Array 1 3332041-3333929 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUEL01000004.1 [Ruminococcus] gnavus ATCC 29149 Ruminococcus_gnavus.1cell.HGAP3_contig4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 3332041 32 100.0 38 ................................ ATCATTTGCAATCAAATCACAGACGGAGCAGGCGGCAA 3332111 32 100.0 34 ................................ GATGTGTGGTTGAATCACGTTCGAGAACTGAGGG 3332177 32 100.0 34 ................................ CCCGGTGCCTTATCCTGTGAATCTACTCCATCAC 3332243 32 100.0 34 ................................ AAATCTGGCGATCTCGGATTATATGAATATCGAG 3332309 32 100.0 33 ................................ AAACCTATCATTATCCGTATTTCCTTTCGATTC 3332374 32 100.0 34 ................................ TTGCAGATGTTTTGCTCGTATCGTCCAGAAACAT 3332440 32 100.0 34 ................................ TATAAATCCGCCCAATTCTCCCTCTGCTACATCA 3332506 32 100.0 35 ................................ TTGTTGAATCTTTCTTGTCATTTGTTTCCTTATCT 3332573 32 100.0 33 ................................ CTGTCGATTATGAGCCGGGGATTGTCCAAAGAC 3332638 32 100.0 35 ................................ AGTGAATAATCATCATTTAACACAGTCTGGAACTC 3332705 32 100.0 35 ................................ AGAACTTAATCAAAAAGAAAGGAGTGATTGATACG 3332772 32 100.0 35 ................................ CTCATCGGTCAGAATAGAGTCATTGAACTTGCAAG 3332839 32 100.0 35 ................................ AAGGTGATGCAGGGGCTTACGTGGGATGAAGTGGC 3332906 32 100.0 35 ................................ ATTCCACGGTACAGCTTGTTTTTGAGTTTCGGAAG 3332973 32 100.0 37 ................................ CCCATCCCGTGTGTTTAGGGATCAGGTCGGGAAAAAC 3333042 32 100.0 33 ................................ GTCTTAGGTTGTTTAAGGTGTGTAACCATCCAC 3333107 32 100.0 33 ................................ CTCGGTATACTGCTGCCGATAGTCTCCATACAG 3333172 32 100.0 33 ................................ AGCATAACCTTCCAACTTTTCCTCTACGCCTGT 3333237 32 100.0 34 ................................ CCCCAACTGTAGCATGGCATATCCTTTCCAAAGT 3333303 32 100.0 34 ................................ GAAAGTACGGCACAAGAAATCCACTTGAGATTGT 3333369 32 100.0 34 ................................ CCAGAGTTTTTGATCTCCTGCGGATATTCTGGGC 3333435 32 100.0 35 ................................ TCAACATTCCATAGCTAAAATCAATACCATAGGCC 3333502 32 100.0 33 ................................ ATGGTTGTGAGTGATATCGTAGCTTACCGGAAC 3333567 32 100.0 33 ................................ AAGTTCCGGTTGCCAGAAGGGATGATCCTGACA 3333632 32 100.0 36 ................................ ATGTCACGTTCGATTGTGTATTCGAACGCATCCAAG 3333700 32 100.0 34 ................................ CAGTCCATAAGCGCAAGCTCCGGATACTCTTCCA 3333766 32 100.0 35 ................................ CAAACATACCAGTTGTACATAAATTACTATCACAA 3333833 32 100.0 33 ................................ CAGGCGGGACTTTCGGATAATTGGATCCATTAA 3333898 31 90.6 0 ........................-.G..T.. | T [3333926] ========== ====== ====== ====== ================================ ====================================== ================== 29 32 99.7 34 GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT # Left flank : ATCCGGTATTTCTCTGGAAATGAGGCGAAAATGGGATGTTAGTGTTGATTACATATGATGTGAACACAGAAACAGCGGCTGGAAAGAGGAGATTGCGCCAAGTGGCAAAACAGTGTGTAAATTATGGGAGAAGAGTGCAAAATTCTGTATTCGAATGTATCTTAGATAATGCACAGTGTGTTATGCTTAAGGCAAAACTGACAGATATCATCGATGAAGAAGTTGATAGTTTGAGATTTTATTACTTGGGAAATCAATATAAAACAAAAGTCGAACATGTTGGTGTAGACAGAGGAATTTCGGCGGATGGAATTCTTATTATGTAACTGGGGTGCGGATGATAAGCAAACATAAAAATGCTGGGAGATTCGCACCAAAAAAATGCACAAAAATTAGTTGAAGAGGTGAAAGTTAGAGAAATATGATGAGGAAAAGAGAATGATATTGGTAGAATTGAGTAATATTAAAGAATATAAAGCCTAAAATTAGGCAAAATTGCT # Right flank : TGTGGTGGACGGGCTGCCGGAAGATGCCGATGATTTCCGGTATCCGGGAGATGCGATCGAACCGGAAATACAATCGGAGTTGGAACGTGCATTAAGCGGGGAAACGGTATTGCCGGAGAAGATTCTGGATACAGACTGGGGAAATATTTTTATTGCTTATTATCCGTTGTATAATGAATCAGGAGAAGTCATCGGTGCACTTGGAATAGAAGTTGCGGCAGATATAGAAGCCGAGGCGGTACATGACAAATCCATTATACAGAGACATGGCAAATACTGATTTTATGACAGAACTAAAGAACAGAAATTCTTATGAGACAGACCGGCAGAACCTGGATGCAAAGAAGAAATGGAATGGCCTGACAGTGGCAGTGATCGATGTGAACAATCTGAAGCTGGTAAATGATCGGCTGGGGCATGCTGTGGGTGATGATTGTATTGTGAATGCAGCACGGGTCCTGCAGAGTGTTGAATCTCAAAAAGTTACGGCGTATCGATAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //