Array 1 22464-19077 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOL01000016.1 Eggerthella lenta strain ResAG-121 ResAG121_contig_016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 22463 33 100.0 36 ................................. GAGCGGGACTGCGCCGAGGCTGTCTACGACGCCAAC 22394 33 100.0 36 ................................. CAGCGGCGCTGGCATGGATTATTGCGACTTGGGCAC 22325 33 100.0 34 ................................. CCGTTTTGTCTGCCCTGGGACTTGGTGGAGCTTG 22258 33 100.0 33 ................................. CGAGGAGTTTCGCCCCTATCGCGATCCGTCCGC 22192 33 100.0 35 ................................. TTCCTGCACGCAGAGGGCGGGCCGCGCACGTGGTG 22124 33 100.0 33 ................................. TGCACACCCTTGCCGAAGATGCTCAGCATCGGG 22058 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 21990 33 100.0 34 ................................. TCGGCAAATCTGGGACGCTGGAAGCCGCTGAGGC 21923 33 100.0 35 ................................. GAGCTCAAGCTCAAGAAGTGGCGCAAGCAGACCTC 21855 33 100.0 36 ................................. CGGATCGTACAACACGGCAAGCGCGCTGTGGGGCGC 21786 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 21716 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 21650 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 21584 33 100.0 32 ................................. GAGTTCGTTACCGACACGACCGGCCTCATCGG 21519 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 21452 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 21385 33 100.0 34 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATT 21318 33 100.0 32 ................................. AGCCCTCGCTCGCAGCCTCGTAGCGAAGCCTG 21253 33 100.0 34 ................................. AGCATCTCGAATTTCGCGGCGAGCGATTCGTTGC 21186 33 100.0 35 ................................. AAGGCCGCCAACGCCAAGTACAGCCTGGAGGAGAC 21118 33 97.0 33 ........T........................ AAAGCAGTCATCACAACGAGAGAAAGGGGCATC 21052 33 100.0 34 ................................. ACGTCGTGTCTGAGCATCGACATCACAACGTCTT 20985 33 100.0 32 ................................. ATTGCCGTTTTTCAAGGCTGGTAGCAAGCAAG 20920 33 100.0 34 ................................. GTGCCGGCAGCTCCCGCAGCAGCGGCCCCTGCGG 20853 33 100.0 33 ................................. AGGTACGCGCGCGCCCTTCTCGGTCTTGTAGTC 20787 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 20719 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 20652 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 20585 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 20518 33 100.0 35 ................................. GACTTGGCGTCGGCCGCGGCGCCGGACAGCGCCTC 20450 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 20384 33 100.0 33 ................................. CGCGCCACAGAAGGCGCACCTTGCGGGTATCGG 20318 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 20252 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 20184 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 20117 33 100.0 25 ................................. AGGCCCTGTCGGCCCGGTCGGCCCT Deletion [20060] 20059 33 90.9 34 ...GGC........................... ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 19992 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 19926 33 100.0 35 ................................. ATGATGACCACCGACTCGTCCGCGGTTCCGTAGAA 19858 33 100.0 35 ................................. TAACAGACCGAAGCCCGTCCGGGCGGGTCGAATAC 19790 33 100.0 35 ................................. CATGTGTTGCGTCCTACCGCGTCACTGATGATGCC 19722 33 100.0 34 ................................. ATCGTGTGCGGGACGAACGACGACAAGCTGGACG 19655 33 100.0 34 ................................. GAGGACGGTGTGGATCCATTACGACATCACCGGG 19588 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 19518 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 19449 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 19383 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 19317 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 19246 33 90.9 36 ..T...T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 19177 32 93.9 34 .................-..............C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 19111 33 75.8 0 .....GTT.A..T.....C.C..........G. | C,T [19095,19107] ========== ====== ====== ====== ================================= ====================================== ================== 51 33 98.9 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCGGCGATCTAGATGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCG # Right flank : CGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //