Array 1 6093236-6097297 **** Predicted by CRISPRDetect 2.4 *** >NC_011768.1 Desulfatibacillum aliphaticivorans, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 6093236 28 100.0 33 ............................ TAAACATGCAGCCCAGATTAAGCTTTGACACGG 6093297 28 100.0 33 ............................ TATCGCTTAGCGCCTCCAACGGGTACGGGGGTT 6093358 28 100.0 33 ............................ CCAGGCAGTGACCGCCGGGACTGTTGTCATTCG 6093419 28 100.0 33 ............................ CCTGCTGTCACCCTTGTTTAGGTTTAAGGGGCT 6093480 28 100.0 34 ............................ TGCTTTTCCTCGGAGTTTAAAGGGGCTTTTGACG 6093542 28 100.0 33 ............................ TATTCCGTGCATGACACAATGGATAGAAAGAAA 6093603 28 100.0 33 ............................ TCCTGCTTCCCGTGCCGCGTCGAGCACGCGTTG 6093664 28 100.0 33 ............................ TACAACTTCTTTCCACATATAACTATTTCGTCT 6093725 28 100.0 33 ............................ TGTCAGGCGGTTTTTGGCGGCGGTTCACGAGCT 6093786 28 100.0 33 ............................ TCATCCGCGCCATAGCCGAGCATGTGGTTTTTG 6093847 28 100.0 33 ............................ TTGCTTCCGGCTTAGGGAGTCTGGCAAAGGATA 6093908 28 100.0 33 ............................ TTGCGGATGGATTGGCTACGCGGTCCCCCGGGG 6093969 28 100.0 33 ............................ TATGGTTGTGAAACAGTTGATGAAGCAGTTCAG 6094030 28 100.0 34 ............................ TCCTTTATAGGTTCCAAGACCACGGATAAAATGG 6094092 28 100.0 33 ............................ TATTGTAGGAATCTAAAAGGGTAGCGGCTCCGA 6094153 28 100.0 33 ............................ TGGAGCATGTGGTGGAGGTTCAGGTGGGAGTGG 6094214 28 100.0 33 ............................ TTCTCAAGATCAGCACGGAAATGATCCAGGAAA 6094275 28 100.0 33 ............................ TCCGGCACGGATTCCATCAGCGGGACCACCCTG 6094336 28 100.0 33 ............................ CCTTTTGCATCTGCTCTACAATGGGTGGGCGTA 6094397 28 100.0 33 ............................ TCAGCTTCTTTGAATCGCTAACTGAGGTAATTG 6094458 28 100.0 33 ............................ TGACGTATTCGGCGGCCCAGCCATTAAGCCAGT 6094519 28 100.0 33 ............................ TGGTGCGAGTCCCCGAGCCACAGATTCCAGGGT 6094580 28 100.0 33 ............................ TAGATGACGTAGATCACGCCCCCCTTTGATTTG 6094641 28 100.0 33 ............................ TACGACATTGATGCGGGGTTTGTAGCCCATGAG 6094702 28 100.0 33 ............................ TCTTTGAACAAACTAACTTTATGGAGGAAAACA 6094763 28 100.0 33 ............................ TGAAAAAGACTTTTTTATTGATCGCATTATGCC 6094824 28 100.0 33 ............................ CCCCTCCAGGAGGAAAAGAAGAAGGCCAAAGGC 6094885 28 100.0 33 ............................ CATAGTTTGTTTTTACTGGGGCAAGTGGTGTGG 6094946 28 100.0 33 ............................ TCATTTCGAGTTTGTGAAAGAGTTCTTGGCTTC 6095007 28 100.0 33 ............................ TTTGTTCAATTGTGCTATCGAGTTTTTCCCAGG 6095068 28 100.0 33 ............................ ATATATCAAACAACTTTTATCAGGAACACTGGG 6095129 28 100.0 33 ............................ TTCCTGAAAGAAGCCGAACTCAGTCCTGATGGC 6095190 28 100.0 33 ............................ CAAAGCATAGATCGTGTCTGAACCGGTTGCAGA 6095251 28 100.0 33 ............................ TTCCTATACCGCCAAGCTGGACGGTGAAGCCCT 6095312 28 100.0 33 ............................ TCAGGCTGGCCTGGGCGCTTGGGTATCTGGGTT 6095373 28 100.0 33 ............................ TAGTCCCGTCCAAAAGCATTGATCCCCGTTGCA 6095434 28 100.0 33 ............................ TTTGGGTTGATCTCCCCGTTCTCGCCGTCCCTG 6095495 28 100.0 33 ............................ TATATGTGTAGCAAAAACGCTTACGGGACCGGG 6095556 28 100.0 33 ............................ TCTCTTTCAGGGGATCGCATGTCGCCTCTTTAA 6095617 28 100.0 33 ............................ TGTGTCCTCTCCAAGCCTTAGCGAACTTGCGCT 6095678 28 100.0 34 ............................ TAGGGAAAACCACGGACGGCATACACAGGCTTAA 6095740 28 100.0 33 ............................ TCTTGCAGGACAGATGGAGGACATCCTGATATG 6095801 28 100.0 34 ............................ TGGCCTTGGGCGAATGTCCGTCATGTGATCCTCA 6095863 28 100.0 33 ............................ TCACTTCGTCCCCATCCTCGCCCATGAGGGTGT 6095924 28 100.0 34 ............................ CCCTGGGCGAGGCCGTGGACTCCATGTTCAAGGA 6095986 28 100.0 33 ............................ CATGGCGGCCATCAACGCGGCGGCGACGCCTGC 6096047 28 100.0 34 ............................ TTCGATTTGCTGGTTCATGGTTTCCACCCAATCG 6096109 28 100.0 33 ............................ TATGTCCTACAGCGCCAACATCAACCTGAAGGA 6096170 28 100.0 33 ............................ CCTATTCAAGATTAGGCATATCTTCGGGGGGAT 6096231 28 100.0 33 ............................ TGGGAGTGGTGACGGAATTGTCGGGGATGTATT 6096292 28 100.0 33 ............................ CCATTTTCAGGCACCATGCTAAAAGCCCCGTGT 6096353 28 100.0 33 ............................ TTTTATTTTGGCGGTCGCGTTTGGGTTAAAAAA 6096414 28 100.0 33 ............................ TCCGTGCTCCACTTTTAGAGTGACCGCCCGATT 6096475 28 100.0 34 ............................ TGACGGGCGAGGCCGGGTTAAGCTCCGGCTATCG 6096537 28 100.0 34 ............................ TGGGAGTATATTGGAGTCAAGATCAAGGCAGGGA 6096599 28 100.0 33 ............................ TTCTCAGGCATTTTATTCTCAGCGTTTATGTGC 6096660 28 100.0 33 ............................ TTTGTGATAGTTATAGAAGCAGAAAACGGGGAA 6096721 28 100.0 33 ............................ CACCTGTCCAGGCTTGTGAGTACGGACGATCTT 6096782 28 100.0 33 ............................ TCTTCACTTGCTCCAACTGTGAACAGTGCAAAG 6096843 28 100.0 33 ............................ TGCGGATCCTGCTGTTATCTCGCAGGCATACGA 6096904 28 100.0 33 ............................ CGTCGACTACAGTGCCGTCAATGGCCTTTGGCT 6096965 28 100.0 33 ............................ CGTTCCCGAAAGCGGTGGCGTTGTTTTCGGCTC 6097026 28 100.0 33 ............................ CGGATGCGGCGAGCCGGTAAAAGCCGCCGGTCT 6097087 28 100.0 33 ............................ TATGCGCAAATGCCTCCCTCTGTATGGGGGGAG 6097148 28 100.0 33 ............................ TCCACCCAAGGGGGACCGGAAGCCTGGAAGTGA 6097209 28 100.0 34 ............................ TTGTTTTGAGCAATGGGCCGCTGCGCCGTTTTCG 6097271 27 89.3 0 .................-........GT | ========== ====== ====== ====== ============================ ================================== ================== 67 28 99.8 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : AAAAGGACCTCTGCATTGACCTGGCTTTTGCGTTGACCCTGGAAATGGGAGGAAGATATAATAAACACACCGTGTCCGAAGCCTTCCGCTCCAGAGTCGTTGCCATAGACCTCCTGGACCGCATCGCCAAGGACATCCAACACGTCCTGTATGGAGATTAAAATGCTTGTCGCCGTCGCAAACCACCTGCCTCCGGCCGTCCGGGGCCGCATGAAACTCTGGTTCGTGGAGCCCAGGCCAAACGTTTTCGTCTCCGGCGTCAAAGACTCCGTGGCGGACGGAGTCGTGAAATACCTGCTGGACCACTGCCCGCCGGAATCCGGGCTCATTCTGTTCCAGCGTTCCAATAAGCCGCCGGGCTACAAAATCCGCGGGCTGGGCGATCATACCAGAGCCCTGGTGGAAATCAGCGGCCTGCAATTGGTGCAGGAAAAAAATGGCCTCTTGGCAAAATAGCAAGATGTTGTTACTGGGATAACAAACGCCGACAAGATGTTGGT # Right flank : TGGGCTTTGACGGGGTGGCCAACCTGCAGAAAATGCCCAAGGAGGTCATCACCACCCTCAAGACCTACTGCGAGTCGGGAACCTTTCAGCGGGGCAAGGATGCGGACAGCAGCAATGCCAGCATCGTCATGTTCGGCAACACCAATCAGCCCGTGTATGTCATGGTGCAGACCGGGCATCTCTTTGCTCCCATGCCGGACGTAATCCGGGACGACATGGCTTTTATCGACCGGCTGCATTTTTATCTGCCAGGCTGGGAAATTCTCAAGATGCGGGTGGAACTGTTCACCAAGCATTACGGATTCGTGGTGGATTACCTCGCAGAGGCCCTGAGAGCCCTCAGGAAGCATAATTTCACCGAGGTCATAGACAAGCACTTCTCCCTGGGGTCGCACCTTAACGCACGGGACAGGAAGGCTGTGAGGAAAACCGTTTCCGGCCCTATGAAAATTATTTATCCGAACGGGGAAGCCACTGCCGAGGAAATGAAGTAAATCCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //