Array 1 6115-4201 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDES01000070.1 Acetobacter pasteurianus NBRC 3188, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================= ================== 6114 29 100.0 32 ............................. TGCTGAGTGTGGCGGCTGGGGTGGGATTCGAA 6053 29 100.0 32 ............................. GCGGTTGAGGAACTGCGATCCATTCATGACCA 5992 29 96.6 32 .............G............... CAAGCTCAATAACTCTTGATTGTGGTCAGGTT 5931 29 93.1 32 ..A..................G....... CACTATGTGTGTGTCCGATTGCGGCGTTGTAG 5870 29 89.7 32 ..A...T..............G....... TCAATACATAACTACATTTTGTGCCAGTTTAT 5809 29 86.2 32 .C.........T.G..........T.... GCCACGGCAGAATCTTGTAAGCCACGGCCATT 5748 29 89.7 32 ............CG.......G....... AGCAATCGACAGATTGTCTGAACGATGAACGT 5687 29 86.2 32 ..T..........G...T...C....... CTCAGAGTCTGTACGAGTGGTAATGCCACGGC 5626 29 86.2 32 ..T.........AG..............A TATAATAAATTTGTTATTGATAGAGATGGAGT 5565 29 96.6 32 .....................G....... TAATTTTGTACGGTTATAGTGGTAAATGAGGA 5504 29 86.2 32 T............G.T.....A....... GCGACTTTTAGATGATTCGTTTTGCTGAAGGG 5443 29 89.7 32 T............G.......G....... TATTCGGGATGTCTCACTCACATGCTTATCGC 5382 29 86.2 32 ............AG..........TC... AGAGCGCATATACACGTTGACTTTTTTGGCAG 5321 29 79.3 32 ..A..T...C..C...T......A..... GAGCAAAAGAGAGAATTAACGCTCGGATACTT A [5304] 5259 29 89.7 32 .............G.T.....G....... AAGCAATAAAAGACATAAAGAGACATTAAAAA 5198 29 86.2 32 ............AG.A........T.... ATGATTATTGGCTGGCTGTTTTTGTTCCATTA 5137 28 79.3 32 T..A.....-..CG......C........ TCGGTGCAGCACCAGCACGACCGCCGTAGGCC 5077 29 89.7 32 A..........T.G............... TCCGCCCAGCGACCTGTGTTCAGGTTCACACT 5016 29 89.7 32 ...........T.G.......G....... CAACAATTATGCTTTGCTGACAGAACATGGAA 4955 29 82.8 31 ....C....T.C.G.......A....... TGAGAATCTGGGTAGATAGTTCGGAGCGACG 4895 28 82.8 33 T.......T...CG..-............ ACGACAAAACAAGGATATGTGGCCATCTGTTGC 4834 29 86.2 32 ............CG....A.........C AATTGCTTAGAGCATATTTGGCTGTTCTCGAA 4773 29 86.2 32 A............G.......G......T GCTTGATTAACGTACCGGATGTCATTTTGTCA 4712 27 86.2 32 .......T.C...--.............. GATAATCGAAGCGTTCCACAACCAAGAGAAAC 4653 29 82.8 32 T............G.......G..TG... AAAATATGACCGCCTCGTCGTTTTGATCATTG 4592 29 82.8 32 .C..A......A.G.C............. TTCAGTCTTTTCCGCAGAAAGAAGTCACCCCT 4531 29 86.2 91 ...........T.GG.........G.... GATTTCCTTTGCTCTAGTGCACGGAAGCAGAAGGGGTCCCCAGGAATGGGGGTTAACCTGCTAGTGTTGTCTGGACAGTTTTTTCCTCAAG 4411 28 75.9 32 A...-.....TA.G.......G......A TAAAAAGGGAAAATCGTTTGAACACGCAGAAG 4351 29 86.2 93 T...........C.A.............C TTAGCGGAATGCGTGGACAATGCATTGTTCACGACTTCCCCCGTGTGTGGGGGATAGCCATTCAGAGCGAGAGGAATGTATTTCTGTTTCATC 4229 29 82.8 0 AA.....T.......T............A | ========== ====== ====== ====== ============================= ============================================================================================= ================== 30 29 87.4 36 GTCTTCCCCGCGTCTGCGGGGTTTAACCG # Left flank : TGGCGGCCCATTTAGATAGAAGTCATGGTGGGGTATAGCCAAGCGGTAAGGCATCGGATTTTGATTCCGTGACCGGAGGTTCGAATCCTCCTACCCCAGCCATTCCTATCCATTGGTTGGCGCTGGTAGCTCAGTTGGTCAGAGCGGGCCGCTCATAACGGCTTGGTCGGGGGTTCAAGTCCCTCCCGGCGCACCAATCTTTCCTTTTTAAAAGGCCATCCATAGCCTCATATCCAGAAAAAGGCTTTTAAGCCTGTACGAAGACATTCTCTTCAATGGTTAATCCTGTTCCCTATCTAGATATGAATTGGCCTTTTGAAAGCGGCATTACATAAAAAACAAGCCTTTGCCGTTGATCTATTTTATCTAGCTGTCTATCAATAAGCCTTCAAATCTTGAATTGGTTTCATCTAGCAGAATGCTATTTCTCGCCATTCGTGATTTCTCCGTAGATCTTTGACAACAAAATAATGCTTTGGAACCAAACTCTTCCAGAAAGA # Right flank : CTCCTGTCCGAATTCTGTTAGCATTCTGCGGCCTATTCCCCTCGTCTGCACGGGGTTAACAGTGATCAAAATCAAAGATAAATGTTAAAGGGAGGTCTTCCCCCGCTTGTCAGGGGTTTTACCTGAGGATGGCCCAAATCTTGAGCCAAGCACGCCGTATCCTCCTCTTGTTGGGGATTAACCGTAGCCACCAATTGTCAAGAAAGTGTGCACTTAGCCTTCACCGCATCTACGGGGATTAACCGAAAACCTGATATCAAACTCTGATTAGCAATAAGTCTTCCCTGTGTATGCGGGGTTTAACCTTAAGACGATATCCTGATGTAACTTTAGATCCCGTATTCCTCGCGTGTGCGGGGTTTAACCGGAGGTAATTGATCCAACTCTGGTGATGTTAATGCCTTCCCCGCGTATGCAGGGTTAAGCCTCCGTTGTTCACATGACACAAAACAAAACGGCCTTTTCCCCGCATGTTCGGGGGTTATCCGCGCCATTCTATG # Questionable array : NO Score: 4.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.40, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.12, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGTCTGCGGGGTTTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTCCGCGGGGTTAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [38-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //