... GGGGCATTAAGCAGATATACCCGAACGATGATGATG 1673551 37 100.0 34 ..................................... GATATTCCAGGACAAGCAACGGCGGCGACTTCTT 1673622 37 100.0 35 ..................................... GCGGGAAAGATTAATCAAACTTTGGATAAATACGA 1673694 37 100.0 35 ..................................... TGATCTTAGTGGCACTAAATCAATTCAGGCAAATC 1673766 37 100.0 34 ..................................... AATTTCCAGCACGCGATCGGCAATCACAGACCTG 1673837 37 100.0 33 ..................................... TAATTAAGAGAGTTTTTTAAGTAAATAGGACAA 1673907 37 100.0 34 ..................................... AAAGGCTCAATTAGGCAAAAATCCTTTAGCTAAA 1673978 37 100.0 35 ..................................... GGCTTAGACTACGATGGGCCAAGCATCCCCCTGAA 1674050 37 100.0 34 ..................................... TTTTGGGGAGAATTTAGGATGATTTTATTATAAA 1674121 37 100.0 34 ..................................... CCAATCATCCTCAATCTTAGCGGCCTCCACATAA 1674192 37 100.0 35 ..................................... TCACCTTCACCGCCACCCCCGACAAAGAAAACCAG 1674264 37 100.0 35 ..................................... AATTGGAGAATATCGGTATCTTTGAGGGTGCGCTG 1674336 37 100.0 34 ..................................... GATGAGATGAAGGAGCACTCTAAACAATACGATA 1674407 37 100.0 36 ..................................... ATCTAAGTATCGCCAGACAGCCCATCCTAGAAGCTT 1674480 37 100.0 37 ..................................... AATACCTATTAATATTGTTACGTCCATGCTTTTAAGT 1674554 37 100.0 34 ..................................... TATAGACACAGCTATAGAAGACTATAATCCAATT 1674625 37 100.0 36 ..................................... ATCTATCGCAAAAACTTCGCTGATTTTTCCGCACCA 1674698 37 100.0 38 ..................................... TTGTGCAGAAGAAACTGACTGGAAGTATGTAGCTGGAA 1674773 37 100.0 35 ..................................... AATGCCTTATAGAGGAAAAAAGAAAATAGAGTAAA 1674845 37 100.0 35 ..................................... GCGATCAATCCCGATGGATCAGTGGAATACCAGAT 1674917 37 100.0 35 ..................................... AAGCTTTACAAAAATTAATATTTTTAAATAACCAT 1674989 37 100.0 36 ..................................... CATCGGTGTGACAGGTGTTACACCCGCCAAAACCTT 1675062 37 100.0 38 ..................................... TGAATACTTGCGACTAAATTATTAAGATTAGAAATACT 1675137 37 100.0 34 ..................................... TTTGAGTTGATGGGGACTGAAAATCCTGTAGAAG 1675208 37 100.0 39 ..................................... AGAGATAAAGGTTTTGCCGTAGCTTTTGAAGCGGAACAA 1675284 37 100.0 35 ..................................... TTTGAAGAAATTGGGCAGAGAGTTGTAGAAGGATT 1675356 37 100.0 37 ..................................... AACTTCGGTGACTGGAAGTGCCGAAGCCGGAGCTAAA 1675430 37 100.0 35 ..................................... CTGCCACTGGGCCGGGATTGATTTTCTTGCCTATC 1675502 37 100.0 37 ..................................... AGCTTTAATCCAGCTTCTGCGCTAGATTTTATTAAAA 1675576 37 100.0 35 ..................................... TTGAAGTGGAATCTGGGGAATCCCAAGAAATTATT 1675648 37 100.0 36 ..................................... CGTTACCTCGGTATTTTCTCGGCGGCTTTATTTATT 1675721 37 100.0 35 ..................................... ATGGCCGGCGATCGGAAGGGGTGGAAATGTTCGAC 1675793 37 100.0 33 ..................................... TGTTGAAGAAAAATTAGATTTAGGGATTACCTA 1675863 37 100.0 35 ..................................... CAAAAAAGCAATAAAAGCCATTAGTAACTCGTTTT 1675935 37 94.6 36 .C.....................C............. AACATGAGCAGTAAACCACCGATCAGCTTCCGACTT 1676008 37 94.6 36 .C.....................C............. TTTTATTGCATGGATGCAATCCTTAGAAGCTTGCGG 1676081 37 94.6 40 .C.....................C............. TCCCGGCCCAGCCAAAAATCATCCCATCTCGCTCTACAGG 1676158 37 94.6 35 .C.....................C............. ATAATTTTTAGCGGCCTATCAGGCAATTTTCCCGG 1676230 37 94.6 36 .C.....................C............. GCTGTCTATCTTGCCTAGTTCTTTCCCCTTACCAGT 1676303 37 94.6 35 .C.....................C............. AGAGTAGTAAGGAAAGACGACGGTAACGGCAAAAG 1676375 37 94.6 36 .C.....................C............. ACTCAGTAGGCGAGGTGACAGTCTGTAAGCGCAATT 1676448 37 94.6 35 .C.....................C............. ATTTGATAGCCGATTAAATCGGTCCCGGACTCGAA 1676520 37 94.6 35 .C.....................C............. CTAGTATTCAATCTTTTCATATTGGCTACCTAGCT 1676592 37 94.6 34 .C.....................C............. TTGATAAGGTTCAGGCATCCCTGCTTCCCACATC 1676663 37 94.6 35 .C.....................C............. TAAATTATGCTATCATCCAATTCTGTTTCTGTCAA 1676735 37 94.6 37 .C.....................C............. TGATAGCTCGATCAGTGCTTAAATTTTTGTACATGGG 1676809 37 100.0 34 ..................................... TAACGGGCTTATCCCAAATCGGACGATCCGTAAC 1676880 37 100.0 37 ..................................... AATGGTTTGCGGCGATGCTTCGCTACTTTTTTGATGA 1676954 37 100.0 36 ..................................... ACGACCAAATTTGGCCAGCGCATAGTAATTGATGCA 1677027 37 100.0 42 ..................................... ACAAAGAAAGACGCTTTAGAATCCCTCTATGGACTGTTCCAA 1677106 37 100.0 36 ..................................... AAGTCAAAATGACCTGGAAAAAGTTTTTAACGGACT 1677179 37 94.6 35 .C.....................C............. GGCTGCGGCTGACTTGACAATCGAGCCTGCATTTT 1677251 37 94.6 35 .C.....................C............. TGTCGGTGAAAAGGCTTGCTACATAAGGCTTTCAA 1677323 37 94.6 34 .C.....................C............. GCCATAAGTTTTAAGTGTAGGATAGTATAATATA 1677394 37 94.6 39 .C.....................C............. TACAGTTAGCAAAAGACTGTAAACTTATCAGTACACAAG 1677470 37 94.6 36 .C.....................C............. AAAGGCTTAGGGAACACCAAAAACCAAAGAATAACT 1677543 37 94.6 34 .C.....................C............. TTGTGAATACTGCAATAGCCACAATAGATAGAAT 1677614 37 94.6 33 .C.....................C............. AGGATTGCTAATAAACTCTTGGCGGGCAAAATC 1677684 37 94.6 34 .C.....................C............. TTAGGATCAATCCACCAAGAGATAAAACTAGCTA 1677755 37 94.6 33 .C.....................C............. CATACTTTAACCCCTTCTTTAATCTCGAAATCT 1677825 37 94.6 33 .C.....................C............. CCGTGCCAGTAAACCCATTATCAACAGCCACTT 1677895 37 94.6 36 .C.....................C............. ATAGTCCTTGCTCCTATTGAGTTTCATGCTTTTATT 1677968 37 94.6 34 .C.....................C............. AAGATTTTGAGTTCATCATCTAAATTATCATCTA 1678039 37 94.6 35 .C.....................C............. TTGTATCGCTAAAAAAACGATGCCGGGCAGATGAC 1678111 37 94.6 40 .C.....................C............. GTGAATGCCGGTTATTTCGCATAATTTTGTATTTGCGCTG 1678188 37 94.6 35 .C.....................C............. CCGGCATTGGGGATTCGGATTGCTCCTTGTAAAGA 1678260 37 97.3 40 .......................C............. TGATACGCGTATAAAGCCAATCGGGGCTAGATCGCCTGAT 1678337 37 97.3 35 .......................C............. GCGTGCCATAGTTGTCTATCCGTTGTCTATCTGTC 1678409 37 97.3 36 .......................C............. GATAATGGGTTTACTGGCACAGAACAAGATTGGCTT 1678482 37 97.3 35 .......................C............. AACGTGCCATTCTACTCCTATTGTAGTCCATAAAG 1678554 37 97.3 36 .......................C............. AAAGAAATCCCCAATGATCAGATAGAGTCTTTCCTT 1678627 37 97.3 36 .......................C............. GGTGTACTCAAACGGATACATGGGATTAGTGTAGTA 1678700 37 97.3 35 .......................C............. TTAAATCGTCTAAGGAGAAATCTGAATATTAAAAA 1678772 37 97.3 36 .......................C............. CCGATGCCTGATACCCAATGGGCAGAAATTCCTGTC 1678845 37 97.3 35 .......................C............. AAAACCCCCATTGTATCTGGTAATTTTACTATGAT 1678917 37 97.3 35 .......................C............. AAATTATCGGATGACCTACCTAGCGCGTATGCAAG 1678989 37 97.3 34 .......................C............. ATTAAAGATTTCGCGGCTTCCACATTTGAGCCGA 1679060 37 97.3 35 .......................C............. ATCTTCCTATCGGCCACGGAATCGATCGAGAATTT 1679132 37 97.3 41 .......................C............. GGCCTCATGCCTTTCTCAACGACTGTTGACATTAGAAAAAA 1679210 37 97.3 41 .......................C............. ATCAATATCTTTGCAGTACACCCGCCGTGTATGTGGCGATC 1679288 37 97.3 36 .......................C............. GAGCGATCGCCACCACCCTCTATCTCTCGGCTCAAA 1679361 37 97.3 36 .......................C............. TTTTATAGACAGTGACCTGATTAAAAAGATTTTCTT 1679434 37 97.3 35 .......................C............. AAAGACCTCTAGGAGGGCCTCAAATTCCGTTAAGA 1679506 37 97.3 34 .......................C............. CCCGTTACTCATCCCTTTGCTACCCGCCCGCCTT 1679577 37 97.3 36 .......................C............. CCGGCATTGGGGATTCGGATTGCTCCTTGTAAAGAA 1679650 37 97.3 35 .......................C............. CCGGCATTGGGGATTCGGATTGCTCCTTGTAAAGA 1679722 37 97.3 40 .......................C............. TGATACGCGTATAAAGCCAATCGGGGCTAGATCGCCTGAT 1679799 37 97.3 35 .......................C............. GCGTGCCATAGTTGTCTATCCGTTGTCTATCTGTC 1679871 37 97.3 36 .......................C............. GATAATGGGTTTACTGGCACAGAACAAGATTGGCTT 1679944 37 97.3 35 .......................C............. TATCTGCTAAAAGATTTATAATCTTTATTGGTCTA 1680016 37 97.3 35 .......................C............. GTAGAAAATTGGTAGAGATAAGTAGCCGCGCCACT 1680088 37 97.3 35 .......................C............. CGATAACAAGCCGATTAGCAATAGTTTTAGATGCC 1680160 37 97.3 34 .......................C............. ATCAGTTACCAGCGATTATCAAGTAATTAGGAGT 1680231 37 97.3 34 .......................C............. CATCTAGATCCCGCTCGCAGATAAGAACTGCTGA 1680302 37 97.3 36 .......................C............. AAGTTCCCAAAAATCACAGCCCCAAAACCTTAAAAC 1680375 37 97.3 37 .......................C............. ATTGAAAATATGAGTTCTAAACCGCCCCCACAAAGCC 1680449 37 97.3 32 .......................C............. GAGTAAATCGATGAACCTATCTACTATTAAAA 1680518 37 97.3 39 .......................C............. ATATTCTGGGATGATGATAGTAGAATTAGAATTCTCGAA 1680594 37 97.3 34 .......................C............. ATCTTTTGGTAGCCACTGGCAGATTAAATCTTCT 1680665 37 97.3 35 .......................C............. TTGGCTTTTTGCCAATTCCCCAAAAGCTTGTCTTT 1680737 37 97.3 34 .......................C............. TTAAATCACTATATTCCGATTCACTGGCTAACCG 1680808 37 97.3 35 .......................C............. CTAATATTTCCCGTGTTTTGGATAGAATAAGTGTT 1680880 37 97.3 34 .......................C............. TAATCGATAGCCTATCTGCTCTAATTCACGTTTT 1680951 37 97.3 35 .......................C............. GCGGCGATGCTTAAGGCTTCTCACTTCCAAGAATG 1681023 37 97.3 37 .......................C............. AGTAACCATTGATCATTAATAGGAGTAAAAAATGTCA 1681097 37 97.3 35 .......................C............. TCACTCACCCCGCTTTACTAGCATATCACACTTTC 1681169 37 97.3 33 .......................C............. GCGCCAATTAGGAGGTGGCGATGAATGCAAAAT 1681239 37 97.3 37 .......................C............. TCCCCATTTTCCCATCTGACAATAGTTTTCGGGTAGG 1681313 37 97.3 35 .......................C............. ATCGAAGAGCTACACGCTGAAAAAGAGCGTGATAT 1681385 37 97.3 35 .......................C............. TCGAGTCTTGATTTTTTCCATCTTGATAATCCATT 1681457 37 97.3 35 .......................C............. TTTCCCGGGTTTTCCGTCGTTTCCGGGCTTCCCGT 1681529 37 97.3 38 .......................C............. GGGAATCAGAATATGATGGGAAGGCTCGCCGGGTGTGG 1681604 37 100.0 34 ..................................... TAAGTGCGTCCCCCTTGAGGGGTTTTCCTTTCTC 1681675 37 100.0 42 ..................................... ATCTAACTCATTATCTAGGCTATCATCTGAGTTTTCATCTAG 1681754 37 100.0 34 ..................................... TCAAGGAATAATCAAGCAAATGCCCGGCAGAAAA 1681825 37 100.0 35 ..................................... TAATTGCCTGAACGCTGTATTGCAAGCTCACCAAA 1681897 37 100.0 35 ..................................... CCTTTGGTAACAGTAAAGCCTAAAGCTGTAATAAG 1681969 37 100.0 36 ..................................... CTGCGAATATTTTTATAAGCACCATACATAATATGC 1682042 37 100.0 35 ..................................... GATCTATTTGTTGGTCGGTGATATTCCAATTAAAA 1682114 37 100.0 34 ..................................... TTCATATTTTTGTCCCCATTTGTAAACAAGAATT 1682185 37 100.0 35 ..................................... AGACCAAAGAAGCATTAAGAGGGCATAATCCCTAA 1682257 37 100.0 36 ..................................... AACGATTTCTTTAGAAATCTCTAGGGAGGGTGTAAT 1682330 37 100.0 38 ..................................... TGCCATACTTATACTCCGTATTAGTCTCCGGCTCCCCC 1682405 37 100.0 35 ..................................... TTGGCTAGAGACCCGGCAATTTATATACAAGGGTC 1682477 37 100.0 36 ..................................... TTCGCTCTCAAGCTCTTTAATTCGGTCTTTTAAGCC 1682550 37 100.0 33 ..................................... TATAGAGCGTTAACAATATCTACAAAGTCTGAA 1682620 37 100.0 35 ..................................... CTTGAGTGACAGGATATTTTCCAATCGCGAAAGTT 1682692 37 100.0 37 ..................................... TCCCAATAAAACAATAACCATCCTCTCCATCATCACG 1682766 37 100.0 34 ..................................... GAGCTAGAGAATTTCACTCGCAACCTGGGGGGAG 1682837 37 100.0 35 ..................................... TACTTTGGCACTAAGAACAAGATAAACACTAAAGG 1682909 37 100.0 35 ..................................... ATTATCTTTATATTCTTCATCCCAGTTAACGGTAT 1682981 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 165 37 98.4 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTATCAGTTACGACATTTCCGATGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCCAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGTATCGGTGGTGAGTTACCCCGGGATAATACAATTTTTTTTGTTTAGCTCGGTTGCGCTTCCGGGTAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGAAAAGCTTATGGAATATAGATTCGAGATGATTTTCCTTTCCAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTATGATTGGTTTATTGCGGGTGCGGCGCATACGAACCTTGAAAACCCCATAGCGTATAGCTTTTACCACTGGGCG # Right flank : CTGGAACTTGAAACCTTCTAGTCTATTAATTTCAAAATAAGAATTGCTGTCAGTGAGTTTATCGAACTGCTTGCGTCCAAAATATCCTATAAATTAGAGGAAGTATAAGCTAATTTGTATTGATAGTAAATCTGTTTTTAATAGTATGAGCAACTCTCAATCGCACGCTAAAAACCTTCTCCCTTGTTCCTTCTCCCCACTTCCCCATACCTATTACCTAGCATCATTAGTATTCTATAATACCAATGCTTAGGAAACTATAAAGAAAATCCCAAGATTAGGCGAGTCCCTTGGCGAAAAAGGCTATAGTAGCATAAAATCCGTAATTTTATCTACAAAATTGTTATGACAGTTACCAATAGACAAGAGCTAGAAGAACTGATTCAACAGGTGAAAAAAGCTCAACAACAATTTGCCAACTATAGCCAAGAACAAGTAGATCTTATCTTCAAAAAAGCGGCATTAGCAGCCAACAACGCTCGCATTCCCTTGGCTAAAAT # Questionable array : NO Score: 9.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 2 2001742-2002744 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046058.1 Microcystis aeruginosa NIES-298 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 2001742 36 100.0 37 .................................... TCGTCATAATTAATCTCCTTTTCCTGTTTGTCTATGA 2001815 36 100.0 41 .................................... CAGTTTTCGCAAAAATAAGCCATTTTGTCGTCCGATAAAGT 2001892 36 100.0 37 .................................... CTACTATAATAACCAATGGTTGTAACTAATCGAGGCA 2001965 36 100.0 43 .................................... AAATCTTCTAAAGAAGCTTGGTAATTAGGAGCGCTTCGGGTAC 2002044 36 100.0 36 .................................... CCAAGGGCAGTGCGAAGGCTTTCTCCAAGATTTCCG 2002116 36 100.0 37 .................................... TTTTTTGTAAAGGATTAGAGTCAAATTCTTCGACATA 2002189 36 100.0 35 .................................... TTTAAATCAATAGGAATCTCAAAAGTTGCAGATGT 2002260 36 100.0 38 .................................... CTGATAAAGCTGCGCGATATTAGCCACATATTCAGCCA 2002334 36 100.0 36 .................................... TTGCCCGATCCGATAGCACCTATCCTCGGCCTGGTC 2002406 36 100.0 38 .................................... ACAGAAGCGTAATCACCTGTAACTGATTGCACTTCCCC 2002480 36 100.0 42 .................................... CGACTCTTGAATTCTTTGACCGCTTCCTTGACTAACGCTTCG 2002558 36 100.0 39 .................................... TTGATAAGTTAAAACAGTCCACTCTTTTACTTCTGCTAA 2002633 36 100.0 40 .................................... TTTCAGAGAAAGATAACTCACCATCAGTCTTTAGTTGGTT 2002709 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 14 36 100.0 38 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : TACTTCCGTTAATGCGTTGTGATCTTTCCCCGAATGGTAATTTTCCGAGGGATCGAGGGTTTGATAACCGACTCCGGGGTGTCGGACGAGGGTGGCGATCAGGAGCATAAGTCGCTGGAACTCGCGACTATCTCGTTCACGCAGTGTTCTTTCCCTAGGGGATTTGGGGTGCTGAGTCATACAGATGCAATCGGTTCAGTCAAGGGGAAAGCCGATATAAATTTACTTCACTCCGAGGGCTAGAAAATCCGATCAGGACTGGAAAAATTAGCCGCTCGATCGAGGGGTTAAATTATTGGCTTTTTAGGGTATCATCGACTAGCGACGGATAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACAGGATAAGGGTTTTGTGGTTTATGGGGTTGACGGTGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCCGAACCCCAATCCTGTTCGGACGTTTGCCTACCGGCT # Right flank : CTGAATGGGCTGATCAGTGGGGATTGATAAATATTTCTCGGCCAGATTGCTCTGGGAATACTAATAGTGTCTATGGGAATTTGATCAGCAAGGGATTTAAAAAGCTAAAAATATCTTTCACTCCTTACGATCTCCGGCACTCTTGGGCGCGGCGATCTTTTGATTTCGGCATGGATGTTACCATGTCCTCTAAAATGCTCGGCCATAGTACGAAAATTCACACAGAAATTTATCGCCATTGGATAGATCGAGATTCTTTTAATCGAATCTACCAGCAACTTATTACTCATCCTGATCGCCCTTTACCACCATGCTAAAAGCTAAATATTGGTTCACTTCTGTTTTATTATCAATTATTCTTAATTTAATGTCTTTTATCGCTTACTACATAAGCCAAGCTTTAATGGTAGTATTCGATCCATCTAAAGAATGGATTTTATATTATTTTTCCTCTTTAATCGCGACTTTATTTGTAAATTTTACAATACTCTGTTATTTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 3 2886871-2887272 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046058.1 Microcystis aeruginosa NIES-298 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 2886871 35 100.0 39 ................................... CGTATATTGGATTGGATCCAATACGCTTTTGAGCCAAGA 2886945 35 100.0 40 ................................... TCAAAGAGGCCTTCTGGCGTCCATTTTTGACAAAAAATGC 2887020 35 100.0 37 ................................... GAGTATTGTCCGGTTTGGACGGACTTTACCCCAAATT 2887092 35 97.1 40 ................T.................. GGCTAATTCATCCTCTAGCAAATCCCTCAAATCTTCCCAC 2887167 35 100.0 36 ................................... CCGAAAAGCTTTACAAGCTTTTGGATGGCGGAGCGA 2887238 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================== ================== 6 35 99.5 39 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : GAGGAGGTGTATATTGGTAGCGCCGATTGGATGACGCGGAACCTGACTCGTCGCGTGGAAGCAGTGACACCCATCGATGAACCAGCGATCGCCAAGGAACTAGAAGAAATTCTCGGCATTATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACAAAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGCAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGAGAATTATTATTAATTATGGCTTATTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACGGCCTAGTTTTGCAAAGCTAGT # Right flank : CAGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCGAGATTATGCGTCAGTGGGGACAAAAATTTCAGAGGAACTTTAACCAGACTGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTGGGCATCGTTTATAATAGCCAATTTCCTGGTCCACAACTCAACTCGATCGATCTCGATCGAGTTCTCCACTGGCTACAAACTCCTCATAAGTAGGGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGATAGAAAATCTACGGTTTCACCGATAGGTTACTGCCCGAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGTAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 2889788-2890554 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046058.1 Microcystis aeruginosa NIES-298 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 2889788 35 100.0 33 ................................... TTTTTCGCAATTTCCCCAATCTCCCGAATTCCC 2889856 35 100.0 38 ................................... TCCTGATTGGGTGAGCCGATAGTATCTTTTTCTAGCAC 2889929 35 100.0 37 ................................... GGCTGGATCCTTCACCGTCATTTTCGTCCCCAACAAT 2890001 35 100.0 38 ................................... TGCTGCCCGTCTTGCTTTGAAACCTTTGATCCAGAAGA 2890074 35 100.0 34 ................................... GGAAAGGGCCTTTTTGCGTCACAAACCCAGTCAC 2890143 35 100.0 44 ................................... GTTTTGCATCCAACGCATATCGCCGGAAAAAGACGGCAATGAAC 2890222 35 100.0 38 ................................... CGTTTGGGTAATTGGCATTTAATGCTAAGGTGGCGGGA 2890295 35 100.0 40 ................................... AATGCCTGATAATTAGCTCTCCCGGTCATTTGTAAGGCAT 2890370 35 100.0 41 ................................... AAATTTTAGCTTGCCTAATACGCTTAACTTCGCCATTTATT 2890446 35 100.0 39 ................................... AATGTGTAGGGTTAATTCATGAATTAACCCTACAATTTT 2890520 35 80.0 0 T..AA........A..T......C.....A..... | ========== ====== ====== ====== =================================== ============================================ ================== 11 35 98.2 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : AATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGCTGACAGGGGGACAAGAAGGCTGAAATCGATATATCGTAAGCTTTTCATTGTTTTAGCTCGACAAAGTTTGCCGCACCATCTCTCACTTATTAATAATAATTCCTAGTAAGCTAGCCCCTATCCCTAGTTCTTTCGTTAGCTTTTTGCCTAGAATTGCTAGATCTATTTCTAGTGAGAGAAGCCATAAGCCTTTGTTGGCAAGGTTTCTAGCTCGCTTGTCCCCCTGTCAGAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : CGATGCTTAATTAATAAAAATCAATAAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTAAACAATCGAGTTTTCTATAGCTTTATGTCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCAACCACCGGCCTGAGCAGTACCACCTAATTAGCCCCGGACTCCTAAACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAGTCGATAGCGAAATACAGTCCTCCTCCTCCGAGGAAATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAAT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 5 4154339-4154590 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046058.1 Microcystis aeruginosa NIES-298 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 4154339 36 100.0 36 .................................... ACTTTTGAGATTGACTGGGGAAAGGCTAGGATAACA 4154411 36 100.0 35 .................................... CTGTTTGGGCCCTTAGTGACTGCATGGACCCTAGT 4154482 36 100.0 37 .................................... TCATAATAGCAGGGATCATCTGCTTTGTCGCCACAGG 4154555 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 4 36 100.0 36 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : GTCCTAAGTAGGTAGGCACAATTATTTGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGGGCGAATGCAATTCGCCCCTACAATAATATTATTATGATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGTAGGATGGGTTAGCGGTAGCGTAACATAATCGGGCGTTGGGTTTCATGCTTCAACCCAACCTACGTTCATTTTATATTTAATTCCACCCACCTACTTATAGATATTTCGACAAAATTGAAAGGCAGAAAAAGGGTTTATAAAGAAACCCTTTTTCTA # Right flank : GAGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCACCTGCAAAAAGAGGGTTAAAAAGTGGTTCTGGGGGGGGTAAAATTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACGCACCTCAACCAGAGAATCGGGGTTTTAGGTCGGGGAGGGGGTGCATCGATTTTCAGTCAAGAGTTAGGGGACAAGCTAGATGATGTAGAGATTTGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAACAATCTAGAGACAGCTTCTTCGGAAATCCCATAGAAGCGCACATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTCGATGTGTAATTAATTTTGCTTAAGTAATTATCTGTAATTAAGTAGCTGGTTATAATTAAATTAAAAATGGATTTTAGGTTCGATCCCCCCTGCCCCCCTTGATAAGGGGGGTGCCGATAGGCGGGGG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 6 4162992-4162656 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046058.1 Microcystis aeruginosa NIES-298 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================== ================== 4162991 32 100.0 46 ................................ AGACTACTCGAAACCGTCGAGCCGGATTGGGGAATAGCCTTGATGT 4162913 32 100.0 41 ................................ TGGTGGTTCGATTGTCCATATCGACACCTACGATAAGAAGT 4162840 32 96.9 46 ......................C......... GGTTGCGAAAATTTCAAAGGCACTTGGTTAGAATGGGTGGAATTGC 4162762 32 100.0 41 ................................ GGCGATTACTTGGACAAGCGGACTAAATGAGGGGTTAACGT 4162689 32 75.0 0 ...................T.A....TTTGCT | T,A [4162659,4162668] ========== ====== ====== ====== ================================ ============================================== ================== 5 32 94.4 44 TTCCAACTAATCCTATTTGACCTAATAGGTAA # Left flank : CATTATCAGGGTGATAGAATCAAAGCCCATATCTTTTTGTGTATGTTGGCTTATTATGTGGAATGGCATTTAAAACAGTGCTTGGCTCCTTGGTTATTTGAGGATGAAGAAATTGATGATAGTTCTCTGAATGTGATTAAAGCTAGTCGCAGTGAATCCGCTCAATCTAAAGAGAGAAAAAAACGGAATCAAGAAAACCTCCCTGTGCATAGTTTTCGGACTTTGTTGGAAGACCTGGGGACAATTTGCTTGCATACAGTAGAATGTACGATTAGAGAAGGAAGTTATCGTTTTTCTAAGATAACTTGACCGACTGAACTACAACAATCATGCGTTAGATTTATTAGGGGTTTCCCTAATTTGTACCCAGTAACGGGGCGGCGGAAATTCTTTTAATCCCTCCTACAGCACAGGTTATGGCCTTTTGTCAACAGGGAAGTCCAGTAATAGGTAAGAGATAAGAGTAGGGCTAATTCCGGAATTAGCCCTACTTTTTTAGG # Right flank : TAGGTACTTAACTATAAACGGGATTATTTCGGCCAAAGTTTTTGAAATTTTCCCGCTTGACCATTATTCTCGTCTAGAAAACCTAGAAAATAAGCACAATCATCAGAGTCATCAGGAAAAATTGTTAATAATTCTAGGTATTGATGATTATTTTTGGGATACATTCGATGCCAAAGACAACCAATTTGATCGATACTTCCTGTCACCGAGGTTTTATAGATACTTAAATTATCCAATTTTTGATAGGCTTTGTGAAGCCATTTTATGGCTAGAGAATCATCTTTATCTTCGGCAATTCTTCCCCAAACTTCGACATTTTTAGGATGCCAACTTTCTCGCCAGTTAGCACTATTATCGGGAGTTCTGAGGATATCTTTTTGTAAGGACATCCATTGTTTAGCAATAGTGCGAACATCTTTGATAAAGGGATGAACATGAGTTAAATCTCTGACTTTATTATCGTTGATTAAAGAACTTTTATCCCCCCATTGCCAATGACA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCAACTAATCCTATTTGACCTAATAGGTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //