Array 1 78680-82104 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRLP01000003.1 Bifidobacterium adolescentis strain AM12-20 AM12-20.Scaf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 78680 36 100.0 40 .................................... TGCGGCAAATCGGCTACACGGGGGTGTCGAAAACCGATAA 78756 36 100.0 35 .................................... AAAGTGCATCTTGACGCGGTGCCTAGCGACCAAAC 78827 36 100.0 34 .................................... GCCAGGCTGTTGCAGCAACGCAATCATGCCGCTT 78897 36 100.0 35 .................................... TAAAGCGTGCCGTTATCACGATCAAGGACGCTCAA 78968 36 100.0 35 .................................... TGGACGTATGGATGACGTCAACGTGCTTAATGAGA 79039 36 100.0 36 .................................... TCCCGAAGGCACTGTGTTTACCGTGAATCCTATGGG 79111 36 100.0 38 .................................... GCAACACCTGCTACATGCAACTCGAACTGCAACGCGCA 79185 36 100.0 36 .................................... AAATATTTATGTCGCCAAAATGGTTGACAGAAAAAC 79257 36 100.0 36 .................................... CGTACATTATCGGCTAAACTGGCCGAAGAGGGGTAT 79329 36 100.0 37 .................................... TGGTGAGTGCACCGTGTTGAAAAAACAGTGGAAACCG 79402 36 100.0 37 .................................... TGGTGAGTGCACCGTGTTGAAAAAACAGTGGAAACCG 79475 36 100.0 37 .................................... TGGTGAGTGCACCGTGTTGAAAAAACAGTGGAAACCG 79548 36 100.0 36 .................................... ATCAAATACGCGGCCACATGGCTCAATGCTGCGGGA 79620 36 100.0 36 .................................... TTATCACTGTTGCGTGGCGTTTCCATAATCTGCGCG 79692 36 100.0 34 .................................... TTCAGCTCATGCTTTTCAGAATCGATCACAACCA 79762 36 100.0 35 .................................... CAGGGCGACAGCGGCCCGCACCGGGTGAAATCCTG 79833 36 100.0 38 .................................... GGAGTAGCAATGAAAGCCAGCGAACAACAGGCGCTCAT 79907 36 100.0 36 .................................... GACACAGACTTCACCTACCGCACAGGCGAAACCGTG 79979 36 100.0 34 .................................... GGTGAAACGAGTCGGGCGCGAAAGCAAGAAACAC 80049 36 100.0 38 .................................... AAGGGCGACATGTACGTCAATGCCATCGCCTGGCTGAC 80123 36 100.0 38 .................................... GCGGTGCCGACCTGAGCGGTGCCAACCTACGCTGTGCC 80197 36 100.0 37 .................................... TACCGTAGCGCTTGAGAGTGCGCGGCGAACCAATGAG 80270 36 100.0 37 .................................... TCAGATGAGGTTTTTTTACGATTCGCGGAATCAGAAC 80343 36 100.0 38 .................................... ATGGTGCGAGACACCACCCACATGTAGCGAGATTACGC 80417 36 100.0 33 .................................... ATCTGATTATCGATTTTCGTCATCGCGTCGGTA 80486 36 100.0 34 .................................... GGACGGTCCATTCGCTGACACCGAGCAGAGCGGC 80556 36 100.0 37 .................................... AGTGTGCCGGGGATGGTGGCGAGGTTCTGGTAGATGG 80629 36 100.0 34 .................................... TGATAAGACGCACAAATGGGAAACTAAATCGGAC 80699 36 100.0 37 .................................... CGCAATGAGTTTCATACGGCGGTTCCGCAGTCTTTGA 80772 36 100.0 34 .................................... GAGGACGGCGACATCGACGACCCGGCCAAGCTGC 80842 36 100.0 34 .................................... GATACCGTAGTGCGCGCTAGCCTGACTGGACGAA 80912 36 100.0 38 .................................... GTCGACCATGATCATAGCTTCAACAAACTTCTGAAAGA 80986 36 100.0 36 .................................... TCGCATTCCCAGCAATCGCCACCTTCATCGGCGTAA 81058 36 100.0 37 .................................... GAACGGCGAGGAGGCGATCATCACCCGCTCGAAGGCG 81131 36 100.0 34 .................................... GAAAACCGCGACGAACGCTGAAGAATAGTCTGAA 81201 36 100.0 36 .................................... AAGCTCAATCCCCTCTCACTGTCCAAGCTGGAGAAG 81273 36 100.0 37 .................................... ACGACACGATACAATCAGGCGTATTCATTATTGAGTG 81346 36 100.0 35 .................................... GTGGCCATCGACATCGAGACCACAGGATTAGACAG 81417 36 100.0 35 .................................... GGGTGGAGGACCCTCTGGCACGATGCCAGCGGCAA 81488 36 97.2 37 ...................C................ AAGAGCGCAAATGTGACAATCGTAGGGCACTGTCACC 81561 36 97.2 39 ...................C................ AATGGGCAATGTCGGCATATGATGCTTTCCCTTGGCCGA 81636 36 97.2 36 ...................C................ AGCATGAAATCGCTGGATTGAAGACTTCGATCGGCA 81708 36 94.4 37 .G.................C................ GCACCGTATGCACTTCCCTTAAAAGGAAAAAGGCGAA 81781 36 97.2 37 ...................C................ ATAGACCACAGAGACGTGAGCGACGACGGCCAGGCAC 81854 36 97.2 36 ...................C................ GTGGCCTGAGCCGTGACCTTAAGAGTGTCGGCGGTT 81926 36 97.2 36 ...................C................ TTGCGTACGAAAACGGCGTACGCTCGGCTAATGTCA 81998 36 94.4 35 ...................C..A............. CCCGGCGACATGCCAAGCGAAGTGCCGAACTAAAG 82069 36 86.1 0 .........T......A..CG...T........... | ========== ====== ====== ====== ==================================== ======================================== ================== 48 36 99.1 36 ATTCCTGAGCATTCAAGCTTAGGACTTCATTGAGGA # Left flank : ATCTGGTGGCATATGATATCAGCGATGATTGCTGCCGCTCACATGTTGCGAAAATTCTTCAACACTATGGAGAACGATTGCAATATAGCATCTTCTTACTGCGGGTACGTCCTTCGATGATGTTGGATGTCCGTATGCAGATAGAGAGGGAAATAGATGACTCAATCGATTCTGTTGTGTTCTGTTCTCTTGGAACCATTTCTCAAACGGAAGAGGGCTTGGATTTCTTGGGGCGCCGTGGATACGTCGATTTAGAGATACCGACAGTGATTTGAAGTTTTAGCCTAATGGTGATGTTGTTTGATAAGTAAAGAGTGTTTTGCTGTTTTTCAAGTGCGAGAGATGCATCATTGCTGCGACACACGGTGAGCGCTCGCACTTGAAAAATAGTTGTTTTGGAGCCAGTGAACTTATATTGCTTCTGTATTGCGATAGAAATGAAAGAGTCGCTCGCAAAAGCCTTTAGAATATGTGTCATTGCAAGGTCTTAGCCTATGACT # Right flank : AGCTGTGGGCGAAGAAGCGCAACCGTCTCCAGTTTTTTGGATTAAAGCCAATATTCAGAGGTCTATCCAAAATCGCTGGATGATACTGTCTTCGTTCCGTCCCGTACCGTTCACGATTTCATTCTCCATCTTTCCACCATTGCTGATAATCGTCCGTCTTGATGCTTCATTGCTCTTGTGACAGGTAAGTAGAACACGTTGCTCGCCCTGCTCTTTGCAGATGGGCAGGAGTAAGGCGAGCATCGCTTTGGCATACCCTTTTTGACGTTCCGATGGCAAAATGCTATACCCAATATTTCCTCCGTATTGCAGCAGAAAAGGGGATAGCGGACGTCTGAAATCAATGATGCCGACGAGCTTGTCATGCCTTCCGAATAGCTAAAAATACTTCCGACGGCACATAGCCTTCGCCGTATTTCTTTTTCAATCGATTATCGAAATCGATCCATTCATCAAAAGAATCCGTGTCTTCGAGACCGGCGCATCCATCGAGACTGTCG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCATTCAAGCTTAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //