Array 1 44320-43690 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV802609.1 Streptococcus sp. HMSC075A03 Scaffold12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 44319 36 100.0 30 .................................... TTAGTAAACTACGTAAAATTTAGCGGTAAT 44253 36 100.0 30 .................................... AATTATCAATGTTTACAACTGTTTTAGTTT 44187 36 100.0 30 .................................... AATTTCTAACTGCGTATGACCCTCTTTGTT 44121 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 44055 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 43989 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGTA 43923 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 43857 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 43791 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 43725 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : GTTTCGAATGGTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAACTGATAATCTCAAAAAAGTAAATGTAACGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATTTTTACACGAGTGCTAGAAAACGGGGTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAACTAAAGATATTGACTCCCTGCAGGATAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTCACTTCGTTCAAAATTCACCCCCAAAAA # Right flank : AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 44709-44475 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV802609.1 Streptococcus sp. HMSC075A03 Scaffold12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 44708 36 88.9 30 NNNN................................ AACTGATAATCTCAAAAAAGTAAATGTAAC 44642 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGTA 44576 36 100.0 30 .................................... AAACTAAAGATATTGACTCCCTGCAGGATA 44510 36 83.3 0 ..............................NNNNNN | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 93.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTCTCCACGTTTTCCATCTGTATTTTCTAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTCACTTCGTTCAAAATTCACCCCCAAAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTAGTAAACTACGTAAAATTTAGCGGTAATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAATTATCAATGTTTACAACTGTTTTAGTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAATTTCTAACTGCGTATGACCCTCTTTGTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCAAACTATCTTGATTATAAGTGGACTGATAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTATTTAAGACGTGATTTAATGTTAAAACTGTTTTAGAGCTGTGC # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //