Array 1 56430-53165 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBSK01000055.1 Myxococcus sp. CA027 NODE_71_length_57783_cov_29.2781_ID_48476, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 56429 36 100.0 35 .................................... TCGTGGGTGTCGCCGTGGCGCATGGCCGCATACAA 56358 36 100.0 36 .................................... ACGCTTCCGGGTATTTCGACCTCGAAGGCTCCCACA 56286 36 100.0 35 .................................... GACAGCGCCTGCCCGTCCTTGCCCGCCACCTCGTG 56215 36 100.0 34 .................................... TACTTCTCAATCGCTTCAACCAGTTCCTCCCCAT 56145 36 100.0 36 .................................... ATATGGAGAAGCTTTTCTCGAAATTTTTCCGGGCTC 56073 36 100.0 37 .................................... TTACGGCCTGCGCTGGGCGCATGGTGGCCAGCGAATG 56000 36 100.0 34 .................................... CGGTCATCGGTCGTGTCGTAGCCGGTCAGGCGCT 55930 36 100.0 35 .................................... AGCCCGCTCTTCTCGTGCATCGCGAGGGCCCCAGG 55859 36 100.0 35 .................................... TTGTGGGCCATGGTGAGTTTCCTTTGGGGTTGGGT 55788 36 100.0 34 .................................... TCGAGTTCCGCCGACGCCTTGCCGTAGGCGACAT 55718 36 100.0 35 .................................... AACTCCACCGACTTCGAGGGCCAACCCGACTGGCT 55647 36 100.0 39 .................................... CAGCAAGCTTTGCAGTGCGGAGAAATGCCGGCGGGAATA 55572 36 100.0 35 .................................... GCCTGACCCGGCTCAGCCGTACGGGCCGTTCCCGG 55501 36 100.0 36 .................................... ACTAAGCGCAAGCCGGGCAGCAATAGACCGACTATC 55429 36 100.0 34 .................................... TAGAGGCTGAAGCGGTTGCGCTCGCCCGCGTTGA 55359 36 100.0 36 .................................... GCACGAGTCCTCGGACGGAACAGCGCAGGCGCCTAC 55287 36 100.0 34 .................................... TCTCCCCTCGCCGCAAGGCAGGGGCGGTCCTCAA 55217 36 100.0 35 .................................... GAGGGATTGCGACACGTTGCCCGTCCTGGGTCCAG 55146 36 100.0 35 .................................... AGGATCGCGTAGAGCACAGCCACCATCTCCTCCCG 55075 36 100.0 38 .................................... TGTCCTGGCGGAATGACTGCATGAACAACCCCATTCCG 55001 36 100.0 39 .................................... TCCTGTTCAACGTCGCCCGTCGCCATCACGCCTCCTAGG 54926 36 100.0 34 .................................... GCAACTGGCGCGGACTGGCGTAGAAGGAGTCCAG 54856 36 100.0 36 .................................... CCGAGCAGAACCCCGGGTAGTTGGCCTCTACGACAC 54784 36 100.0 36 .................................... TCGGAGCGCTGGCCGAAGTAGATGGTGACGTTGAAG 54712 36 100.0 38 .................................... GTCCCGCCAGCACGGGGCGATTGTCACCACCTCGGACG 54638 36 100.0 37 .................................... CGTCGGCTGCGCAGAGGGGCTGTGATGGCGGCAGTCA 54565 36 100.0 41 .................................... CCGGAATAACTCAGCGCCTTGAGTACACTTGGGTGGTCCGC 54488 36 100.0 37 .................................... TCCTCCGTCACCAGGGACAGCGCCTCCAGCGACACCT 54415 36 100.0 37 .................................... CCCTAGCAGGTACCACGACGCACTGACACCCCATGGC 54342 36 100.0 36 .................................... TCCCCCATAGGCTTCAGGGAAACGGTCACGAAATTG 54270 36 100.0 33 .................................... TTCCTGGACCCCGCTGGCGCCGCCGAGGTCAAC 54201 36 100.0 36 .................................... AAGGTAGTCACGGCTGCGTCGAGCAGCTTGGCGAGT 54129 36 100.0 33 .................................... GTGATGCGCCGACGCAGCGCCTCTTCTTCACAA 54060 36 100.0 33 .................................... TCCTTCCGCAGGCGCACCAGACGTTGCAGCGGC 53991 36 100.0 40 .................................... ATGCTGTCGAGTCGCGACAGATCTCCGGCGCCGATGGTAC 53915 36 100.0 34 .................................... TCGTCCCGTTGCACGAGATCCGCGACGAGGAGAA 53845 36 100.0 36 .................................... CTGACGCCCCTCCAGTCGAAGAAGGGAACGAGCGTG 53773 36 100.0 37 .................................... ACGTCGGCCACCTCCCCAAATGCGTCAGCCGTCGTCT 53700 36 100.0 35 .................................... GCGGCAAATCCTCGCGGACGTGGCGCTGGAGATTC 53629 36 100.0 36 .................................... AGCGGTGAGTGCGCCTGCGTCGTGCCGTCCTCCAGG 53557 36 100.0 35 .................................... GCCCGGAACCGACGCGAGCGCCGCCAGGCACAGCA 53486 36 100.0 36 .................................... CCGGCCTGGGCGGCCTGCACGCGACCCCCAAGGGCA 53414 36 97.2 37 ...........T........................ GTGACGCCGTCCGCCGCCCAACCCTCCAGTCCGCAGT 53341 36 100.0 36 .................................... AACCGCTCGCTCTTGGTCATCTGGGTCATGGTGACC 53269 36 91.7 33 ...TT....T.......................... TCCTTCCGGCAGTCGCAGTTCCAAGGCTTCATA 53200 36 88.9 0 A.............................C.A.G. | ========== ====== ====== ====== ==================================== ========================================= ================== 46 36 99.5 36 GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : CGACCCGCGGCGGTGGCGGAAGGTGTATGCCCTGCTGAAGGGATATGGGGAGTGGTTGCAGCTCTCGGTGTTCCGTTGCTCGCTGACGGACCGGGACCGGGAGAAGCTGCGCTGGGAGCTGTCGCGGCGGATGGATGCCGTGGATACGTTGTTAGTGATTGGGCTGTGTGGCGGGTGCGTGGAGCGCGTGCGCGCCATCAACGCGAAGGAGGACTGGCCGGAGGAGCCCGCACCGTTCAAGGTGCTGTGAAGCAGGCGACAATCAAGCACCTCGCCGTGGCGGAGACCCGCAGCGGCGAAAACGGCGGATTCCTTTGTGATTTCATAGGGTTGGGGCTCTTTGACAGGTGAATAGGTGCATGATCGATGAAAAGCCGAGTGGTTTCATAGGGTTGGTGATTCTGGGTAGGGCCTGGGACGGCCAACCTGCGTGAAGGAGGGGGAGGTGCTTGAAAAGGGGTTTGTAAGGTGCTGGAATTGCTGGGAGATTCAGGCGGGCA # Right flank : GTTGGGGGCGCGTCTGGGCGTTTGCACTGGCCCCTCGGAAGGGTGACCGCGTGACGGGGCCTCCAGCCGTTCCTGAGCGGCGCTGGGGCCACAGCCCCATTACCGGAGTCCCCGGAACGAACACCCACAAAGTGCGCAATCCCTAGTTGGTCGGAGCGGTGCTTGGGGGTAATTGACTGTGTTTGTGTCAACATACGCGCAGGCTTGGTAGGATTGTTGATGTTGCGCAGAGGTCTTGTTGCTTGCCGCGAGTCGCCAATGGAATTTCAAAAGAGATAGGCTTTCGCCCATGGCCAATGCCGTTGGCGTGAACAAGATGTCCGTTGTCACCAAGGACTCCAATGGTGTCACCGTCGCCTTCCCGGACGTGTGCAAGACGCCAAGCCCCGCCGGGCCGATTCCCATTCCCTATCCCAACATCGCCAGGTCCTCGGATACCGACCAGGGCACCAAGAAGGTCTCCGTGGGGGGCAACCCGGTGTGCGTGAAGGACTCCAGCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 5981-2408 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBSK01000060.1 Myxococcus sp. CA027 NODE_79_length_53174_cov_27.5337_ID_48492, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 5980 36 100.0 34 .................................... ATGCCCTTGGAGACGGAGGTGGGCTGCGCGGTGC 5910 36 100.0 35 .................................... TAGGCACCCTGCAAGTGAGGCCATATGCTTTTGTA 5839 36 100.0 34 .................................... TGCCTAGCAGCTTCGAGCGCCCACGGAACTTGCG 5769 36 100.0 38 .................................... CTCACGGTCATGAACACGGGAACCCTGGATGACCTGCG 5695 36 100.0 34 .................................... TCGTAATAGGGCCGCAGGACGCCAGTTTGATGCG 5625 36 100.0 35 .................................... GTCGAGGCAACCGCCGTGGAGAGGGGATTGGCCTT 5554 36 100.0 36 .................................... TAATAGCCCATCGCTGCGCTGACCATCAGCGTGTAG 5482 36 100.0 35 .................................... CGCTTCACGTGGTAGATGCGCAGCTCGCCGCCGAG 5411 36 100.0 39 .................................... CTTCTTCATGGTGCTCTCTGGCGGCTGCGAGGTGAGATG 5336 36 100.0 34 .................................... TGTTGGCCTCTGCCCTCTCTGACCTCTCATGGTC 5266 36 100.0 36 .................................... GTGTACGGCGCGGGCGTCGATGCGCCGAGGAGCACG 5194 36 100.0 33 .................................... CGGCCGGATTCGTCCCGCTCCAGCTCGCCGGGC 5125 36 100.0 38 .................................... ACGTGCAAAACGTCCTGAGGCTGATGCGCAACTTGCAT 5051 36 100.0 37 .................................... AAGCAGAAGGCCGCGGCCGCGCGCGCTGGCCAAGGTC 4978 36 100.0 37 .................................... CCTAAGTAGATGCCCATCTCCGGGTGCACCAGCAGGT 4905 36 100.0 33 .................................... CACTACATGGCCGCCAAGGAGGCGCTCTTCGAG 4836 36 100.0 35 .................................... ATGGGCTGTCGCTGGGTGTCGTCGCGTATGACGGT 4765 36 100.0 42 .................................... ACAGCCTTCCTTGGTCGTGGTGCGCTGGCGGTGTCTCTTCCA 4687 36 100.0 37 .................................... TCAATGATTTCTCATACCCCCGCCATCTCTCTGTCTA 4614 36 100.0 41 .................................... TAGCGCCTGCTCTCCCCTGCACGGTGCGCCGCCGCCTCGGC 4537 36 100.0 41 .................................... AGGTCCTTGGTGCCGTTGGGAAACGGCACGAGGGTATTGAG 4460 36 100.0 39 .................................... GTAAATGAGGCTGTAGCTGCGGGCCTGGGTGTCATTGAG 4385 36 100.0 33 .................................... GAGTCCAGGACGCTGTAAACGGGCTCAACGTAG 4316 36 97.2 37 ..........T......................... CCGCCGTAGGGCTTCGGGCCGACGACCCAGAGGGAGT 4243 36 100.0 36 .................................... CCTCCCTTAGCGAGTTTCCACCTCTCAAAATCCAAG 4171 36 100.0 37 .................................... AGCCAAGGGCTCTTCACGCTCCAGCCGGGGCGCTTCA 4098 36 100.0 35 .................................... GTGCGTGTGGCCATCGCGATCCCCGAGGACGGGAA 4027 36 100.0 35 .................................... TTGCAGTTGGCGCAGTACTCCGACGTCAGGCTGTC 3956 36 100.0 36 .................................... TGACGGAGTACGTAATGTAAGGGATTGCCTTGTACC 3884 36 97.2 37 .........................T.......... CGGTTGGCGCTTGGGCCATGGGTAGCTTCTGGTTCCA 3811 36 100.0 37 .................................... CGGTAGTCCGCGGGGAAGTCCATCGCGCGCTGGAGCT 3738 36 100.0 36 .................................... ACGTCCTCACCGGTCATCAGCCTGTTCCGCGCGATG 3666 36 100.0 34 .................................... GCCCGAAGCAGCGGCAGCTTAGGGTCATTGGCGA 3596 36 100.0 35 .................................... TGTATTGTTCAGCGTCGCCATACGCATCAAGCGGA 3525 36 100.0 35 .................................... TCGAGCGGCGACGTCGTCGGCAACTGCTCCGCCGC 3454 36 100.0 39 .................................... TTCCCTGATTTCAACATGGGCACCTATGAGGAGTGCGCT 3379 36 100.0 36 .................................... CGTTCACCCCCGAGGTGAAAGCCCCGCTGAGTTGAT 3307 36 100.0 38 .................................... ATACGTCTCCTCTGTTGCTGTGGATGTGGCCTAGGACG 3233 36 100.0 34 .................................... AAGGAGCACATGAAATTCACGGGCAACGACAAGG 3163 36 100.0 37 .................................... CCCTTGACGGTGGTGCTGTTTACGGCAACACTGAAGG 3090 36 100.0 35 .................................... CACTGCTTTTGTCTTTCTGTCAGGACCTCGTAGTT 3019 36 100.0 36 .................................... GATACGCTCCAGGCCACCCCGCATCGCAGCCACCTC 2947 36 100.0 39 .................................... ACAGACTCCACGTCGGACGGGAGGGGCAGCTCGTTGAAA 2872 36 100.0 33 .................................... GAAGAGGAGCTGCGCGCCGCGCGGGAGATTATC 2803 36 100.0 36 .................................... CCATGGCCAGCAGGCATCGGGAGGCGCGGGCGTGAA 2731 36 100.0 34 .................................... CGTTCAACCGCGAGGAACGCGCCGTCAGGCAACG 2661 36 100.0 37 .................................... TAGTTGGCGCGGTCCTGCGCAGTCGGAGTGGTGCTGG 2588 36 100.0 36 .................................... CGTCCTTCCAAGTCATCCACGACGCGCTCTGCCGTT 2516 36 100.0 37 .................................... GTGAAATCACGGAGTCGGGAAGCAGCATCCGCCAGCG 2443 36 97.2 0 ........................T........... | ========== ====== ====== ====== ==================================== ========================================== ================== 50 36 99.8 36 GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : TGGCGTGGGTGGAGGCCCGGCGCGCGGACAAACTGGAGCAGAAGCAGGTGTTGGCTGTTTTCGAGACGGATTGGCTTTCGCGGCTGGTCTCCCTGTCCCCCGAGGCTCGCGACGCTGGGGCCAGGGCGCTGCGGTCGCTCGTCAAGAGCCCCAAGCTCGAAGCGCGAAGGGATGCGCTGCTCGCCCGGATGGGGACGGACGTGGAGGGACGCTGAGGGACCTGCTCCCCCCCGTGTAGGGGCGCTGTATGATGAATGACATTCAAGCACCTCGCCGTGGCGGAGGCCCGCGCCCTCGAAATGGACGATTTCCCCTGTTGTTTCGTGGGGTTGAGGCTCTTTGACAGGTGAATAGGTGCATGATCGATGAAAAGCTGAGTGATTCCATGGGGTTCGGATTTCTGGGTAGGGTCCGGGAGGCACAACCCTGGCGAAAGCGGGGGAGGTGCTTGAAAAGGGGGGTGGTAAGTTGGCGGAACTGCTGGGAGATTCAGACGGGCA # Right flank : CCAGGGGCGGGAGTCGAACCCGTACCCGGGAGGAGCGAAACCCCAGCAGGATCGCGCCCTTTCCTCTCAACCTCCTGGACTGCGTTGGATTCGACCTCCCGCCACATCCCCTGCCGTCCCGCCCTGTTCCAGCGCGCTCCGCAGGGGCATGCGACACACGTGCAACATGGCGGGGCCTGAAAGAGATGGGCTTCAACCCGCCTAGAGAGAGGCCGAGTTGCGGATGGCTCGGCCCCTCTTGTTCCTACGATTGGTGCTGGAGCGGCTCCAGTAGCCCCGCGCCGTCCAGCACTTCACGCACGCGGTCAGCAAGTGCCACGTGTTCTGGGTTGCTGACCGTGAAGCGCTCGGGAGTGAGGACGATGAGGGTCCCTTTGTCTCCCACGGGTTCGATGTGGACCGGAGCGGGGAGGGGAGGAATTGTCCCCCGGTGCTGGGCCAGGTACGTCACCCACCCGACGTATGGCGATTTCGGGACGCGCCGAGCCTCAGCAATATCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 90326-95116 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBSK01000006.1 Myxococcus sp. CA027 NODE_6_length_155139_cov_30.6245_ID_48346, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 90326 37 100.0 32 ..................................... CCAGGTGCGGCAGACGCTGGCCCCGTTCGATC 90395 37 100.0 35 ..................................... CTCATGCTCGACGACTCGCACGAAACGCGTAGTCA 90467 37 100.0 33 ..................................... GTGACCGGCAGCAACACCATTACCTTCCGGGTT 90537 37 100.0 33 ..................................... GATGCCTCTGGAGCAGCTGGTGGATCGCTCGAA 90607 37 100.0 32 ..................................... GCGGCCTGAGCGCCTCTTCTCCTGGGGGCTGT 90676 37 100.0 33 ..................................... GGCGTGAACCTGGAATGGGCGTACCGCGCCGAC 90746 37 100.0 32 ..................................... ACGGGCAAACTCCTCGATTCTGAGGACTTTTG 90815 37 100.0 33 ..................................... CTCGCTTGAGGACCCGGAGATTTGGCTGCCGAA 90885 37 100.0 32 ..................................... CCGCATCCACCCAGCGCCTTGTCACAGACGGA 90954 37 100.0 36 ..................................... TCTGACGGCTGGACGGACGAGCGCGTGGAGCTCGTG 91027 37 100.0 33 ..................................... CCATTCAACGCGCCCGACGCATGGTGGTGCGTC 91097 37 100.0 35 ..................................... CTCTGGTGAGTGGCGGCTGTCTGACGCGTCATCTG 91169 37 100.0 34 ..................................... TCTGCTTCGTCGCGTTGCCAGCGGAGCACTGGCC 91240 37 100.0 33 ..................................... AGTTGCCGTCGCTGTCTGGCTCGCCTGCGCAGG 91310 37 100.0 33 ..................................... AGCCCCGGCACCCGCGCGGCCTGGGCGGCGATG 91380 37 100.0 35 ..................................... CGGTGAACACCACCTCGCCGCTGGCTGCGACGATG 91452 37 100.0 36 ..................................... ATGACAAGGCGCTGGCGCCACGTGCTCCATGGCGAG 91525 37 100.0 32 ..................................... TCACTGCCGGGCCCGCCCTACTCCAGCGGCCC 91594 37 100.0 36 ..................................... AACCAGGCGCTCACGTGAGCGCCGCATCCAAGGAGA 91667 37 100.0 35 ..................................... GATGAACCTCTCGCCGGGCCGCTCCATAACGGCGA 91739 37 100.0 35 ..................................... TCTTCGCGCTTGGCCTGGTCGGTCTTGGGCAGCCA 91811 37 100.0 34 ..................................... CATCCGCGCAACGGACGTCTGGAACTCGTCGAAA 91882 37 100.0 32 ..................................... TCTCCACTGCTGACACTCACCACGAGCGCCCG 91951 37 100.0 35 ..................................... GCTTGCGGCCCCCGGGCTCCTTTTTCCACCCCCAC 92023 37 100.0 34 ..................................... GACTCGCCCACCTCACCCCGACACCCGCACAAGA 92094 37 100.0 34 ..................................... AGGCGCTCAAGCGGGGCGTGAAGAAGCACGGGAA 92165 37 100.0 33 ..................................... TACAGCGGGGTGTGCTCTTCGCACGGCGAGGCG 92235 37 100.0 34 ..................................... CGCCCGGCTCCCCAATCTGCGGTCGACCCTCGGT 92306 37 100.0 35 ..................................... ACGTCAGGCGAGAAGATGAGGTCCAGCGGCAGGTC 92378 37 100.0 34 ..................................... GTGGACACGGGCCCCGCGGTCAATCCCGATGCGC 92449 37 100.0 35 ..................................... GGTGATGGCGTCGGGGACGAGATTTGCAGCCTGGG 92521 37 100.0 33 ..................................... AGCCCGATGCCGCGCGACTACGCTGGGCCCGGT 92591 37 100.0 35 ..................................... CACTACGCCCCGCCCGGCAGTGCCTGACGCGCCTG 92663 37 100.0 34 ..................................... GCGCTCCAGGCTGACGGGTGGTGGCTCCGCTCGG 92734 37 100.0 33 ..................................... TCCAACCGCCGGAACAACGCGAAGTCGGACGCG 92804 37 100.0 35 ..................................... ACCGGCCTGGGCTGGCGGGATGCTTCCAGGACGCG 92876 37 100.0 34 ..................................... ATGCAGATGCACGGGGCCCGGTTTCGGCTTGCCC 92947 37 100.0 34 ..................................... GGCGTTACGCTCGACTATCGAGCGGACGTTGTCA 93018 37 100.0 34 ..................................... GGAGTCTGTCGGCCGCGCTGACGCGAGGCCGGCG 93089 37 100.0 34 ..................................... GGGCGCTGGGTGAAGGACTTGAAGGGCCGCTACT 93160 37 100.0 34 ..................................... GTCGACGCCGTCGAGGCGAAGAAGCCGGCCAAGC 93231 37 100.0 32 ..................................... GTGGACTGGCCGCATGGGGGCCGGCGTCCTGG 93300 37 100.0 36 ..................................... TCTAACCTTGTCATAAATCCGCATCATCCACGTGTC 93373 37 100.0 34 ..................................... CGAAGTCCGCGCGGATGGCGTCATGCGCCTTGGT 93444 37 100.0 36 ..................................... TTCGCCTGGCCCGTCGCCTCGGCGTACCGGCGGAGG 93517 37 100.0 34 ..................................... GGCATCCCCGCGCGCAGCCACGCCAGGACGTCGT 93588 37 100.0 34 ..................................... CTGTTGTGCCAGTCGTCCGCGTCGTCGGGGGTCA 93659 37 100.0 33 ..................................... CACCACCCCCTGCGCCGGGGCGGGCGGGGGCTG 93729 37 100.0 35 ..................................... ACGGACTTGAAGTCGTTGCCGTCCATGATCACGTG 93801 37 100.0 34 ..................................... AGCCAGAGTCCAGAGCTCGACCGGTGGGGCCGGC 93872 37 100.0 34 ..................................... AAGGAGTCCGAGGTCGCCACGGTGTTCGATGCCG 93943 37 97.3 33 ..................A.................. CGTTCGGAGGGGCAGGAGCAGAGCGCCACGGCG 94015 37 100.0 34 ..................................... TCCGCCAGCTCCAGCACGAGTTCCAACTTCGACT 94086 37 97.3 33 ..T.................................. TTGGGGTCCGCGTTCTCAACCTCCGCAGCCTTG 94156 37 100.0 34 ..................................... TTACGCGACATGCAACGCGGCGCGCTCGACCAGG 94227 37 100.0 35 ..................................... ACCGGCGTAGAGCTGGGGAAGCACGGGCAGGGCAC 94299 37 100.0 35 ..................................... ACCGGGCGCTTCCGCGAGGGCTTCGGCGAGCTCGG 94371 37 100.0 32 ..................................... CGAGCAGTGGCAGCGCCCGTGCATCGGCCCAT 94440 37 100.0 36 ..................................... AGCGTGGAGCGCAACTCCGGGGTGGACCCGAACAAG 94513 37 100.0 36 ..................................... CCGTGAGTAGTTGCTGGACTGCGAACTCAAGCTCAA 94586 37 97.3 36 .........................A........... TACTCCCGCTTGGTGGACAACCTCTCCGGCCCCGCG 94659 37 100.0 33 ..................................... TTCCCGACGTTGGCCACCGTGTTGATGCCGCTG 94729 37 97.3 33 ...................A................. ACGCAGAAGCGCGAGCCCGTCTACGACGCGCTG 94799 37 97.3 34 ...................A................. ATGTCGCTCGACATGAAGGAGTTGTCGGGCTTCA 94870 37 97.3 32 ...................A................. CCCGCGTACCCGCGTGATGCGGGCGGCGAGCG 94939 37 86.5 34 ...........C.TT.A..A................. GTCTCCGCGGAGCTCTCCGCGTCGCCCTGACGTC 95010 37 89.2 33 .........T..T......A................G CTTGCTTGGATGGAGCAGGTAGAACTGACTACC 95080 37 91.9 0 ........G.A.....T.................... | ========== ====== ====== ====== ===================================== ==================================== ================== 68 37 99.3 34 GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : TCCCTTCGTGATGCGCTGATGCGTAGATTGACCGTGTTGATTTGTTACGACGTGCGGGTGTCGGACCCCCAGGGGCCTCGGCGCCTGCGCAAGATTGCGCGGGCTTGCAGAGACCATGGCGTGCGAGTGCAATACTCCGTCTTCGAGTGTGTCCTGGAGCCCAAGGACTGGATCGTCCTGCGCGCCCGCCTGCTCGGCGCATTCGATTCGGAATGCGACAGCCTGCGCTTCTACTTCCTGTCGGAAGACGATGCCCGAAAGACGGAGCATCATGGCGCCAGGGCACCCCTGGACGTCGAGGGGCCGCTGGTCCTGTAGGCCTCCGCGAACCTATCCCGGTGTACGCTCCGCCGAGGGTTCGCGCTCATTGAAATCCCGAATAGAATCATGGAGTTGGGTGAGTGCGGGGCAGGAACGGCGGGGCGCTTTCGTTGCCCCGCGGGCCGGTTCGCGAAATTCGGCCGGATTCCGTAGTCAGAACAGTATGTTGGAAGGGCAGG # Right flank : CGCCCACGACGTCGTGGGTGGCATCAGCCGCGCCAGTCGCTCCTCGTGAACGCGAGGACTCTCTCTCTTCAACAGGTCCGAAAATTGGGGAGCAGATCACGAGGACTCGCTCGTGCTCAGGCTCCAGAAGTCACCGGGCATGCCCAATACACGGCACTTCTGGCTTGAGGTCTTCGGGGATGCCCGTTTCAAGCGCAACGGCTCGTTCCTATCCGACGTGAACGCGGCCAACGCCCATCGGCTCACGACGTTGCTCATCGCCGTGAGCCGGCTGGACGAATTCAAGGAGGATCGCAGCGCCCCTCCTCCCTTCGCACATGGCCGGCAGGTGACGACGTTCGAATTCACCGTGGACGGCCGGCGCACGGGTCTGACGTTGGACAGCGACACGCCGCCCGACATCCTCCGCTTCATGCAGCAGGAGGCTGCCGCTTACGGCATCGAACTTTGAGCGCGAGGACCCCGGGCGCCCCAGGGCCGGAGGAACACCTCCGTCTCCT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-30] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //