Array 1 51580-44931 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJRD010000010.1 Acinetobacter baumannii strain 173876 NODE_16_length_65122_cov_90.565735, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 51579 29 100.0 31 ............................. TTAGAAACTTTTGATATAGACGCAGCAAAGG 51519 29 96.6 31 ............................T ACCAATTTTCTTAAAAAAATTGAGTTTGGTT 51459 29 96.6 31 ............................T CAAGGTTATGAAGCTTATGAGCAGCAACATT 51399 29 96.6 31 ............................T TGCCCTCTTTCACGATTTTCTCAAGGTTATG 51339 29 96.6 31 ............................C ACACCATCGTCATAGGCTGTGAATCGTGTGC 51279 29 96.6 31 ............................T TCATGCCAATTGTTGCCGTATTGCCTATGAA 51219 29 96.6 31 ............................G CGAAGTCGAGCATATCGGTCAAAGCATTGCT 51159 29 96.6 31 ............................T GAGCAAGCTAAAGCCTACTTTAAACACGACT 51099 29 100.0 31 ............................. TTGGCAGGAAGTTGACTGGCAAATACAAAGC 51039 29 100.0 31 ............................. TAACGAAGTCATACGGCTTGTTTTCATTCGC 50979 29 100.0 31 ............................. GTAGGTGCAGTAATTGCAGGTGGTGCGGGAC 50919 29 96.6 31 ............................T AGTGCACAAGATCCAAAGCAAGCATATGCCT 50859 29 96.6 31 ............................C CCGAAGAAATCGCAGCAGGTCACCGCATTGA 50799 29 96.6 31 ............................T GTATTGGTTGTATCTGCCGAAATGGATGTAG 50739 29 100.0 31 ............................. GCAAAAGTCTTATTACAAAGAAGCTGGATTC 50679 29 100.0 31 ............................. AGAAACAAAAAACCCGCATTAAGCGGGCTTC 50619 29 96.6 31 ............................T TAATTAAACTTCGTAATGAGGTCTATGTTCT 50559 29 96.6 31 ............................T AATCATAAATTATTTTCACCTATGGTTTAAT 50499 29 96.6 31 ............................T AGCTTTCCTTCTTTTACCAACTGCACGACCT 50439 29 100.0 31 ............................. AAATTTGCAACCGTGACAACAGCAGCAAATA 50379 29 100.0 31 ............................. ACCGCTGTTTTGGGGTCATTTTTTTGAGCTT 50319 29 96.6 31 ............................T TAAACTTGATAATTTTATGATGTTTAAAGAA 50259 29 96.6 31 ............................T ATCAAGGGATTACAAACATACCGTTAAATAC 50199 29 96.6 31 ............................C ATCACCACCTTTGATACGTTCAATTTTCCCC 50139 29 96.6 31 ............................T GCTCTGGCGTTCGCATAATGCCGACTATGTA 50079 29 100.0 31 ............................. AACACATTATGACCTTGGCGGAGCTTTGCAG 50019 29 100.0 31 ............................. ACTGGTTGCGGTACAGGTTATGTTCCGGGTA 49959 29 96.6 31 ............................T GTTGATTGTAATGATCTTATGAACTCACATT 49899 29 96.6 31 ............................T ATTAAATCAGGCTGTCAAAATGGCGCGACTT 49839 29 100.0 31 ............................. CTATGACAATTATCCAATTCATCAAAGATTC 49779 29 100.0 31 ............................. CCCCCAACAGGCTTGTTGTTAATCGCATTTA 49719 29 96.6 31 ............................T GTACCACATCCTGTAGGTGGCATATCACAAT 49659 29 96.6 31 ............................T TGATTACAAAAACCGGCTCTTCGATGTGACG 49599 29 96.6 31 ............................T TATGTTGAGCTTAAAGCTTCACCAGCAAAGA 49539 29 96.6 31 ............................T TTTGGAATAGATTGTAAAAGTGCAGAGAAAA 49479 29 96.6 31 ............................C ATACCGTATAAATCCATTTTAGCAATAGCTG 49419 29 96.6 31 ............................T TGCAAAATCTTCGCAGGACTAGCTTTTAGTT 49359 29 100.0 31 ............................. CGGTAAACAGATGGAAAAATTGTGCGTTTGT 49299 29 96.6 31 ............................T ACCACGAAGAAATACCAAACTGCATAGATGA 49239 29 100.0 31 ............................. ATTATCATCAGGATCACCTTCGGCACGACCT 49179 29 100.0 31 ............................. GGCTATGAAATGACTGTTTCAAGTGATTTAA 49119 29 96.6 31 ............................T AACCCATCTTGCATATTGCCCCAATCTACAC 49059 29 100.0 31 ............................. TTTCCAGCATGCTCATAAGCATCTGCAACAG 48999 29 100.0 31 ............................. GCAAATAAAATATCCTCTCGGAATAGCCCAA 48939 29 100.0 32 ............................. GTGGGTTTATATCTCTACTATAAAAAATGGAA 48878 29 100.0 31 ............................. CCATGTGAATAATAAGTAATCCAAATATCTT 48818 29 96.6 31 ............................T AAATTCCCAAATCCTAGAATGTAGAAAATGA 48758 29 100.0 31 ............................. ACTTAACCCAGCGAATAAAGCAGATCGGGAA 48698 29 100.0 31 ............................. TCCACGACGTTTGATGCAGTACGACAATGCA 48638 29 96.6 31 ............................G TCCAACGGTGTGTATCGATGATGTATTCATC 48578 29 96.6 31 ............................T GCTAATACTAAATCGATAGCTGATCAACTTA 48518 29 96.6 31 ............................T AGTACATAACTTTCTTTATAGAAATTCAGAC 48458 29 100.0 31 ............................. TGAATTAAACCCCTGTATTAATGCCAAAGGC 48398 29 100.0 31 ............................. TTGGGTTTTTCTTTGGTAATGGCTTAACTGA 48338 29 100.0 31 ............................. TGAATTGTAAGGTCCTTAATCATCTGATCTT 48278 29 100.0 31 ............................. GACAACTCCCCAGTAATTTCAGTTACATCAA 48218 29 96.6 31 ............................C TGAAGGAAATCCGACTGGTGGTCAATCTATA 48158 29 96.6 31 ............................T CCATTACCCAACCAATAGCCTCAATCAATTG 48098 29 100.0 31 ............................. TTAACACCAGATGGTCAACCAGCGCCTTTTG 48038 29 96.6 31 ............................T GTTATCCCCGAAAGAATTCCTTTAGCCAGCA 47978 29 96.6 31 ............................T TTAGCCAAGAATGCAACAAGTAAACACGCGA 47918 29 96.6 31 ............................T CGACGATTACCACCACGCCCTTTTTTGATTT 47858 29 100.0 31 ............................. ATAGCTGCACCTACTGCCGCATTCTGTGCTG 47798 29 100.0 31 ............................. GTATGACGATGTACTTGTAATTTCTGTACAA 47738 29 100.0 31 ............................. GTTTCTATATGGCTAATGGTTAGCGCAACAC 47678 29 100.0 31 ............................. TCACTTGATAGCGTATCATAGGTATATTCAA 47618 29 96.6 31 ............................T GAAAATGGTATGAATAAAGGCGTACCACAGC 47558 29 96.6 31 C............................ CATTATGCGAACTTTCAGACGCTAAAATTTA 47498 29 96.6 31 ............................C CCGTGATAAGCCCATAACTATGTAAGCCCCA 47438 29 96.6 31 ............................T GCAATGGCTTACCATCACCAGTTGTCTTATA 47378 29 96.6 31 ............................T GGCTTAAAAATGAACTTGTTAATGCAATTAA 47318 29 96.6 31 ............................T ACTACGAAGAAATACCAAACTGCATAGATGA 47258 29 96.6 31 ............................C GCTGCAATCAGATCACGTACAGATGAATCAG 47198 29 100.0 31 ............................. AAGCACCAGATAAAATATCTTCAATACTTAA 47138 29 100.0 31 ............................. TCAAATGTTTTATAAGTCTTTGCAAGATGAT 47078 29 100.0 31 ............................. ATAGTCGGACGGTCACCCTTCACCGGGATGG 47018 29 96.6 31 ............................T GTTGGTGGGGGCGGTTCGGCTCCTGATATGA 46958 29 100.0 31 ............................. AAAGACGATGATGTAAGCTATATTCAAAAAA 46898 29 96.6 31 ............................T TTAGTTGTTTGCACCAATTTAGCAATACAAT 46838 29 96.6 31 ............................T GAAAGACACATGGGATGGCGTGGCTAAGCAA 46778 29 100.0 31 ............................. ATCCGCAAGCCCACTAATTACATCACCCAAT 46718 29 100.0 31 ............................. CGTGAAAATAGCAATCTGATTAATACGGCAT 46658 29 100.0 31 ............................. CCACAAGCCCTTTGCTTCAATAGCTTAGGGC 46598 29 100.0 31 ............................. AGCACTGTTGCATTTATCTTTCATATTCTGA 46538 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 46478 29 96.6 31 ............................T TGTATTGTTGCTGACTTAAACCAATTCTTAC 46418 29 96.6 31 ............................T ATATCCATTCCCCAGCCTGAGTCTTTACAAC 46358 29 96.6 31 ............................T ATATCCATTCCCCAGCCTGAGTCTTTACAAC 46298 29 100.0 31 ............................. ATTGCTTCAATAAGCTGAGTCACAGCCATAA 46238 29 96.6 31 ............................T TTGTAACCACCAGTTAAAGTATTGACTAAAT 46178 29 100.0 31 ............................. TTACTCGAAAGCAGGCTTTTGAGTATTTGAA 46118 29 100.0 31 ............................. CAGGGGTCAAGTTCAGAAGATTTACGTTACA 46058 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 45998 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 45938 29 82.8 31 ...GC....T...C..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 45878 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 45818 29 82.8 30 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTT 45759 29 79.3 31 CA..G.......CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG C [45754] 45698 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 45638 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 45578 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 45518 29 89.7 31 ....G.......C...............T TCATCACATAGCCTTTTACACGCATCTTGCG 45458 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 45379 29 82.8 31 ....G.......CC..........A...T GATAGTTCGGAGCATGTAAATCTCCAAAATG 45319 29 82.8 30 A..TA........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [45294] 45259 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 45199 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 45139 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 45079 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 45019 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 44959 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 111 29 95.9 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTGGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGATACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCTTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTAATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTGAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [71-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //