Array 1 602511-603619 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ALED01000027.1 Vibrio cholerae HE-45 strain HE45 vcoHE45.contig.26, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    602511	    28	 100.0	    32	............................	GATTTTATTTTGATCCCGGTTGTCCCCTCTCC	
    602571	    28	 100.0	    32	............................	GTTGACCTTGTTCCGCTCGATGAGAGTGGTCA	
    602631	    28	 100.0	    32	............................	CGAAATCTCAGGTGACCTTCCAGTATGACCAA	
    602691	    28	 100.0	    32	............................	TACCCCAGAGGACACAACATCCCCAATAATGA	
    602751	    28	 100.0	    32	............................	AGCTAGACTCTATTTTCCCGCCTCGGATGCTT	
    602811	    28	 100.0	    32	............................	TATACCCTGCCGATGAGAACGCTAAAGGGCTT	
    602871	    28	 100.0	    32	............................	GTTGGTCTTGAACGCTTTAACGCTCGATGCGA	
    602931	    28	 100.0	    32	............................	TTATTTGCTGCGCTACCGCGCTTTTTAGTTCT	
    602991	    28	 100.0	    32	............................	TTGCGCACCGTTAAGCGCCGCATTACTACACA	
    603051	    28	 100.0	    32	............................	TCCTACTTGTCCAAGCGCCAATGACAGGATCC	
    603111	    28	 100.0	    32	............................	GATTGGCTTAACTCCCTAACGCTGCCCTGCAT	
    603171	    28	 100.0	    32	............................	AAACAGAAGACCAAACCCGAAAGGCGCGCCGC	
    603231	    28	 100.0	    32	............................	TTGATTTGACCCCAGTCGTTAGTGCGGATGCC	
    603291	    28	 100.0	    32	............................	CGCTTGCGAAACAGCCACAACGGCTCACCGTT	
    603351	    28	 100.0	    32	............................	AATATTCTGTGTTGGTGGAATACCTAGCATTT	
    603411	    28	 100.0	    32	............................	ATTGGCGTTAAATAGTGGGTTCATTATTTTTC	
    603471	    28	 100.0	    32	............................	AATACCTGCATTTTGTTCATGTCTAATTTGTA	
    603531	    28	 100.0	    32	............................	TACAGAGAAAAGAATCCCCAACGGACAAGGGT	
    603591	    28	  92.9	     0	......................G.A...	|                               	T [603611]
==========	======	======	======	============================	================================	==================
        19	    28	  99.6	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                	       

# Left flank :   AAGCTTATTGAATGATCTACAAGGTTTATGCTGGTTAGGGCCTCTCAGCGGTTATTGCCAAATCAGTGAAGTGTTAAGCGTTCCTGAGCAAGTTCAATACCGGGTGATCTCAGCTAAGCGCCGTAATTTAAGTGCTGCGAAGCTGCGCCGTTTAATTGCACGAGGGAGTATAAATAAAGAAGGTGAGCAGCGTTATAAAAAGAAGATGCTGAATCAGAGTATTAAAGGTCCATATCTTGACTTACTCAGTAGCTCGACAGGACAAAAATATCGTAAATTCTTTGAATTTGGTGAAATTCAGGACGTGCCTGTACTTGGAAATTTTGATACCTATGGACTAAGTCTTAAGGCAACAGTACCTTGGTTTTAACCCTATTTTTTCGCTCTTTAAAAATATGCCTAAAATACAATGAGTTACAATAGGTGTTTTTTAACAAGGTAAAAATACAATTTTTACCTTAACTGACTGTTGTAACTTACTTTTATAGATTTATTCTATA
# Right flank :  ATCTTTATATATCTTATTTTTGCAGATCTCAAAAGTTGGGATTATATAAATGACAGTTTGCTTTGAGATTTCCCGCTTACTGGCTGTATATCCGAAATTGTGGTAGCGTTTCCCACACTAACACCAGTCTATTAATTAAGCCGCTGCCCTTCGGGGTGGCGGTTTTTTTATGCCTGAAATTTGGAGCCGCACATGCAAGACAAGAAGTTATTGGGCGATGAACTCTCACTAAAATCGACCATTAATGCCTCTACGGATATGAGTCAGTCTGCCTTTTTACCGAAAGGCTTTCAGTTTGAAGCCCCTAAAGCGCCGCAACGTAACTACGATGTGACGTTAGGAGATACCGCTAAAGCCGTCGGTAGTGGCGCTCTGCGTTCACTGGCTGGCCTTGGTGAACTCTCGGAGAACTTCCTTGGTGTGGGTGAGGGCTTTCGAGATTTGATGTCCTCTGGCTCGGATTCTCTGCAAGAGAGTATGACTCAAGATGGCCGCGAAGC

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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