Array 1 43460-45196 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGU010000147.1 Klebsiella spallanzanii isolate SB6419, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 43460 29 100.0 32 ............................. CCCAGAACACCATGAAGGCGAGCGAGTTCGTA 43521 29 96.6 32 ............................C GCAGAACATGAGGGCGGGCTTTCAGCAAGAGC 43582 29 100.0 32 ............................. TAACAGTCAGTGCCAGATAGATAACAGCGCCC 43643 29 100.0 32 ............................. CCAGTATCATCGGCATGAATAACCAGATATCG 43704 29 100.0 32 ............................. CGGCTTCAATCTGGCGCTGAAAGGCGGTTTTC 43765 29 100.0 32 ............................. TCAATGCGCTGCCCGCGAGCTGTCAGACAGGC 43826 29 100.0 32 ............................. CTCCGCTCGACTCACTCACTCAAGCTGGCGTC 43887 29 100.0 32 ............................. AAATACTGTGACGAGCACATTGGTCGCAACGC 43948 29 100.0 32 ............................. CCTTGCGTTTCTCCACCTCTGCATTCCAGTTG 44009 29 100.0 32 ............................. TTTTAAAAATGTGGGCTAATGCTCCTTTAGGC 44070 29 100.0 32 ............................. GCACCTTCGTCAGCATCAGGGTCGACCATCGT 44131 29 100.0 32 ............................. GATCAGCGGGATGGGCAGACGGACGATCTGGT 44192 29 100.0 32 ............................. GGGCTTAACCATGTATACCGCTAATTACGAAA 44253 29 100.0 32 ............................. AATATCGGAGCCGCCCAGTCCAGCATCGTTAA G [44275] 44315 29 100.0 32 ............................. CCTGTAACGGCAATTGTAACTCAGTTACTCAA 44376 29 100.0 32 ............................. CGCCGAATGATATTAACGCGAATCTTAACAAC 44437 29 100.0 32 ............................. CCGGTGCGGCGGTTCGTCTTGTCGCCGTCCTG 44498 29 100.0 32 ............................. TTTGTGCTGCTCAGCACGGATATCACTGAATA 44559 29 100.0 32 ............................. TTTGTGCTGCTCAGCACGGATATCACTGAATA 44620 29 100.0 32 ............................. GCGTGGACCACTCGGAGTCGAAATAATAAATC 44681 29 100.0 32 ............................. CAACTGGTTTATCGGTCTGTGGTTCTGCTTCT 44742 29 100.0 32 ............................. ATATTGAAAATTATGAAATTGACCATGTAAAT 44803 29 100.0 32 ............................. CACGCACTAAGCTATGACCACTGCCAGCGCTG 44864 28 96.6 32 .....................-....... CCCGACATTATATCGGTGAGCGCGAAATAAAA 44924 29 100.0 32 ............................. TATTCGAAATTGTTCAGGCCATGTCGGGGCAG 44985 29 93.1 32 .....................A.G..... ATGATCGGGATAATTTACGTTCTGAACTTTGA 45046 29 82.8 32 G...........T........A.G..T.. CCATAACTGTGGGGATGGCTTGCGGGAAAAGC 45107 29 79.3 32 .C..........TG..T....A.G..... ATCAATAGAGGTTGCGGCTGTCAATTTTCATG 45168 29 72.4 0 .C.......A..GG..T....A.G...A. | ========== ====== ====== ====== ============================= ================================ ================== 29 29 97.3 32 ATGTTCCCCGCGCCAGCGGGGGTAAACCG # Left flank : GAGATATTGCGGTGTTCTCAAAGGGCAATATTCAGCGTCTGGTTGGCGCGCTGGCAGAGAGCCATCGCCTGACGCTGAATACACGCTATCAGGTTGATTATATTGAAACCCTTTATGGTCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACTACTCACCTTCAGGATCCTGCTTTGAAGATTGCCCAGCTTCAGCAGCCTGCTTTAACGCGTACCGTCGCGCTGATGCGCGGGCCTCAGCCTCTGCCGCCGCTAATTGAAGAGTGCTTCTCTTTATTGCTAAGTTCACTGCGGGAAGTGAGTCTGTAGGGGACCATTGCTTTCATAGTTTGTTTTGGTGAATTGAGATAGAGTTAACGGAATGCTTTATCGTGCCTTTTAAAATCAAAGAGTTATCGCTCTTTAATAAAATCAATTTGTTGCAAAAATGTCGGTAGATTGTTTTATGTGAAAAAAATCATTATAAAACAAAAAGGTATGTTTAGT # Right flank : GCATGTAGCATTACAGGCTTTACGCATCATGGCGCTATTGTGGGTCGATTAAATTCACCAGCTTTGTCACAACTTCGCAAATCAGCGCTTCATCTGCGGCAGCATAGAACTTAGCGTCACGCGCAATCAGGTCCACGGCTTTTAGCTGGTGACAGAGAACGACGCCGCGCAGGTTACCGTTATCAGTATCGTGTGGTAACACGTTGACTGTCACTCCCTCAGAGCGCGCAGCGTTCGCGCCGGTCGAGATAGGGCAACACATTGCGACTTTCAGCGCCCTGTTTAGCGCCTGGTCAGTAACAACGATACAGTAATGAGGGCCGCTCAGCTCGTGACCGGCGACTGGGTCCGGGTTAAAGTGCCAGATTTCTCCGCGGTGTGGCGTCCTTGCCTTTACCATGCCTCATTCCCCTGTTTCCCATTTGCCCAGCTGTCGACCGCGTTGTTCAGCTCGGCGATCTCCTTCTCGTCAATCTGCCCTAGCAACTGAGCGACAGTGA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCGCCAGCGGGGGTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ATGTTCCCCGCGCCAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1808-132 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGU010000123.1 Klebsiella spallanzanii isolate SB6419, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1807 29 100.0 32 ............................. AATAACGAATTAACAGCAGCACTGGCGACTAT 1746 29 100.0 32 ............................. CCGCTGCAGATCTTCGCGCCGCCACGGTAGCT 1685 29 100.0 32 ............................. CCGGGAGACTCTGCCATGACCGGGACGCGGAC 1624 29 100.0 32 ............................. ACCACTCGGTTGACCTGGTGATGGTGGATAAC 1563 29 100.0 32 ............................. ACAAACCAACTTTCTCGCGGTATCCGCAACAA 1502 29 100.0 32 ............................. AAATCTGGGCGCAGATTGTCTGGTTGCCGGAA 1441 29 100.0 32 ............................. CCACTCTGTTCTGCCAGCCAGACACCGATATT 1380 29 100.0 32 ............................. ATTAACGGTGGCTTCAAAGTGGTTATCTTCAA 1319 29 100.0 32 ............................. GCTGTGCTTGGGTTTGCGGCGGTAGGCGCAAC 1258 29 100.0 32 ............................. TGCGCGGGAGCCGACGTTGTAGGCGAACGATA 1197 29 100.0 32 ............................. TGTATAGCCGCGTGGAGTACATGGTGCATGGT 1136 29 100.0 32 ............................. AGGGAAAGAGCACGTGGCCGCTGTGTCGTAGA 1075 29 100.0 32 ............................. GGTTTCGCTGAATGAACCGCTTTTTGGCTGCG 1014 29 100.0 32 ............................. AGCAGCATTGCCGTTCATCCTGAACCCGCCGC 953 29 100.0 32 ............................. TCTGTTTCTTTGCTGAACTCGACCGCGATCTG 892 29 100.0 32 ............................. CTGGTTGGCCTCTGCGATGGAATTGAATATGT 831 29 100.0 32 ............................. CGTCTTTTTGTTGTAGCAAACTTGAGCTAGCC 770 29 100.0 32 ............................. GCCATTTACAAATGGATTGAGCGAGGTTCTCT 709 29 100.0 32 ............................. CCCAGCGCCCCCACGCATTGAGCATATGTGAA 648 29 100.0 32 ............................. ACTGGTTGGAAAAAGAAGTGACTATTACTGAT 587 29 100.0 32 ............................. ATGGACGCACTAAAGCAACGCATCATCGACTT 526 29 100.0 32 ............................. CATCGAGAACGTACACCGGAATGCAGCCGAGA 465 29 100.0 32 ............................. CCATTGAGTCGCGTCCATGTTTCCGCGTAGTG 404 29 100.0 32 ............................. GCTTCAACTTCCGAGGAATTGACCAGGTCTAC 343 29 100.0 32 ............................. ATGTAGGTGGCTGGGTAGACGGTGAATGTGTT 282 29 100.0 32 ............................. GCAAATCCAGCCGTGCCGGGTCCTGCTTACCA 221 29 100.0 32 ............................. CTGTTCGTCATTATCGGTGTAATTCTCCAGCG 160 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 28 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCTGCCGGAGAGATTGAACCGCCTCAGCCTGCGCCGGATATGCTGCCGCCAGCGATACCGGAGCCTGAATCACTGGGGGATAGCGGTCATCGGGGGCATGGTTAATGAGTATGGTGGTTGTGGTTACGGAAAATGTACCGCCGCGTCTGCGGGGCCGCCTTGCCGTCTGGTTACTGGAGATTCGAGCTGGTGTGTATGTTGGTGATATCTCAAAACGTGTACGGGAGATGATCTGGCAGCAAATTACACAACTGGCAGGCGTCGGAAACGCTGTGATGGCTTGGGCTACGAATACAGAGTCCGGTTTTGAATTCCAAACTTGGGGTGAAAATCGACGTATTCCGGTAGATTTGGATGGGCTGCGATTGGTTTCTTTTCTTCCCGTTGAAAATCAGTAAGTTACACGTTCTTTAATAAAGAGGAATTGTTGATTATAAGTTGGTAGATTGTTTCTTGCTAAAAATTGTAATATAAAACAGATAGATATGTTTAGT # Right flank : GTAAGCGTCTAGCCACTGCCGCCTGTGAATCTGGTTACGGGATCGTTAGCTTAGAGCTCCATCTAATTTAGAAGGAGCTCTAATCATGGAAAATACTGCCAACTGGCGAACTGAATCCCGCACAGTCTATTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 31365-29933 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGU010000123.1 Klebsiella spallanzanii isolate SB6419, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 31364 29 100.0 32 ............................. CTGGCCCAGTAACTCCCCCCTCTCTTTCAAAA 31303 29 100.0 32 ............................. TGAACGAGATGATTTTCTACCGGAAAGGATGC 31242 29 100.0 32 ............................. CAGCTTGATAGCGGTATATGGGTATTTGATAG 31181 29 100.0 32 ............................. TTTGTCCCGATCAACTCCAATCTCGTCATGTG 31120 29 100.0 32 ............................. TGAACGAGATGATTTTCTACCGGAAAGGATGC 31059 29 100.0 32 ............................. CAGCTTGATAGCGGTATATGGGTATTTGATAG 30998 29 100.0 32 ............................. TTTGTCCCGATCAACTCCAATCTCGTCATGTG 30937 29 100.0 32 ............................. GAAGTGAGGCTGATTTCTTTGGCGCGCCGGAA 30876 29 100.0 32 ............................. GCTTTTTGATGTATCGACGGGCGGTAGCGTAG 30815 29 100.0 32 ............................. TCGACGGGCGTAGGCCACCCTTCTTTCGCAAC 30754 29 100.0 32 ............................. TGAACGAGATGATTTTCTACCGGAAAGGATGC 30693 29 100.0 32 ............................. CAGCTTGATAGCGGTATATGGGTATTTGATAG 30632 29 100.0 32 ............................. TTTGTCCCGATCAACTCCAATCTCGTCATGTG 30571 29 100.0 32 ............................. GAAGTGAGGCTGATTTCTTTGGCGCGCCGGAA 30510 29 100.0 32 ............................. GCTTTTTGATGTATCGACGGGCGGTAGCGTAG 30449 29 100.0 32 ............................. TCGACGGGCGTAGGCCACCCTTCTTTCGCAAC 30388 29 100.0 32 ............................. CCACGCAAACTGGTTATGTATATGTCAGGGTG 30327 29 100.0 32 ............................. GAGCCGCCGCAGCTGTAGCAGTGGAGTGTTTC 30266 29 96.6 32 ............................A CTATTGCGGGACCGTACCGATAACCCGCATCC 30205 29 100.0 32 ............................. TCTTGATGTTTATTTGATTTTTCTACCATAGG 30144 29 100.0 32 ............................. CGGCTGGCTTCGACCCGATCCTGGAGGTCCAC 30083 29 100.0 32 ............................. GCCACTGAGCTGGACATGTTATCAATGATCAT 30022 29 100.0 32 ............................. TCTACGATGCAGACACAGTCGTGTTTGAAGTA 29961 29 96.6 0 .............G............... | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGTGCGGGATTCAGTTCGCCAGTTGGCAGTATTTTCCATGATTAGAGCTCCTTCTAAATTAGATGGAGCTCTAAGCTAACGATCCCGTAACCAGATTCACAGGCGGCAGTGGCTAGACGCTTAC # Right flank : GTATCACTACCAACGCCCGGATGCACCGCCTCCCCCTGAAGAGCCGCCGCCGCCGCGAAAACCGCCGCCGGACGATGAGCCCGAAGAACCTCCGCCCCCGCCAGACTTAAATCCGCCGCTGAGGACAATAATGACAATGACCACGACGGTGAGAAGAAATTCTGCGAAGCGGCTTGCGGCATTTTTCAGCCATTCGATATCCAGGTAAATGAGCAGGACGATTAATGCAGCAACGACGGAGAAAGCCAATACGATAAGCACTGTCTTTTTCCTGTTTTTGGAGACTTCAGGTGAGTCCAGACCCGATGACGATTTGTGATGTTTTTTTCCTGCTTTGGATGATGCCTTCTTCTTTTTGCCCTTTGCGCCGCCGGTGATTGATGTGATTAACATGCGGCCGCTAACGACAATATTCTTCAGTCGGGACCACAATGGCAAGGTTATCAACAGACTTAAGCTAATGTTCCCGACCTGGTGAATGATAACGTCTTCCCGCAGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2331-167 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGU010000057.1 Klebsiella spallanzanii isolate SB6419, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2330 29 100.0 32 ............................. GTCTTCTTCGGCGGTATCGAAGTTGGTCTGGT 2269 29 100.0 32 ............................. AGGCGAATCGTTTTGTCACGTACGCCCCGAAA 2208 29 100.0 32 ............................. TCAAACGCGAAACGAAGGTACAGGTACTTTGT 2147 29 100.0 32 ............................. GACAATATGGAGAAGAAGGATAAGCTGCTGTT 2086 29 100.0 31 ............................. GGGATATCCACTATTCCGACATGGCTGGCGC 2026 29 100.0 32 ............................. ACTATACGCCCGTGTTGTTCGGGCACCAGGAG 1965 29 100.0 32 ............................. ACAAGAATTTATATTGATGGTAAAGAAATTGC 1904 29 100.0 32 ............................. GACGGCTGGATCAATCAGATAAAAGCGCTGGT 1843 29 100.0 32 ............................. GCTGGCCGTCAGCTCCGCCAGTTCCCTGACCA 1782 29 100.0 32 ............................. AACTGGATGTGGTGCTGTATGTGCCCGACCCG 1721 29 100.0 32 ............................. CTGGCGTGCGTCCAGGCGATTATCGAGCTAAC 1660 29 100.0 32 ............................. CAATTGGTCTTGCTATTCGCACTTTGCCAGAC 1599 29 100.0 32 ............................. AGAACTCCCCCGCAGCACCATTTGCAGAAATC 1538 29 100.0 32 ............................. ACCGTTGCGATCCCGCGATCTATACGGTTTGC 1477 29 100.0 32 ............................. GCCAACCAGATAGTCATTCGACTTCAGCAGAT 1416 29 100.0 32 ............................. CCTATCGAAATCAATATTCCTGACCTGGTGCA 1355 29 100.0 32 ............................. AGTGTTGCTATAGCGGCAACGGAGGGCACAGA 1294 29 100.0 32 ............................. CAGGCGGCGATTGACGCTGGCACGGATCCGGC 1233 29 96.6 32 ............................T GGTGGAGGGGGCGTTATAACGTGCTGTGTACT 1172 29 100.0 32 ............................. TTATATTTAACCGTGATCCCATCTTTCAGGAT 1111 29 100.0 32 ............................. TCGGCGATGTCCGGCCAGCTGCGTTCCTCTGT 1050 29 100.0 32 ............................. CCACGCTGCGGTTTTAGCGTCCCACTCGTTGT 989 29 100.0 33 ............................. TTCTGCGGCGTGCTGTTCCCGCCCCGCCCGGCG 927 29 100.0 32 ............................. TTTGTTAGCATTCAGTTTAGCGATCAGCTTTT 866 29 100.0 32 ............................. TAGCGTGCCTGAGCCATACGTAGCGATTTAGG 805 29 100.0 32 ............................. GAGCCGGTCACTACTTCGGCGGCCCGGTCTGG 744 29 100.0 32 ............................. TGTACTTATCCGCGATATCCGGAGATAACGAC 683 29 100.0 32 ............................. CGCATCGTTCTGGCCGAAGTTCGCATAGGTGG 622 29 100.0 32 ............................. GGTCGCCGCCGTGGTGAGACCGTGGGCTGGTT 561 29 96.6 32 ............................C AGTAGTCACACCTATACACCAGTTATTATCGC 500 29 100.0 32 ............................. AGATGACCCCCAGGGCACGCGCCCTTATGAAC 439 29 100.0 32 ............................. TGATCATGGTTTGACCCCCGCAACAATGCCGC 378 29 100.0 32 ............................. AAACCCTATAGCATCGTCTGAGTAATCGCCAA 317 29 100.0 32 ............................. CAGCCGAACACAAGCGCGGCGGCCGGAAACAG 256 29 100.0 32 ............................. GGGATGAGCAGAACCCATTGCAGCTTCTGCTC 195 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGCCGTTATCTCTCATCGTTCTGGCGAAACTGAAGATGCTACCATCGCTGACCTGGCTGTTGGTACCGCTGCAGGCCAGATCAAAACCGGTTCTATGAGCCGTTCTGACCGCGTTGCTAAATACAACCAGCTGATTCGTATCGAAGAAGCTCTGGGCGAAAAAGCACCGTACAACGGTCGTAAAGAGATCAAAGGCCAGGCATAAGCCTGAACTTTCGTTCTGATATCAAAACCCGCTTCGGCGGGTTTTTTTGTGGCTTCTGTTTATTGATAATTTGTCGTCATACATTGTGTTGTGTATGTCTATGGGCAGAAATTTTTAACAGTGGAGTAGAAATCACACTAATTTGGTAGAATTCAAGAAAGAATAGTTAGCTTATTTTTTATGATTTAAAATCAACTGGTTAGATGTTCTTTAATAATGCGTATTTGTAATGATTACGTTGGTAGAATGTTGTTATGAGAAAAAGTTTTTTATAAACATATAGATATGTTTAGA # Right flank : GTTAACGCCGTCAATAATATTCAGTTTAATCATGTGTTCCGTAAGCGTTAAGTGAGCGCCGTATTGACGATTATTTATTGGTGAGCTCTACGTTCCATGGCAGTAGTTCAGCCACTTTATTGCTGGGCCATTCCGGCAGTACGCTCAGGATATGGCGGAGGTAGGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4038-3521 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGU010000168.1 Klebsiella spallanzanii isolate SB6419, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4037 29 100.0 32 ............................. AATCAGACCAGCACCAAATTGCAGAAAGAAGA 3976 29 100.0 32 ............................. TTTTTACCCCTGTGTATTAAATCAGTAAGGGG 3915 29 100.0 32 ............................. CCGTGGATTGATGGTGCGATCGAGGGTGATTC 3854 29 100.0 32 ............................. CAAAAACACTGGCCCAGCTTGGATTGTCGGGA 3793 29 96.6 32 A............................ TGACCGGGAATGACGCAATGGACACGTGCGTC 3732 29 96.6 33 .............T............... GGCAAAACCTGGGTGGGAGGACAAAAGCGCGGC 3670 29 100.0 32 ............................. CTCGGGTCAACCTCGACGCCAATATATTCATC 3609 29 100.0 32 ............................. ACGTTTCTGGGCCAGTTAATTTGCCGTGCGAT 3548 28 79.3 0 .............A.-..A...C..T..C | ========== ====== ====== ====== ============================= ================================= ================== 9 29 96.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CCTGCAACTGAGCGGCTGGCAACCAGGCAATCCCGGAGTAAGCCGCTGCTGATATCCCTGCATGACTGGTTGGTGGAGAAAAGCGCCACGCTGTCGAAAAAATCCCGGCTGGGCGAGGCGTTCGCTTATGCCCTGAACCAGTGGGATGCGCTGTGCTACTACTGTGATGATGGTCTGGCAGAGCCTGATAACAACGCTGCCGAACGAGCCCTTCGTGCTGTCTGCCTTGGGAAAAAGAATTTTATCTTCTTCGGCAGCGACCACGGCGGTGAGCGAGGAGCCCTGCTGTATGGTCTGATCGGGACGTGCAGGCTCAATGGCATCGATCCGGAAACCTACCTCCGCCATATCCTGAGCGTACTGCCGGAATGGCCCAGCAATAAAGTGGCTGAACTACTGCCATGGAACGTAGAGCTCACCAATAAATAATCGTCAATACGGCGCTCACTTAACGCTTACGATAAACCGGCGAAATATTCTGAAGAATTACGCGGAGTGGC # Right flank : GACTCAGAGCCCTCAATCTAATGACTGTCGTGAATCTGTAAGTTCAATTTTTGAGCCAATTAAAAACGATCCTGGGATGAGATAAGCGTGTCGATAAAGGCTTTTTTATGCGGATATTTCAATACGTCATCGATATACATTATGCCTGTTTGAAATGTTGTAAAAGCCTCGGTGATATCCAGCGCGACTAATCCTCGTCCCTGGGCTTCCTGTTTCAGCTGCAGGGGAAGCGCCAGTAAACAGCAGTTTTGCTTCGCAAGCGTAATCGCGGTAGAAACCGAATACACCTCAAATCGAACCCGCTCAGGCGCGATAGTACATAGTAGGGGGTCATCGGTTCCTCCTTCTTCATATTCATGCTTCAGCACAATCCAGTTGTACTCATTTAGTTGCGCGGTACCGATGCGTAGGGCCCCGGTCAGAGGATGTTCCGGCGCGCAAAAAAGCATGAAACGAGTGGAAAATATAGGTAAATAATGAATAGAGGATATCCGCGCTTT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //